Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 15:33:29 (14644): vboxwrapper version 26210
2026-03-05 15:33:29 (14644): BOINC client version: 8.2.8
2026-03-05 15:33:29 (14644): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-05 15:33:30 (14644): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 15:33:30 (14644): Create VM. (boinc_3f5112db5e6695ca, slot#3)
2026-03-05 15:33:30 (14644): Setting Memory Size for VM. (4800MB)
2026-03-05 15:33:31 (14644): Setting CPU Count for VM. (8)
2026-03-05 15:33:31 (14644): Setting Chipset Options for VM.
2026-03-05 15:33:31 (14644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 15:33:32 (14644): Setting Boot Options for VM.
2026-03-05 15:33:32 (14644): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 15:33:32 (14644): Enabling VM Network Access.
2026-03-05 15:33:33 (14644): Disabling USB Support for VM.
2026-03-05 15:33:33 (14644): Disabling COM Port Support for VM.
2026-03-05 15:33:33 (14644): Disabling LPT Port Support for VM.
2026-03-05 15:33:33 (14644): Disabling Audio Support for VM.
2026-03-05 15:33:34 (14644): Disabling Clipboard Support for VM.
2026-03-05 15:33:34 (14644): Disabling Drag and Drop Support for VM.
2026-03-05 15:33:34 (14644): Adding storage controller(s) to VM.
2026-03-05 15:33:34 (14644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 15:33:35 (14644): Adding VirtualBox Guest Additions to VM.
2026-03-05 15:33:35 (14644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 15:33:35 (14644): forwarding host port 55279 to guest port 80
2026-03-05 15:33:36 (14644): Enabling remote desktop for VM.
2026-03-05 15:33:36 (14644): Required extension pack not installed, remote desktop not enabled.
2026-03-05 15:33:36 (14644): Enabling shared directory for VM.
2026-03-05 15:33:37 (14644): Starting VM using VBoxManage interface. (boinc_3f5112db5e6695ca, slot#3)
2026-03-05 15:33:43 (14644): Successfully started VM. (PID = '26808')
2026-03-05 15:33:43 (14644): Reporting VM Process ID to BOINC.
2026-03-05 15:33:43 (14644): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-05 15:33:43 (14644): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 15:33:43 (14644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 15:33:43 (14644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 15:33:43 (14644): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 15:33:43 (14644): Detected: Web Application Enabled (http://localhost:55279)
2026-03-05 15:33:43 (14644): Preference change detected
2026-03-05 15:33:43 (14644): Setting CPU throttle for VM. (50%)
2026-03-05 15:33:43 (14644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 15:33:45 (14644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 15:33:45 (14644): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 15:33:48 (14644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 15:33:48 (14644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 15:33:48 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 15:33:55 (14644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 15:33:55 (14644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 15:34:01 (14644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000076 main     Log opened 2026-03-05T15:33:59.776881000Z
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000146 main     OS Product: Linux
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000193 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000223 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000248 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000248 main     Process ID: 1370
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000249 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 15:34:01 (14644): Guest Log: 00:00:00.000970 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 15:34:01 (14644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 15:34:01 (14644): Guest Log: [INFO] Mounting shared directory
2026-03-05 15:34:01 (14644): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 15:34:08 (14644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 15:34:08 (14644): Guest Log: [INFO] Detected branch: prod
2026-03-05 15:34:08 (14644): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 15:34:08 (14644): Guest Log: Copying input files
2026-03-05 15:34:10 (14644): Guest Log: Copied input files into RunAtlas.
2026-03-05 15:34:10 (14644): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 15:34:10 (14644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 15:34:10 (14644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 15:34:10 (14644): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 15:34:11 (14644): Guest Log: 00:00:10.004045 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 610 884 612 000ns (GuestNow=1 772 746 450 663 218 000 ns GuestLast=1 772 724 839 778 606 000 ns fSetTimeLastLoop=true )
2026-03-05 15:34:20 (14644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 15:34:20 (14644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 15:34:20 (14644): Guest Log: 2.6.3.0 1675 0 32208 156933 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 15:34:21 (14644): Guest Log: copied the webapp to /var/www
2026-03-05 15:34:21 (14644): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-05 15:34:21 (14644): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-05 15:34:21 (14644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 15:34:21 (14644): Guest Log:  *** Starting ATLAS job. (PandaID=7042020654 taskID=48929183) ***
2026-03-05 17:13:46 (14644): Status Report: Elapsed Time: '6000.000000'
2026-03-05 17:13:46 (14644): Status Report: CPU Time: '26538.843750'
2026-03-05 17:51:29 (14644): Guest Log:  *** Job finished ***
2026-03-05 17:51:29 (14644): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:14,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:14,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:22,782 | INFO     | [monitor] cgroup control has ended
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:23,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935886837568)>', '<ExcThread(monitor, started 139934849554176)>']
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:23,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:23,961 | INFO     | [monitor] control thread has ended
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,114 | INFO     | all workflow threads have been joined
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,114 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,114 | INFO     | traces error code: 0
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,166 [wrapper] ==== pilot stdout END ====
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,170 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,175 [wrapper] pilotpid: 6095
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,178 [wrapper] Pilot exit status: 0
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,271 [wrapper] pandaids: 7042020654
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,290 [wrapper] cleanup supervisor_pilot 26739 6096
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,296 [wrapper] Test setup, not cleaning
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,299 [wrapper] apfmon messages muted
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,302 [wrapper] ==== wrapper stdout END ====
2026-03-05 17:51:29 (14644): Guest Log: 2026-03-05 23:51:28,304 [wrapper] ==== wrapper stderr END ====
2026-03-05 17:51:29 (14644): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 17:51:29 (14644): Guest Log:     "exeErrorCode": 0,
2026-03-05 17:51:29 (14644): Guest Log:     "exeErrorDiag": "",
2026-03-05 17:51:29 (14644): Guest Log:     "pilotErrorCode": 0,
2026-03-05 17:51:29 (14644): Guest Log:     "pilotErrorDiag": "",
2026-03-05 17:51:29 (14644): Guest Log:  *** Listing of results directory ***
2026-03-05 17:51:29 (14644): Guest Log: total 191204
2026-03-05 17:51:29 (14644): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 17:40 queuedata.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 17:40 pilot3.tar.gz
2026-03-05 17:51:29 (14644): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 17:40 runpilot2-wrapper.sh
2026-03-05 17:51:29 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas      8525 Mar  5 21:34 init_data.xml
2026-03-05 17:51:29 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas    597954 Mar  5 21:34 input.tar.gz
2026-03-05 17:51:29 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 21:34 start_atlas.sh
2026-03-05 17:51:29 (14644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 21:34 EVNT.48929179._000005.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 17:51:29 (14644): Guest Log: -rw-r--r--. 1 atlas atlas      2588 Mar  5 21:34 pandaJob.out
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas    998552 Mar  5 21:35 agis_schedconf.cvmfs.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 21:35 agis_ddmendpoints.agis.ALL.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas       439 Mar  5 21:35 workernode_map.json
2026-03-05 17:51:29 (14644): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 21:35 pilot3
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas 188950367 Mar  5 23:50 HITS.48929183._000121.pool.root.1
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas      1033 Mar  5 23:50 memory_monitor_summary.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas    380846 Mar  5 23:50 log.48929183._000121.job.log.tgz.1
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas      6386 Mar  5 23:50 heartbeat.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 23:51 pilot_heartbeat.json
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  5 23:51 pilotlog.txt
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas   1106557 Mar  5 23:51 log.48929183._000121.job.log.1
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 23:51 output.list
2026-03-05 17:51:29 (14644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 23:51 runtime_log
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas   1505280 Mar  5 23:51 result.tar.gz
2026-03-05 17:51:29 (14644): Guest Log: -rw-r--r--. 1 atlas atlas      8754 Mar  5 23:51 runtime_log.err
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas       655 Mar  5 23:51 5ZlKDmRrRI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUTMLDmSAV6mn.diag
2026-03-05 17:51:29 (14644): Guest Log: Looking for outputfile HITS.48929183._000121.pool.root.1
2026-03-05 17:51:29 (14644): Guest Log: HITS file was successfully produced
2026-03-05 17:51:29 (14644): Guest Log: -rw-------. 1 atlas atlas 188950367 Mar  5 23:50 /home/atlas/RunAtlas/HITS.48929183._000121.pool.root.1
2026-03-05 17:51:30 (14644): Guest Log: Successfully finished the ATLAS job!
2026-03-05 17:51:30 (14644): Guest Log: Copying the results back to the shared directory!
2026-03-05 17:51:30 (14644): Guest Log:  *** Contents of shared directory: ***
2026-03-05 17:51:30 (14644): Guest Log: total 455676
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root 275523537 Mar  5 21:33 ATLAS.root_0
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root 188950367 Mar  5 23:51 HITS.pool.root.1
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root      8525 Mar  5 21:33 init_data.xml
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root    597954 Mar  5 21:33 input.tar.gz
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root   1505280 Mar  5 23:51 result.tar.gz
2026-03-05 17:51:30 (14644): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 21:33 start_atlas.sh
2026-03-05 17:51:30 (14644): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 17:51:30 (14644): VM Completion File Detected.
2026-03-05 17:51:30 (14644): Powering off VM.
2026-03-05 17:51:30 (14644): Successfully stopped VM.
2026-03-05 17:51:30 (14644): Deregistering VM. (boinc_3f5112db5e6695ca, slot#3)
2026-03-05 17:51:30 (14644): Removing network bandwidth throttle group from VM.
2026-03-05 17:51:30 (14644): Removing VM from VirtualBox.
2026-03-05 17:51:35 (14644): called boinc_finish(0)

</stderr_txt>
]]>

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