Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:22 (17319): wrapper (7.7.26015): starting
16:53:22 (17319): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 16:53:22] Arguments: --nthreads 12
[2026-03-05 16:53:22] Threads: 12
[2026-03-05 16:53:22] Checking for CVMFS
[2026-03-05 16:53:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 16:53:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 16:53:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 16:53:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 16:53:22] 2.11.2.0 2979 430821 98932 156933 3 52 16607943 20275201 1 130560 1 183419729 99.957 24143518 17482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-05 16:53:22] CVMFS is ok
[2026-03-05 16:53:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 16:53:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 16:53:22] Further information can be found at the LHC@home message board.
[2026-03-05 16:53:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 16:53:22] Checking for apptainer binary...
[2026-03-05 16:53:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 16:53:22] Running /usr/bin/apptainer --version
[2026-03-05 16:53:22] apptainer version 1.3.2-1.el7
[2026-03-05 16:53:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 16:53:24] c-205-21.aglt2.org
[2026-03-05 16:53:24] apptainer works
[2026-03-05 16:53:24] Set ATHENA_PROC_NUMBER=12
[2026-03-05 16:53:24] Set ATHENA_CORE_NUMBER=12
[2026-03-05 16:53:24] Starting ATLAS job with PandaID=7038693978
[2026-03-05 16:53:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 18:00:58]  *** The last 200 lines of the pilot log: ***
[2026-03-05 18:00:58]  domain=
[2026-03-05 18:00:58]  filesize=414905
[2026-03-05 18:00:58]  filetype=log
[2026-03-05 18:00:58]  guid=ae96649e-6d34-4116-ab3e-c116560e00da
[2026-03-05 18:00:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 18:00:58]  is_altstaged=None
[2026-03-05 18:00:58]  is_tar=False
[2026-03-05 18:00:58]  lfn=log.48955006._009697.job.log.tgz.1
[2026-03-05 18:00:58]  mtime=0
[2026-03-05 18:00:58]  protocol_id=None
[2026-03-05 18:00:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 18:00:58]  replicas=None
[2026-03-05 18:00:58]  scope=mc23_13p6TeV
[2026-03-05 18:00:58]  status=None
[2026-03-05 18:00:58]  status_code=0
[2026-03-05 18:00:58]  storage_token=
[2026-03-05 18:00:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038693978/log.48955006._009697.job.log.tgz.1
[2026-03-05 18:00:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/88/log.48955006._009697.job.log.tgz.1
[2026-03-05 18:00:58]  workdir=None
[2026-03-05 18:00:58] ]
[2026-03-05 18:00:58] 2026-03-05 23:00:25,357 | INFO     | transferring file log.48955006._009697.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038693978/log.48955006._009697.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 18:00:58] 2026-03-05 23:00:25,357 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038693978/log.48955006._009697.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._009697.job
[2026-03-05 18:00:58] 2026-03-05 23:00:25,380 | INFO     | adding to output.list: log.48955006._009697.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/88/log.48955006._009697.job.log.tg
[2026-03-05 18:00:58] 2026-03-05 23:00:25,380 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 18:00:58] 2026-03-05 23:00:25,381 | INFO     | summary of transferred files:
[2026-03-05 18:00:58] 2026-03-05 23:00:25,381 | INFO     |  -- lfn=log.48955006._009697.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 18:00:58] 2026-03-05 23:00:25,381 | INFO     | stage-out finished correctly
[2026-03-05 18:00:58] 2026-03-05 23:00:25,793 | INFO     | monitor loop #305: job 0:7038693978 is in state 'finished'
[2026-03-05 18:00:58] 2026-03-05 23:00:25,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 18:00:58] 2026-03-05 23:00:26,027 | INFO     | time since job start (4001s) is within the limit (349056.0s)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,846 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 18:00:58] 2026-03-05 23:00:27,926 | INFO     | job 7038693978 has state=finished
[2026-03-05 18:00:58] 2026-03-05 23:00:27,926 | INFO     | preparing for final server update for job 7038693978 in state='finished'
[2026-03-05 18:00:58] 2026-03-05 23:00:27,927 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038693978/jobReport.json
[2026-03-05 18:00:58] 2026-03-05 23:00:27,929 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-05 18:00:58] 2026-03-05 23:00:27,930 | INFO     | this job has now completed (state=finished)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,930 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,930 | INFO     | log transfer has been attempted: DONE
[2026-03-05 18:00:58] 2026-03-05 23:00:27,930 | INFO     | job 7038693978 has finished - writing final server update
[2026-03-05 18:00:58] 2026-03-05 23:00:27,931 | INFO     | total number of processed events: 400 (read)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,932 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038693978/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,933 | INFO     | extracted standard info from prmon json
[2026-03-05 18:00:58] 2026-03-05 23:00:27,933 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 18:00:58] 2026-03-05 23:00:27,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 18:00:58] 2026-03-05 23:00:27,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 18:00:58] 2026-03-05 23:00:27,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 18:00:58] 2026-03-05 23:00:27,935 | INFO     | fitting pss+swap vs Time
[2026-03-05 18:00:58] 2026-03-05 23:00:27,935 | INFO     | sum of square deviations: 63666310.0
[2026-03-05 18:00:58] 2026-03-05 23:00:27,935 | INFO     | sum of deviations: -5435715002.000002
[2026-03-05 18:00:58] 2026-03-05 23:00:27,935 | INFO     | mean x: 1772749723.0
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | mean y: 2747114.0169491526
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | intersect: 151356929005.54556
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | chi2: 0.049160932584594884
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | current memory leak: -85.38 B/s (using 59 data points, chi2=0.05)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-05 18:00:58] 2026-03-05 23:00:27,936 | INFO     | ..............................
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . Timing measurements:
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . get job = 0 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . initial setup = 7 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . payload setup = 7 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . stage-in = 0 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . payload execution = 3976 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . stage-out = 0 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | . log creation = 0 s
[2026-03-05 18:00:58] 2026-03-05 23:00:27,937 | INFO     | ..............................
[2026-03-05 18:00:58] 2026-03-05 23:00:28,015 | INFO     | 
[2026-03-05 18:00:58] 2026-03-05 23:00:28,015 | INFO     | job summary report
[2026-03-05 18:00:58] 2026-03-05 23:00:28,015 | INFO     | --------------------------------------------------
[2026-03-05 18:00:58] 2026-03-05 23:00:28,015 | INFO     | PanDA job id: 7038693978
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | task id: 48955006
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | errors: (none)
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | pilot state: finished 
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | transexitcode: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:28,016 | INFO     | exeerrorcode: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | exeerrordiag: 
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | exitcode: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | exitmsg: OK
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | cpuconsumptiontime: 42745 s
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | nevents: 400
[2026-03-05 18:00:58] 2026-03-05 23:00:28,017 | INFO     | neventsw: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | pid: 25441
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | pgrp: 25441
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | corecount: 12
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | event service: False
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | sizes: {0: 2295801, 11: 2295801, 3987: 2321629, 3989: 2330627, 3991: 2330877}
[2026-03-05 18:00:58] 2026-03-05 23:00:28,018 | INFO     | --------------------------------------------------
[2026-03-05 18:00:58] 2026-03-05 23:00:28,019 | INFO     | 
[2026-03-05 18:00:58] 2026-03-05 23:00:28,019 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 18:00:58] 2026-03-05 23:00:28,033 | INFO     | time since job start (4003s) is within the limit (349056.0s)
[2026-03-05 18:00:58] 2026-03-05 23:00:28,043 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,043 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 18:00:58] 2026-03-05 23:00:28,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,047 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 18:00:58] 2026-03-05 23:00:28,047 | INFO     | job 7038693978 has completed (purged errors)
[2026-03-05 18:00:58] 2026-03-05 23:00:28,047 | INFO     | overall cleanup function is called
[2026-03-05 18:00:58] 2026-03-05 23:00:29,056 | INFO     | --- collectZombieJob: --- 10, [25441]
[2026-03-05 18:00:58] 2026-03-05 23:00:29,056 | INFO     | zombie collector waiting for pid 25441
[2026-03-05 18:00:58] 2026-03-05 23:00:29,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 18:00:58] 2026-03-05 23:00:29,056 | INFO     | collected zombie processes
[2026-03-05 18:00:58] 2026-03-05 23:00:29,056 | INFO     | will attempt to kill all subprocesses of pid=25441
[2026-03-05 18:00:58] 2026-03-05 23:00:29,144 | INFO     | process IDs to be killed: [25441] (in reverse order)
[2026-03-05 18:00:58] 2026-03-05 23:00:29,205 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 18:00:58] 2026-03-05 23:00:29,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 18:00:58] 2026-03-05 23:00:29,209 | INFO     | did not find any defunct processes belonging to 25441
[2026-03-05 18:00:58] 2026-03-05 23:00:29,212 | INFO     | did not find any defunct processes belonging to 25441
[2026-03-05 18:00:58] 2026-03-05 23:00:29,212 | INFO     | ready for new job
[2026-03-05 18:00:58] 2026-03-05 23:00:29,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 18:00:58] 2026-03-05 23:00:29,213 | INFO     | **************************************
[2026-03-05 18:00:58] 2026-03-05 23:00:29,214 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 18:00:58] 2026-03-05 23:00:29,214 | INFO     | **************************************
[2026-03-05 18:00:58] 2026-03-05 23:00:29,214 | INFO     | 
[2026-03-05 18:00:58] 2026-03-05 23:00:29,215 | INFO     | architecture information:
[2026-03-05 18:00:58] 2026-03-05 23:00:29,215 | INFO     | executing command: cat /etc/os-release
[2026-03-05 18:00:58] 2026-03-05 23:00:29,231 | INFO     | cat /etc/os-release:
[2026-03-05 18:00:58] NAME="CentOS Linux"
[2026-03-05 18:00:58] VERSION="7 (Core)"
[2026-03-05 18:00:58] ID="centos"
[2026-03-05 18:00:58] ID_LIKE="rhel fedora"
[2026-03-05 18:00:58] VERSION_ID="7"
[2026-03-05 18:00:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 18:00:58] ANSI_COLOR="0;31"
[2026-03-05 18:00:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 18:00:58] HOME_URL="https://www.centos.org/"
[2026-03-05 18:00:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 18:00:58] 
[2026-03-05 18:00:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 18:00:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 18:00:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 18:00:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 18:00:58] 
[2026-03-05 18:00:58] 2026-03-05 23:00:29,231 | INFO     | **************************************
[2026-03-05 18:00:58] 2026-03-05 23:00:29,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 18:00:58] 2026-03-05 23:00:29,750 | INFO     | sufficient remaining disk space (28902948864 B)
[2026-03-05 18:00:58] 2026-03-05 23:00:29,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 18:00:58] 2026-03-05 23:00:29,751 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 18:00:58] 2026-03-05 23:00:29,751 | INFO     | update_server=False
[2026-03-05 18:00:58] 2026-03-05 23:00:29,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 18:00:58] 2026-03-05 23:00:29,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 18:00:58] 2026-03-05 23:00:29,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 18:00:58] 2026-03-05 23:00:29,752 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-05 18:00:58] 2026-03-05 23:00:29,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 18:00:58] 2026-03-05 23:00:29,752 | INFO     | aborting loop
[2026-03-05 18:00:58] 2026-03-05 23:00:29,753 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 18:00:58] 2026-03-05 23:00:29,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 18:00:58] 2026-03-05 23:00:29,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 18:00:58] 2026-03-05 23:00:29,792 | INFO     | all data control threads have been joined
[2026-03-05 18:00:58] 2026-03-05 23:00:30,319 | INFO     | all payload control threads have been joined
[2026-03-05 18:00:58] 2026-03-05 23:00:30,426 | INFO     | all job control threads have been joined
[2026-03-05 18:00:58] 2026-03-05 23:00:30,757 | INFO     | [job] retrieve thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,759 | INFO     | [job] queue monitor thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,759 | INFO     | [job] job monitor thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,798 | INFO     | [data] control thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,873 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,874 | INFO     | [data] copytool_in thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:30,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 18:00:58] 2026-03-05 23:00:31,042 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,325 | INFO     | [payload] control thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,430 | INFO     | [job] control thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,521 | INFO     | [payload] validate_post thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,848 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,894 | INFO     | [payload] failed_post thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:31,937 | INFO     | [job] validate thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:32,002 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:32,983 | INFO     | [data] copytool_out thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:33,757 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 18:00:58] 2026-03-05 23:00:51,103 | INFO     | [monitor] cgroup control has ended
[2026-03-05 18:00:58] 2026-03-05 23:00:53,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294862956352)>', '<ExcThread(monitor, started 140294259451648)>']
[2026-03-05 18:00:58] 2026-03-05 23:00:53,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 18:00:58] 2026-03-05 23:00:53,871 | INFO     | [monitor] control thread has ended
[2026-03-05 18:00:58] 2026-03-05 23:00:58,141 | INFO     | all workflow threads have been joined
[2026-03-05 18:00:58] 2026-03-05 23:00:58,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 18:00:58] 2026-03-05 23:00:58,142 | INFO     | traces error code: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:58,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 18:00:58] 2026-03-05 23:00:58,231 [wrapper] ==== pilot stdout END ====
[2026-03-05 18:00:58] 2026-03-05 23:00:58,235 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 18:00:58] 2026-03-05 23:00:58,239 [wrapper] pilotpid: 21008
[2026-03-05 18:00:58] 2026-03-05 23:00:58,243 [wrapper] Pilot exit status: 0
[2026-03-05 18:00:58] 2026-03-05 23:00:58,257 [wrapper] pandaids: 7038693978
[2026-03-05 18:00:58] 2026-03-05 23:00:58,296 [wrapper] cleanup supervisor_pilot 11681 21009
[2026-03-05 18:00:58] 2026-03-05 23:00:58,300 [wrapper] Test setup, not cleaning
[2026-03-05 18:00:58] 2026-03-05 23:00:58,304 [wrapper] apfmon messages muted
[2026-03-05 18:00:58] 2026-03-05 23:00:58,307 [wrapper] ==== wrapper stdout END ====
[2026-03-05 18:00:58] 2026-03-05 23:00:58,311 [wrapper] ==== wrapper stderr END ====
[2026-03-05 18:00:58]  *** Error codes and diagnostics ***
[2026-03-05 18:00:58]     "exeErrorCode": 0,
[2026-03-05 18:00:58]     "exeErrorDiag": "",
[2026-03-05 18:00:58]     "pilotErrorCode": 0,
[2026-03-05 18:00:58]     "pilotErrorDiag": "",
[2026-03-05 18:00:58]  *** Listing of results directory ***
[2026-03-05 18:00:58] total 615784
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas    584627 Mar  5 12:40 pilot3.tar.gz
[2026-03-05 18:00:58] -rwx------ 1 boincer umatlas     36322 Mar  5 12:42 runpilot2-wrapper.sh
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas      5111 Mar  5 12:46 queuedata.json
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas       100 Mar  5 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 18:00:58] -rwxr-xr-x 1 boincer umatlas      7986 Mar  5 16:53 run_atlas
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas       105 Mar  5 16:53 job.xml
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas 440312954 Mar  5 16:53 EVNT.46701403._000194.pool.root.1
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 16:53 start_atlas.sh
[2026-03-05 18:00:58] drwxrwx--x 2 boincer umatlas      4096 Mar  5 16:53 shared
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas    597956 Mar  5 16:53 input.tar.gz
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas         0 Mar  5 16:53 boinc_lockfile
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas      2562 Mar  5 16:53 pandaJob.out
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas        57 Mar  5 16:53 setup.sh.local
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas    998552 Mar  5 16:53 agis_schedconf.cvmfs.json
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas   1521291 Mar  5 16:53 agis_ddmendpoints.agis.ALL.json
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas       445 Mar  5 16:53 workernode_map.json
[2026-03-05 18:00:58] drwx------ 5 boincer umatlas      4096 Mar  5 16:53 pilot3
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas      5953 Mar  5 17:57 init_data.xml
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas        95 Mar  5 17:59 pilot_heartbeat.json
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas 184302078 Mar  5 17:59 HITS.48955006._009697.pool.root.1
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas       530 Mar  5 18:00 boinc_task_state.xml
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas      1046 Mar  5 18:00 memory_monitor_summary.json
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas    414905 Mar  5 18:00 log.48955006._009697.job.log.tgz.1
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas      6419 Mar  5 18:00 heartbeat.json
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 18:00 boinc_mmap_file
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas        27 Mar  5 18:00 wrapper_checkpoint.txt
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas      4548 Mar  5 18:00 pilotlog.txt
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas    588870 Mar  5 18:00 log.48955006._009697.job.log.1
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas       357 Mar  5 18:00 output.list
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas       620 Mar  5 18:00 runtime_log
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas   1024000 Mar  5 18:00 result.tar.gz
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas      9343 Mar  5 18:00 runtime_log.err
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas       659 Mar  5 18:00 GGDMDm5tRI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmaOLDmAy1nWn.diag
[2026-03-05 18:00:58] -rw-r--r-- 1 boincer umatlas     21032 Mar  5 18:00 stderr.txt
[2026-03-05 18:00:58] HITS file was successfully produced:
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas 184302078 Mar  5 17:59 shared/HITS.pool.root.1
[2026-03-05 18:00:58]  *** Contents of shared directory: ***
[2026-03-05 18:00:58] total 611584
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas 440312954 Mar  5 16:53 ATLAS.root_0
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 16:53 start_atlas.sh
[2026-03-05 18:00:58] -rw-r--r-- 2 boincer umatlas    597956 Mar  5 16:53 input.tar.gz
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas 184302078 Mar  5 17:59 HITS.pool.root.1
[2026-03-05 18:00:58] -rw------- 1 boincer umatlas   1024000 Mar  5 18:00 result.tar.gz
18:00:59 (17319): run_atlas exited; CPU time 42727.856164
18:00:59 (17319): called boinc_finish(0)

</stderr_txt>
]]>

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