Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:49:47 (18410): wrapper (7.7.26015): starting
08:49:47 (18410): wrapper: running run_atlas (--nthreads 8)
[2026-03-06 08:49:47] Arguments: --nthreads 8
[2026-03-06 08:49:47] Threads: 8
[2026-03-06 08:49:47] Checking for CVMFS
[2026-03-06 08:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 08:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 08:49:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 08:49:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 08:49:57] 2.13.3.0 18623 0 25556 156933 3 1 4077136 4096000 0 130560 0 0 100.000 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-03-06 08:49:57] CVMFS is ok
[2026-03-06 08:49:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 08:49:57] Checking for apptainer binary...
[2026-03-06 08:49:57] apptainer is not installed, using version from CVMFS
[2026-03-06 08:49:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 08:49:58] gp
[2026-03-06 08:49:58] apptainer works
[2026-03-06 08:49:58] Set ATHENA_PROC_NUMBER=8
[2026-03-06 08:49:58] Set ATHENA_CORE_NUMBER=8
[2026-03-06 08:49:58] Starting ATLAS job with PandaID=7040349129
[2026-03-06 08:49:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 11:35:01]  *** The last 200 lines of the pilot log: ***
[2026-03-06 11:35:01] 2026-03-06 00:34:23,604 | INFO     | time since job start (9824s) is within the limit (349056.0s)
[2026-03-06 11:35:01] 2026-03-06 00:34:23,677 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 11:35:01] 2026-03-06 00:34:24,738 | INFO     | job 7040349129 has state=finished
[2026-03-06 11:35:01] 2026-03-06 00:34:24,738 | INFO     | preparing for final server update for job 7040349129 in state='finished'
[2026-03-06 11:35:01] 2026-03-06 00:34:24,738 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7040349129/jobReport.json
[2026-03-06 11:35:01] 2026-03-06 00:34:24,742 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-06 11:35:01] 2026-03-06 00:34:24,743 | INFO     | this job has now completed (state=finished)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,743 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,743 | INFO     | log transfer has been attempted: DONE
[2026-03-06 11:35:01] 2026-03-06 00:34:24,744 | INFO     | job 7040349129 has finished - writing final server update
[2026-03-06 11:35:01] 2026-03-06 00:34:24,744 | INFO     | total number of processed events: 400 (read)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,748 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7040349129/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,749 | INFO     | extracted standard info from prmon json
[2026-03-06 11:35:01] 2026-03-06 00:34:24,749 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 11:35:01] 2026-03-06 00:34:24,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 11:35:01] 2026-03-06 00:34:24,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 11:35:01] 2026-03-06 00:34:24,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 11:35:01] 2026-03-06 00:34:24,754 | INFO     | fitting pss+swap vs Time
[2026-03-06 11:35:01] 2026-03-06 00:34:24,755 | INFO     | sum of square deviations: 1294014960.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,756 | INFO     | sum of deviations: 18664966172.000008
[2026-03-06 11:35:01] 2026-03-06 00:34:24,757 | INFO     | mean x: 1772752334.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,757 | INFO     | mean y: 2533828.385093168
[2026-03-06 11:35:01] 2026-03-06 00:34:24,757 | INFO     | intersect: -25567775146.59311
[2026-03-06 11:35:01] 2026-03-06 00:34:24,757 | INFO     | chi2: 2.505279819387177
[2026-03-06 11:35:01] 2026-03-06 00:34:24,758 | INFO     | sum of square deviations: 1177156955.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,759 | INFO     | sum of deviations: 18202258327.499992
[2026-03-06 11:35:01] 2026-03-06 00:34:24,760 | INFO     | mean x: 1772752181.5
[2026-03-06 11:35:01] 2026-03-06 00:34:24,760 | INFO     | mean y: 2533224.378205128
[2026-03-06 11:35:01] 2026-03-06 00:34:24,760 | INFO     | intersect: -27409353543.348663
[2026-03-06 11:35:01] 2026-03-06 00:34:24,760 | INFO     | chi2: 2.5090643577116065
[2026-03-06 11:35:01] 2026-03-06 00:34:24,760 | INFO     | current chi2=2.5090643577116065 (change=-0.15106249989093964 %)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,761 | INFO     | right removable region: 155
[2026-03-06 11:35:01] 2026-03-06 00:34:24,761 | INFO     | sum of square deviations: 1177156955.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,762 | INFO     | sum of deviations: -18924874057.000008
[2026-03-06 11:35:01] 2026-03-06 00:34:24,763 | INFO     | mean x: 1772752486.5
[2026-03-06 11:35:01] 2026-03-06 00:34:24,763 | INFO     | mean y: 2582675.8846153845
[2026-03-06 11:35:01] 2026-03-06 00:34:24,763 | INFO     | intersect: 28502705279.540394
[2026-03-06 11:35:01] 2026-03-06 00:34:24,763 | INFO     | chi2: 0.2785560954105653
[2026-03-06 11:35:01] 2026-03-06 00:34:24,764 | INFO     | current chi2=0.2785560954105653 (change=88.8812382052116 %)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,764 | INFO     | sum of square deviations: 1067554900.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,765 | INFO     | sum of deviations: -18535423522.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,765 | INFO     | mean x: 1772752639.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,766 | INFO     | mean y: 2581962.19205298
[2026-03-06 11:35:01] 2026-03-06 00:34:24,766 | INFO     | intersect: 30782002265.174297
[2026-03-06 11:35:01] 2026-03-06 00:34:24,766 | INFO     | chi2: 0.21067283366827613
[2026-03-06 11:35:01] 2026-03-06 00:34:24,766 | INFO     | current chi2=0.21067283366827613 (change=24.36969172842392 %)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,767 | INFO     | left removable region: 20
[2026-03-06 11:35:01] 2026-03-06 00:34:24,767 | INFO     | sum of square deviations: 762879420.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,768 | INFO     | sum of deviations: -2376361871.9999995
[2026-03-06 11:35:01] 2026-03-06 00:34:24,768 | INFO     | mean x: 1772752761.0
[2026-03-06 11:35:01] 2026-03-06 00:34:24,768 | INFO     | mean y: 2557426.3851851854
[2026-03-06 11:35:01] 2026-03-06 00:34:24,769 | INFO     | intersect: 5524664799.163871
[2026-03-06 11:35:01] 2026-03-06 00:34:24,769 | INFO     | chi2: 0.07275696636013394
[2026-03-06 11:35:01] 2026-03-06 00:34:24,769 | INFO     | current memory leak: -3.11 B/s (using 135 data points, chi2=0.07)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,770 | INFO     | could have reported an average CPU frequency of 1882 MHz (9 samples)
[2026-03-06 11:35:01] 2026-03-06 00:34:24,770 | INFO     | ..............................
[2026-03-06 11:35:01] 2026-03-06 00:34:24,770 | INFO     | . Timing measurements:
[2026-03-06 11:35:01] 2026-03-06 00:34:24,770 | INFO     | . get job = 0 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . initial setup = 15 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . payload setup = 8 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . stage-in = 0 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . payload execution = 9808 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . stage-out = 0 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | . log creation = 0 s
[2026-03-06 11:35:01] 2026-03-06 00:34:24,771 | INFO     | ..............................
[2026-03-06 11:35:01] 2026-03-06 00:34:25,176 | INFO     | 
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | job summary report
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | --------------------------------------------------
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | PanDA job id: 7040349129
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | task id: 48973281
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | errors: (none)
[2026-03-06 11:35:01] 2026-03-06 00:34:25,177 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | pilot state: finished 
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | transexitcode: 0
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | exeerrorcode: 0
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | exeerrordiag: 
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | exitcode: 0
[2026-03-06 11:35:01] 2026-03-06 00:34:25,178 | INFO     | exitmsg: OK
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | cpuconsumptiontime: 73773 s
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | nevents: 400
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | neventsw: 0
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | pid: 27107
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | pgrp: 27107
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | corecount: 8
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | event service: False
[2026-03-06 11:35:01] 2026-03-06 00:34:25,179 | INFO     | sizes: {0: 2295416, 1: 2295877, 9820: 2324323, 9821: 2333335, 9823: 2333391, 9824: 2333649}
[2026-03-06 11:35:01] 2026-03-06 00:34:25,180 | INFO     | --------------------------------------------------
[2026-03-06 11:35:01] 2026-03-06 00:34:25,180 | INFO     | 
[2026-03-06 11:35:01] 2026-03-06 00:34:25,180 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-06 11:35:01] 2026-03-06 00:34:25,227 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,228 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,228 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,228 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 11:35:01] 2026-03-06 00:34:25,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,231 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 11:35:01] 2026-03-06 00:34:25,231 | INFO     | job 7040349129 has completed (purged errors)
[2026-03-06 11:35:01] 2026-03-06 00:34:25,231 | INFO     | overall cleanup function is called
[2026-03-06 11:35:01] 2026-03-06 00:34:26,242 | INFO     | --- collectZombieJob: --- 10, [27107]
[2026-03-06 11:35:01] 2026-03-06 00:34:26,243 | INFO     | zombie collector waiting for pid 27107
[2026-03-06 11:35:01] 2026-03-06 00:34:26,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 11:35:01] 2026-03-06 00:34:26,243 | INFO     | collected zombie processes
[2026-03-06 11:35:01] 2026-03-06 00:34:26,243 | INFO     | will attempt to kill all subprocesses of pid=27107
[2026-03-06 11:35:01] 2026-03-06 00:34:26,355 | INFO     | process IDs to be killed: [27107] (in reverse order)
[2026-03-06 11:35:01] 2026-03-06 00:34:26,434 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 11:35:01] 2026-03-06 00:34:26,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 11:35:01] 2026-03-06 00:34:26,438 | INFO     | did not find any defunct processes belonging to 27107
[2026-03-06 11:35:01] 2026-03-06 00:34:26,442 | INFO     | did not find any defunct processes belonging to 27107
[2026-03-06 11:35:01] 2026-03-06 00:34:26,442 | INFO     | ready for new job
[2026-03-06 11:35:01] 2026-03-06 00:34:26,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 11:35:01] 2026-03-06 00:34:26,444 | INFO     | **************************************
[2026-03-06 11:35:01] 2026-03-06 00:34:26,445 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 11:35:01] 2026-03-06 00:34:26,445 | INFO     | **************************************
[2026-03-06 11:35:01] 2026-03-06 00:34:26,445 | INFO     | 
[2026-03-06 11:35:01] 2026-03-06 00:34:26,446 | INFO     | architecture information:
[2026-03-06 11:35:01] 2026-03-06 00:34:26,447 | INFO     | executing command: cat /etc/os-release
[2026-03-06 11:35:01] 2026-03-06 00:34:26,473 | INFO     | cat /etc/os-release:
[2026-03-06 11:35:01] NAME="CentOS Linux"
[2026-03-06 11:35:01] VERSION="7 (Core)"
[2026-03-06 11:35:01] ID="centos"
[2026-03-06 11:35:01] ID_LIKE="rhel fedora"
[2026-03-06 11:35:01] VERSION_ID="7"
[2026-03-06 11:35:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 11:35:01] ANSI_COLOR="0;31"
[2026-03-06 11:35:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 11:35:01] HOME_URL="https://www.centos.org/"
[2026-03-06 11:35:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 11:35:01] 
[2026-03-06 11:35:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 11:35:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 11:35:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 11:35:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 11:35:01] 
[2026-03-06 11:35:01] 2026-03-06 00:34:26,474 | INFO     | **************************************
[2026-03-06 11:35:01] 2026-03-06 00:34:26,974 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-06 11:35:01] 2026-03-06 00:34:27,008 | INFO     | sufficient remaining disk space (17438867456 B)
[2026-03-06 11:35:01] 2026-03-06 00:34:27,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 11:35:01] 2026-03-06 00:34:27,009 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 11:35:01] 2026-03-06 00:34:27,009 | INFO     | update_server=False
[2026-03-06 11:35:01] 2026-03-06 00:34:27,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 11:35:01] 2026-03-06 00:34:27,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:35:01] 2026-03-06 00:34:27,010 | INFO     | aborting loop
[2026-03-06 11:35:01] 2026-03-06 00:34:27,178 | INFO     | all data control threads have been joined
[2026-03-06 11:35:01] 2026-03-06 00:34:27,200 | INFO     | all payload control threads have been joined
[2026-03-06 11:35:01] 2026-03-06 00:34:27,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 11:35:01] 2026-03-06 00:34:28,015 | INFO     | [job] retrieve thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,016 | INFO     | [job] job monitor thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,096 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,184 | INFO     | [data] control thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,206 | INFO     | [payload] control thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,314 | INFO     | [payload] validate_post thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,368 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,547 | INFO     | [payload] failed_post thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:28,700 | INFO     | all job control threads have been joined
[2026-03-06 11:35:01] 2026-03-06 00:34:28,798 | INFO     | [data] copytool_in thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:29,184 | INFO     | [job] validate thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:29,236 | INFO     | [data] copytool_out thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:29,305 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:29,706 | INFO     | [job] control thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:29,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 11:35:01] 2026-03-06 00:34:29,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 11:35:01] 2026-03-06 00:34:30,875 | INFO     | [job] queue monitor thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:33,801 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:37,819 | INFO     | job.realtimelogging is not enabled
[2026-03-06 11:35:01] 2026-03-06 00:34:38,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 11:35:01] 2026-03-06 00:34:55,233 | INFO     | [monitor] cgroup control has ended
[2026-03-06 11:35:01] 2026-03-06 00:34:55,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128746350180160)>', '<ExcThread(monitor, started 128745671227136)>']
[2026-03-06 11:35:01] 2026-03-06 00:34:56,820 | INFO     | PID=22700 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-06 11:35:01] 2026-03-06 00:34:56,821 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 11:35:01] 2026-03-06 00:34:56,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 11:35:01] 2026-03-06 00:34:56,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 11:35:01] 2026-03-06 00:34:56,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 11:35:01] 2026-03-06 00:34:56,822 | INFO     | [monitor] control thread has ended
[2026-03-06 11:35:01] 2026-03-06 00:35:00,776 | INFO     | all workflow threads have been joined
[2026-03-06 11:35:01] 2026-03-06 00:35:00,776 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 11:35:01] 2026-03-06 00:35:00,777 | INFO     | traces error code: 0
[2026-03-06 11:35:01] 2026-03-06 00:35:00,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 11:35:01] 2026-03-06 00:35:00,911 [wrapper] ==== pilot stdout END ====
[2026-03-06 11:35:01] 2026-03-06 00:35:00,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 11:35:01] 2026-03-06 00:35:00,921 [wrapper] pilotpid: 22700
[2026-03-06 11:35:01] 2026-03-06 00:35:00,926 [wrapper] Pilot exit status: 0
[2026-03-06 11:35:01] 2026-03-06 00:35:00,943 [wrapper] pandaids: 7040349129
[2026-03-06 11:35:01] 2026-03-06 00:35:00,985 [wrapper] cleanup supervisor_pilot   32437 22701
[2026-03-06 11:35:01] 2026-03-06 00:35:00,990 [wrapper] Test setup, not cleaning
[2026-03-06 11:35:01] 2026-03-06 00:35:00,994 [wrapper] apfmon messages muted
[2026-03-06 11:35:01] 2026-03-06 00:35:00,999 [wrapper] ==== wrapper stdout END ====
[2026-03-06 11:35:01] 2026-03-06 00:35:01,004 [wrapper] ==== wrapper stderr END ====
[2026-03-06 11:35:01]  *** Error codes and diagnostics ***
[2026-03-06 11:35:01]     "exeErrorCode": 0,
[2026-03-06 11:35:01]     "exeErrorDiag": "",
[2026-03-06 11:35:01]     "pilotErrorCode": 0,
[2026-03-06 11:35:01]     "pilotErrorDiag": "",
[2026-03-06 11:35:01]  *** Listing of results directory ***
[2026-03-06 11:35:01] total 506384
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc    584627 Mar  5 03:22 pilot3.tar.gz
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc      5111 Mar  5 03:49 queuedata.json
[2026-03-06 11:35:01] -rwx------ 1 boinc boinc     36322 Mar  5 03:49 runpilot2-wrapper.sh
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc       100 Mar  6 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 11:35:01] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 08:49 run_atlas
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc       105 Mar  6 08:49 job.xml
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc 296979268 Mar  6 08:49 EVNT.48716896._000010.pool.root.1
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc    597954 Mar  6 08:49 input.tar.gz
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc     15845 Mar  6 08:49 start_atlas.sh
[2026-03-06 11:35:01] drwxrwx--x 2 boinc boinc      4096 Mar  6 08:49 shared
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc         0 Mar  6 08:49 boinc_setup_complete
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc      9207 Mar  6 08:49 init_data.xml
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc         0 Mar  6 08:49 boinc_lockfile
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc      2594 Mar  6 08:49 pandaJob.out
[2026-03-06 11:35:01] -rw------- 1 boinc boinc    998552 Mar  6 08:50 agis_schedconf.cvmfs.json
[2026-03-06 11:35:01] -rw------- 1 boinc boinc   1521291 Mar  6 08:50 agis_ddmendpoints.agis.ALL.json
[2026-03-06 11:35:01] -rw------- 1 boinc boinc       424 Mar  6 08:50 workernode_map.json
[2026-03-06 11:35:01] drwx------ 5 boinc boinc      4096 Mar  6 08:50 pilot3
[2026-03-06 11:35:01] -rw------- 1 boinc boinc 214105306 Mar  6 11:33 HITS.48973281._000230.pool.root.1
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc       529 Mar  6 11:33 boinc_task_state.xml
[2026-03-06 11:35:01] -rw------- 1 boinc boinc      1032 Mar  6 11:34 memory_monitor_summary.json
[2026-03-06 11:35:01] -rw------- 1 boinc boinc    392278 Mar  6 11:34 log.48973281._000230.job.log.tgz.1
[2026-03-06 11:35:01] -rw------- 1 boinc boinc      6312 Mar  6 11:34 heartbeat.json
[2026-03-06 11:35:01] -rw------- 1 boinc boinc        95 Mar  6 11:34 pilot_heartbeat.json
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc      8192 Mar  6 11:35 boinc_mmap_file
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc        27 Mar  6 11:35 wrapper_checkpoint.txt
[2026-03-06 11:35:01] -rw------- 1 boinc boinc      4821 Mar  6 11:35 pilotlog.txt
[2026-03-06 11:35:01] -rw------- 1 boinc boinc   1364908 Mar  6 11:35 log.48973281._000230.job.log.1
[2026-03-06 11:35:01] -rw------- 1 boinc boinc       357 Mar  6 11:35 output.list
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc       620 Mar  6 11:35 runtime_log
[2026-03-06 11:35:01] -rw------- 1 boinc boinc   1771520 Mar  6 11:35 result.tar.gz
[2026-03-06 11:35:01] -rw------- 1 boinc boinc       641 Mar  6 11:35 t75LDmEb4H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVxILDmR8Qh6m.diag
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc      8863 Mar  6 11:35 runtime_log.err
[2026-03-06 11:35:01] -rw-r--r-- 1 boinc boinc     20964 Mar  6 11:35 stderr.txt
[2026-03-06 11:35:01] HITS file was successfully produced:
[2026-03-06 11:35:01] -rw------- 1 boinc boinc 214105306 Mar  6 11:33 shared/HITS.pool.root.1
[2026-03-06 11:35:01]  *** Contents of shared directory: ***
[2026-03-06 11:35:01] total 501448
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc 296979268 Mar  6 08:49 ATLAS.root_0
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc    597954 Mar  6 08:49 input.tar.gz
[2026-03-06 11:35:01] -rw-r--r-- 2 boinc boinc     15845 Mar  6 08:49 start_atlas.sh
[2026-03-06 11:35:01] -rw------- 1 boinc boinc 214105306 Mar  6 11:33 HITS.pool.root.1
[2026-03-06 11:35:01] -rw------- 1 boinc boinc   1771520 Mar  6 11:35 result.tar.gz
11:35:02 (18410): run_atlas exited; CPU time 73946.765119
11:35:02 (18410): called boinc_finish(0)

</stderr_txt>
]]>

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