Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:35 (880574): wrapper (7.7.26015): starting
16:08:35 (880574): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 16:08:35] Arguments: --nthreads 12
[2026-03-05 16:08:35] Threads: 12
[2026-03-05 16:08:35] Checking for CVMFS
[2026-03-05 16:08:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 16:08:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 16:08:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 16:08:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 16:08:37] 2.11.5.0 3953955 171547 274620 156937 3 705 38021586 45568001 26179 130560 0 1501382062 99.807 877356362 23999 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3126 0
[2026-03-05 16:08:37] CVMFS is ok
[2026-03-05 16:08:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 16:08:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 16:08:37] Further information can be found at the LHC@home message board.
[2026-03-05 16:08:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 16:08:37] Checking for apptainer binary...
[2026-03-05 16:08:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 16:08:37] Running /usr/bin/apptainer --version
[2026-03-05 16:08:37] apptainer version 1.4.1-1.el9
[2026-03-05 16:08:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 16:08:38] wns0046.triumf.lcg
[2026-03-05 16:08:38] apptainer works
[2026-03-05 16:08:38] Set ATHENA_PROC_NUMBER=12
[2026-03-05 16:08:38] Set ATHENA_CORE_NUMBER=12
[2026-03-05 16:08:38] Starting ATLAS job with PandaID=7042300698
[2026-03-05 16:08:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 16:13:20]  *** The last 200 lines of the pilot log: ***
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | will not add max space = 0 B to job metrics
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | wrong length of table data, x=[1772755786.0], y=[1644.0] (must be same and length>=4)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . Timing measurements:
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . get job = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . initial setup = 16 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . payload setup = 17 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-in = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . payload execution = 39 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-out = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . log creation = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7042300698/pilotlog.txt
[2026-03-05 16:13:20] 2026-03-06 00:12:14,291 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 16:13:20] - Log from pilotlog.txt -
[2026-03-05 16:13:20] 2026-03-06 00:12:14,267 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 16:13:20] 2026-03-06 00:12:14,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | found no stored workdir sizes
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | will not add max space = 0 B to job metrics
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | wrong length of table data, x=[1772755786.0], y=[1644.0] (must be same and length>=4)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . Timing measurements:
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . get job = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . initial setup = 16 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . payload setup = 17 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-in = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . payload execution = 39 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-out = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . log creation = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7042300698/pilotlog.txt
[2026-03-05 16:13:20] 2026-03-06 00:12:14,292 | WARNING  | 
[2026-03-05 16:13:20] [begin log extracts]
[2026-03-05 16:13:20] - Log from pilotlog.txt -
[2026-03-05 16:13:20] 2026-03-06 00:12:14,267 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 16:13:20] 2026-03-06 00:12:14,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | found no stored workdir sizes
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | will not add max space = 0 B to job metrics
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | WARNING  | wrong length of table data, x=[1772755786.0], y=[1644.0] (must be same and length>=4)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . Timing measurements:
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . get job = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . initial setup = 16 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,268 | INFO     | . payload setup = 17 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-in = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . payload execution = 39 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . stage-out = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | . log creation = 0 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | ..............................
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 16:13:20] 2026-03-06 00:12:14,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7042300698/pilotlog.txt
[2026-03-05 16:13:20] [end log extracts]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,292 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,293 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 16:13:20] 2026-03-06 00:12:14,579 | INFO     | 
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | job summary report
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | --------------------------------------------------
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | PanDA job id: 7042300698
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | task id: 48958651
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 16:10:07,763 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | pilot state: failed 
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | transexitcode: 65
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | exeerrorcode: 65
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | exitcode: 65
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | cpuconsumptiontime: 13 s
[2026-03-05 16:13:20] 2026-03-06 00:12:14,580 | INFO     | nevents: 0
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | neventsw: 0
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | pid: 889034
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | pgrp: 889034
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | corecount: 12
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | event service: False
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | sizes: {0: 2295415, 1: 2295848, 2: 2295904, 60: 2319097, 62: 2323389, 63: 2323417, 178: 2323711}
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | --------------------------------------------------
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | 
[2026-03-05 16:13:20] 2026-03-06 00:12:14,581 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 16:13:20] 2026-03-06 00:12:14,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,661 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 16:13:20] 2026-03-06 00:12:14,661 | INFO     | job 7042300698 has completed (purged errors)
[2026-03-05 16:13:20] 2026-03-06 00:12:14,661 | INFO     | overall cleanup function is called
[2026-03-05 16:13:20] 2026-03-06 00:12:14,858 | INFO     | PID=884412 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 16:13:20] 2026-03-06 00:12:14,858 | INFO     | .. there are 42 such processes running
[2026-03-05 16:13:20] 2026-03-06 00:12:15,667 | INFO     | --- collectZombieJob: --- 10, [889034]
[2026-03-05 16:13:20] 2026-03-06 00:12:15,667 | INFO     | zombie collector waiting for pid 889034
[2026-03-05 16:13:20] 2026-03-06 00:12:15,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 16:13:20] 2026-03-06 00:12:15,668 | INFO     | collected zombie processes
[2026-03-05 16:13:20] 2026-03-06 00:12:15,668 | INFO     | will attempt to kill all subprocesses of pid=889034
[2026-03-05 16:13:20] 2026-03-06 00:12:15,919 | INFO     | process IDs to be killed: [889034] (in reverse order)
[2026-03-05 16:13:20] 2026-03-06 00:12:16,392 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 16:13:20] 2026-03-06 00:12:16,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 16:13:20] 2026-03-06 00:12:16,437 | INFO     | did not find any defunct processes belonging to 889034
[2026-03-05 16:13:20] 2026-03-06 00:12:16,491 | INFO     | did not find any defunct processes belonging to 889034
[2026-03-05 16:13:20] 2026-03-06 00:12:16,492 | INFO     | ready for new job
[2026-03-05 16:13:20] 2026-03-06 00:12:16,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 16:13:20] 2026-03-06 00:12:16,493 | INFO     | **************************************
[2026-03-05 16:13:20] 2026-03-06 00:12:16,493 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 16:13:20] 2026-03-06 00:12:16,493 | INFO     | **************************************
[2026-03-05 16:13:20] 2026-03-06 00:12:16,493 | INFO     | 
[2026-03-05 16:13:20] 2026-03-06 00:12:16,514 | INFO     | architecture information:
[2026-03-05 16:13:20] 2026-03-06 00:12:16,515 | INFO     | executing command: cat /etc/os-release
[2026-03-05 16:13:20] 2026-03-06 00:12:16,565 | INFO     | cat /etc/os-release:
[2026-03-05 16:13:20] NAME="CentOS Linux"
[2026-03-05 16:13:20] VERSION="7 (Core)"
[2026-03-05 16:13:20] ID="centos"
[2026-03-05 16:13:20] ID_LIKE="rhel fedora"
[2026-03-05 16:13:20] VERSION_ID="7"
[2026-03-05 16:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 16:13:20] ANSI_COLOR="0;31"
[2026-03-05 16:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 16:13:20] HOME_URL="https://www.centos.org/"
[2026-03-05 16:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 16:13:20] 
[2026-03-05 16:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 16:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 16:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 16:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 16:13:20] 
[2026-03-05 16:13:20] 2026-03-06 00:12:16,565 | INFO     | **************************************
[2026-03-05 16:13:20] 2026-03-06 00:12:17,079 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 16:13:20] 2026-03-06 00:12:17,105 | INFO     | sufficient remaining disk space (2162945949696 B)
[2026-03-05 16:13:20] 2026-03-06 00:12:17,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 16:13:20] 2026-03-06 00:12:17,105 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 16:13:20] 2026-03-06 00:12:17,105 | INFO     | update_server=False
[2026-03-05 16:13:20] 2026-03-06 00:12:17,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 16:13:20] 2026-03-06 00:12:17,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:13:20] 2026-03-06 00:12:17,178 | INFO     | aborting loop
[2026-03-05 16:13:20] 2026-03-06 00:12:17,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 16:13:20] 2026-03-06 00:12:18,028 | INFO     | all data control threads have been joined
[2026-03-05 16:13:20] 2026-03-06 00:12:18,111 | INFO     | [job] retrieve thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,183 | INFO     | [job] job monitor thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,248 | INFO     | all payload control threads have been joined
[2026-03-05 16:13:20] 2026-03-06 00:12:18,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 16:13:20] 2026-03-06 00:12:18,629 | INFO     | all job control threads have been joined
[2026-03-05 16:13:20] 2026-03-06 00:12:18,902 | INFO     | [data] copytool_in thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,909 | INFO     | [job] validate thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,978 | INFO     | [payload] validate_post thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:18,999 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,034 | INFO     | [data] control thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,152 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,223 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,254 | INFO     | [payload] control thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:13:20] 2026-03-06 00:12:19,429 | INFO     | [payload] failed_post thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:19,635 | INFO     | [job] control thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:20,381 | INFO     | [job] queue monitor thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:20,512 | INFO     | [data] copytool_out thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:21,735 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 16:13:20] 2026-03-06 00:12:47,405 | INFO     | PID=884412 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 16:13:20] 2026-03-06 00:12:47,405 | INFO     | .. there are 42 such processes running
[2026-03-05 16:13:20] 2026-03-06 00:12:47,405 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 16:13:20] 2026-03-06 00:12:47,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 16:13:20] 2026-03-06 00:12:47,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 16:13:20] 2026-03-06 00:13:13,230 | INFO     | [monitor] cgroup control has ended
[2026-03-05 16:13:20] 2026-03-06 00:13:14,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630012610368)>', '<ExcThread(monitor, started 139629244180224)>']
[2026-03-05 16:13:20] 2026-03-06 00:13:14,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 16:13:20] 2026-03-06 00:13:14,605 | INFO     | [monitor] control thread has ended
[2026-03-05 16:13:20] 2026-03-06 00:13:19,345 | INFO     | all workflow threads have been joined
[2026-03-05 16:13:20] 2026-03-06 00:13:19,345 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 16:13:20] 2026-03-06 00:13:19,346 | INFO     | traces error code: 0
[2026-03-05 16:13:20] 2026-03-06 00:13:19,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 16:13:20] 2026-03-06 00:13:19,890 [wrapper] ==== pilot stdout END ====
[2026-03-05 16:13:20] 2026-03-06 00:13:19,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 16:13:20] 2026-03-06 00:13:19,910 [wrapper] pilotpid: 884412
[2026-03-05 16:13:20] 2026-03-06 00:13:19,916 [wrapper] Pilot exit status: 0
[2026-03-05 16:13:20] 2026-03-06 00:13:20,036 [wrapper] pandaids: 7042300698
[2026-03-05 16:13:20] 2026-03-06 00:13:20,338 [wrapper] cleanup supervisor_pilot  884418 884413
[2026-03-05 16:13:20] 2026-03-06 00:13:20,438 [wrapper] Test setup, not cleaning
[2026-03-05 16:13:20] 2026-03-06 00:13:20,460 [wrapper] apfmon messages muted
[2026-03-05 16:13:20] 2026-03-06 00:13:20,483 [wrapper] ==== wrapper stdout END ====
[2026-03-05 16:13:20] 2026-03-06 00:13:20,492 [wrapper] ==== wrapper stderr END ====
[2026-03-05 16:13:20]  *** Error codes and diagnostics ***
[2026-03-05 16:13:20]     "exeErrorCode": 65,
[2026-03-05 16:13:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 16:13:20]     "pilotErrorCode": 1305,
[2026-03-05 16:13:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 16:13:20]  *** Listing of results directory ***
[2026-03-05 16:13:20] total 257024
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc    584627 Mar  5 13:14 pilot3.tar.gz
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc      5111 Mar  5 13:15 queuedata.json
[2026-03-05 16:13:20] -rwx------. 1 boinc boinc     36322 Mar  5 13:15 runpilot2-wrapper.sh
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc       100 Mar  5 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 16:13:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 16:08 run_atlas
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc       105 Mar  5 16:08 job.xml
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc      6594 Mar  5 16:08 init_data.xml
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc 259053146 Mar  5 16:08 EVNT.48958649._000036.pool.root.1
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc     15845 Mar  5 16:08 start_atlas.sh
[2026-03-05 16:13:20] drwxrwx--x. 2 boinc boinc      4096 Mar  5 16:08 shared
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc    597980 Mar  5 16:08 input.tar.gz
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc         0 Mar  5 16:08 boinc_lockfile
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc      2618 Mar  5 16:08 pandaJob.out
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc    998552 Mar  5 16:08 agis_schedconf.cvmfs.json
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc   1521291 Mar  5 16:08 agis_ddmendpoints.agis.ALL.json
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc       445 Mar  5 16:09 workernode_map.json
[2026-03-05 16:13:20] drwx------. 5 boinc boinc      4096 Mar  5 16:09 pilot3
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc       523 Mar  5 16:10 boinc_task_state.xml
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc       956 Mar  5 16:10 memory_monitor_summary.json
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc     20999 Mar  5 16:10 log.48958651._000915.job.log.tgz.1
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc        95 Mar  5 16:12 pilot_heartbeat.json
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc      7023 Mar  5 16:12 heartbeat.json
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc      4818 Mar  5 16:13 pilotlog.txt
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc      8192 Mar  5 16:13 boinc_mmap_file
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc        22 Mar  5 16:13 wrapper_checkpoint.txt
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc     83051 Mar  5 16:13 log.48958651._000915.job.log.1
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc       188 Mar  5 16:13 output.list
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc       620 Mar  5 16:13 runtime_log
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc    122880 Mar  5 16:13 result.tar.gz
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc      8635 Mar  5 16:13 runtime_log.err
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc       643 Mar  5 16:13 IzxNDmiDVI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmC3OLDmeuJSMn.diag
[2026-03-05 16:13:20] -rw-r--r--. 1 boinc boinc     21762 Mar  5 16:13 stderr.txt
[2026-03-05 16:13:20] No HITS result produced
[2026-03-05 16:13:20]  *** Contents of shared directory: ***
[2026-03-05 16:13:20] total 253704
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc 259053146 Mar  5 16:08 ATLAS.root_0
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc     15845 Mar  5 16:08 start_atlas.sh
[2026-03-05 16:13:20] -rw-r--r--. 2 boinc boinc    597980 Mar  5 16:08 input.tar.gz
[2026-03-05 16:13:20] -rw-------. 1 boinc boinc    122880 Mar  5 16:13 result.tar.gz
16:13:22 (880574): run_atlas exited; CPU time 19.687508
16:13:22 (880574): called boinc_finish(0)

</stderr_txt>
]]>

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