Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:09:48 (220340): wrapper (7.7.26015): starting
16:09:48 (220340): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 16:09:48] Arguments: --nthreads 4
[2026-03-05 16:09:48] Threads: 4
[2026-03-05 16:09:48] Checking for CVMFS
[2026-03-05 16:09:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 16:09:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 16:09:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 16:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 16:09:48] 2.13.3.0 7121 414 49104 156932 2 188 3135370 4096000 2739 130560 0 575814 99.995 15269 310 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-05 16:09:48] CVMFS is ok
[2026-03-05 16:09:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 16:09:48] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-05 16:09:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-05 16:09:48] Further information can be found at the LHC@home message board.
[2026-03-05 16:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 16:09:48] Checking for apptainer binary...
[2026-03-05 16:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 16:09:48] Running /usr/bin/apptainer --version
[2026-03-05 16:09:48] apptainer version 1.4.5
[2026-03-05 16:09:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 16:09:48] Taichi-Ubuntu
[2026-03-05 16:09:48] apptainer works
[2026-03-05 16:09:48] Set ATHENA_PROC_NUMBER=4
[2026-03-05 16:09:48] Set ATHENA_CORE_NUMBER=4
[2026-03-05 16:09:48] Starting ATLAS job with PandaID=7038577150
[2026-03-05 16:09:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 17:32:24]  *** The last 200 lines of the pilot log: ***
[2026-03-05 17:32:24]  filetype=log
[2026-03-05 17:32:24]  guid=ea9fb773-f6f6-44c3-9d45-6482ee781b91
[2026-03-05 17:32:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 17:32:24]  is_altstaged=None
[2026-03-05 17:32:24]  is_tar=False
[2026-03-05 17:32:24]  lfn=log.48700858._002941.job.log.tgz.1
[2026-03-05 17:32:24]  mtime=0
[2026-03-05 17:32:24]  protocol_id=None
[2026-03-05 17:32:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 17:32:24]  replicas=None
[2026-03-05 17:32:24]  scope=mc23_13p6TeV
[2026-03-05 17:32:24]  status=None
[2026-03-05 17:32:24]  status_code=0
[2026-03-05 17:32:24]  storage_token=
[2026-03-05 17:32:24]  surl=/home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7038577150/log.48700858._002941.job.log.tgz.1
[2026-03-05 17:32:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/fa/log.48700858._002941.job.log.tgz.1
[2026-03-05 17:32:24]  workdir=None
[2026-03-05 17:32:24] ]
[2026-03-05 17:32:24] 2026-03-05 22:31:47,378 | INFO     | transferring file log.48700858._002941.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7038577150/log.48700858._002941.job.log.tgz.1 to /home/
[2026-03-05 17:32:24] 2026-03-05 22:31:47,378 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7038577150/log.48700858._002941.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slo
[2026-03-05 17:32:24] 2026-03-05 22:31:47,401 | INFO     | adding to output.list: log.48700858._002941.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/fa/log.48700858._002941.job.log.tg
[2026-03-05 17:32:24] 2026-03-05 22:31:47,401 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 17:32:24] 2026-03-05 22:31:47,401 | INFO     | summary of transferred files:
[2026-03-05 17:32:24] 2026-03-05 22:31:47,401 | INFO     |  -- lfn=log.48700858._002941.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 17:32:24] 2026-03-05 22:31:47,402 | INFO     | stage-out finished correctly
[2026-03-05 17:32:24] 2026-03-05 22:31:48,728 | INFO     | time since job start (4905s) is within the limit (349056.0s)
[2026-03-05 17:32:24] 2026-03-05 22:31:48,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 17:32:24] 2026-03-05 22:31:49,496 | INFO     | monitor loop #369: job 0:7038577150 is in state 'finished'
[2026-03-05 17:32:24] 2026-03-05 22:31:49,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 17:32:24] 2026-03-05 22:31:50,733 | INFO     | time since job start (4907s) is within the limit (349056.0s)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,670 | INFO     | job 7038577150 has state=finished
[2026-03-05 17:32:24] 2026-03-05 22:31:51,670 | INFO     | preparing for final server update for job 7038577150 in state='finished'
[2026-03-05 17:32:24] 2026-03-05 22:31:51,671 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7038577150/jobReport.json
[2026-03-05 17:32:24] 2026-03-05 22:31:51,672 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/12/workernode_map.json
[2026-03-05 17:32:24] 2026-03-05 22:31:51,673 | INFO     | this job has now completed (state=finished)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,673 | INFO     | log transfer has been attempted: DONE
[2026-03-05 17:32:24] 2026-03-05 22:31:51,673 | INFO     | job 7038577150 has finished - writing final server update
[2026-03-05 17:32:24] 2026-03-05 22:31:51,673 | INFO     | total number of processed events: 400 (read)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,678 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7038577150/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,679 | INFO     | extracted standard info from prmon json
[2026-03-05 17:32:24] 2026-03-05 22:31:51,679 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 17:32:24] 2026-03-05 22:31:51,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 17:32:24] 2026-03-05 22:31:51,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 17:32:24] 2026-03-05 22:31:51,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 17:32:24] 2026-03-05 22:31:51,680 | INFO     | fitting pss+swap vs Time
[2026-03-05 17:32:24] 2026-03-05 22:31:51,680 | INFO     | sum of square deviations: 120605052.0
[2026-03-05 17:32:24] 2026-03-05 22:31:51,680 | INFO     | sum of deviations: -492656435.0000002
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | mean x: 1772747525.0
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | mean y: 2310669.9589041094
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | intersect: 7243760852.506594
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | chi2: 0.01282768132752458
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | current memory leak: -4.08 B/s (using 73 data points, chi2=0.01)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | could have reported an average CPU frequency of 3360 MHz (6 samples)
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | ..............................
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . Timing measurements:
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . get job = 0 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . initial setup = 6 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . payload setup = 5 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . stage-in = 0 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . payload execution = 4882 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,681 | INFO     | . stage-out = 0 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,682 | INFO     | . log creation = 0 s
[2026-03-05 17:32:24] 2026-03-05 22:31:51,682 | INFO     | ..............................
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | 
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | job summary report
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | --------------------------------------------------
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | PanDA job id: 7038577150
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | task id: 48700858
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | errors: (none)
[2026-03-05 17:32:24] 2026-03-05 22:31:52,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | pilot state: finished 
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | transexitcode: 0
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | exeerrorcode: 0
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | exeerrordiag: 
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | exitcode: 0
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | exitmsg: OK
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | cpuconsumptiontime: 18840 s
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | nevents: 400
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | neventsw: 0
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | pid: 228946
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | pgrp: 228946
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | corecount: 4
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | event service: False
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | sizes: {0: 2295456, 1: 2295746, 11: 2295746, 4892: 2322105, 4893: 2331133, 4895: 2331189, 4898: 2331511}
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | --------------------------------------------------
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | 
[2026-03-05 17:32:24] 2026-03-05 22:31:52,077 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/12
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | job 7038577150 has completed (purged errors)
[2026-03-05 17:32:24] 2026-03-05 22:31:52,098 | INFO     | overall cleanup function is called
[2026-03-05 17:32:24] 2026-03-05 22:31:53,102 | INFO     | --- collectZombieJob: --- 10, [228946]
[2026-03-05 17:32:24] 2026-03-05 22:31:53,103 | INFO     | zombie collector waiting for pid 228946
[2026-03-05 17:32:24] 2026-03-05 22:31:53,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 17:32:24] 2026-03-05 22:31:53,103 | INFO     | collected zombie processes
[2026-03-05 17:32:24] 2026-03-05 22:31:53,103 | INFO     | will attempt to kill all subprocesses of pid=228946
[2026-03-05 17:32:24] 2026-03-05 22:31:53,285 | INFO     | process IDs to be killed: [228946] (in reverse order)
[2026-03-05 17:32:24] 2026-03-05 22:31:53,352 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 17:32:24] 2026-03-05 22:31:53,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 17:32:24] 2026-03-05 22:31:53,358 | INFO     | did not find any defunct processes belonging to 228946
[2026-03-05 17:32:24] 2026-03-05 22:31:53,363 | INFO     | did not find any defunct processes belonging to 228946
[2026-03-05 17:32:24] 2026-03-05 22:31:53,363 | INFO     | ready for new job
[2026-03-05 17:32:24] 2026-03-05 22:31:53,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 17:32:24] 2026-03-05 22:31:53,364 | INFO     | **************************************
[2026-03-05 17:32:24] 2026-03-05 22:31:53,364 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 17:32:24] 2026-03-05 22:31:53,364 | INFO     | **************************************
[2026-03-05 17:32:24] 2026-03-05 22:31:53,364 | INFO     | 
[2026-03-05 17:32:24] 2026-03-05 22:31:53,366 | INFO     | architecture information:
[2026-03-05 17:32:24] 2026-03-05 22:31:53,366 | INFO     | executing command: cat /etc/os-release
[2026-03-05 17:32:24] 2026-03-05 22:31:53,381 | INFO     | cat /etc/os-release:
[2026-03-05 17:32:24] NAME="CentOS Linux"
[2026-03-05 17:32:24] VERSION="7 (Core)"
[2026-03-05 17:32:24] ID="centos"
[2026-03-05 17:32:24] ID_LIKE="rhel fedora"
[2026-03-05 17:32:24] VERSION_ID="7"
[2026-03-05 17:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 17:32:24] ANSI_COLOR="0;31"
[2026-03-05 17:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 17:32:24] HOME_URL="https://www.centos.org/"
[2026-03-05 17:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 17:32:24] 
[2026-03-05 17:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 17:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 17:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 17:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 17:32:24] 
[2026-03-05 17:32:24] 2026-03-05 22:31:53,382 | INFO     | **************************************
[2026-03-05 17:32:24] 2026-03-05 22:31:53,885 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/12
[2026-03-05 17:32:24] 2026-03-05 22:31:53,902 | INFO     | sufficient remaining disk space (394116726784 B)
[2026-03-05 17:32:24] 2026-03-05 22:31:53,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 17:32:24] 2026-03-05 22:31:53,902 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 17:32:24] 2026-03-05 22:31:53,902 | INFO     | update_server=False
[2026-03-05 17:32:24] 2026-03-05 22:31:53,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 17:32:24] 2026-03-05 22:31:53,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 17:32:24] 2026-03-05 22:31:53,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 17:32:24] 2026-03-05 22:31:53,903 | INFO     | aborting loop
[2026-03-05 17:32:24] 2026-03-05 22:31:54,303 | INFO     | all payload control threads have been joined
[2026-03-05 17:32:24] 2026-03-05 22:31:54,897 | INFO     | all data control threads have been joined
[2026-03-05 17:32:24] 2026-03-05 22:31:54,908 | INFO     | [job] retrieve thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:54,909 | INFO     | [job] job monitor thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 17:32:24] 2026-03-05 22:31:55,250 | INFO     | [data] copytool_in thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,305 | INFO     | [payload] control thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,537 | INFO     | all job control threads have been joined
[2026-03-05 17:32:24] 2026-03-05 22:31:55,591 | INFO     | [payload] failed_post thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,782 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,903 | INFO     | [data] control thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:55,908 | INFO     | [data] copytool_out thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,131 | INFO     | [job] validate thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,283 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,347 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,488 | INFO     | [payload] validate_post thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,543 | INFO     | [job] control thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:56,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 17:32:24] 2026-03-05 22:31:57,753 | INFO     | [job] queue monitor thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:31:59,088 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:32:04,811 | INFO     | job.realtimelogging is not enabled
[2026-03-05 17:32:24] 2026-03-05 22:32:05,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 17:32:24] 2026-03-05 22:32:09,705 | INFO     | [monitor] cgroup control has ended
[2026-03-05 17:32:24] 2026-03-05 22:32:09,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126768784758592)>', '<ExcThread(monitor, started 126768165938944)>']
[2026-03-05 17:32:24] 2026-03-05 22:32:14,984 | INFO     | all workflow threads have been joined
[2026-03-05 17:32:24] 2026-03-05 22:32:14,985 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 17:32:24] 2026-03-05 22:32:14,985 | INFO     | traces error code: 0
[2026-03-05 17:32:24] 2026-03-05 22:32:14,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 17:32:24] 2026-03-05 22:32:24,007 | INFO     | PID=224244 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 17:32:24] 2026-03-05 22:32:24,007 | INFO     | .. there are 4 such processes running
[2026-03-05 17:32:24] 2026-03-05 22:32:24,007 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 17:32:24] 2026-03-05 22:32:24,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 17:32:24] 2026-03-05 22:32:24,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 17:32:24] 2026-03-05 22:32:24,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 17:32:24] 2026-03-05 22:32:24,008 | INFO     | [monitor] control thread has ended
[2026-03-05 17:32:24] 2026-03-05 22:32:24,106 [wrapper] ==== pilot stdout END ====
[2026-03-05 17:32:24] 2026-03-05 22:32:24,110 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 17:32:24] 2026-03-05 22:32:24,113 [wrapper] pilotpid: 224244
[2026-03-05 17:32:24] 2026-03-05 22:32:24,116 [wrapper] Pilot exit status: 0
[2026-03-05 17:32:24] 2026-03-05 22:32:24,127 [wrapper] pandaids: 7038577150
[2026-03-05 17:32:24] 2026-03-05 22:32:24,172 [wrapper] cleanup supervisor_pilot  264525 224245
[2026-03-05 17:32:24] 2026-03-05 22:32:24,175 [wrapper] Test setup, not cleaning
[2026-03-05 17:32:24] 2026-03-05 22:32:24,178 [wrapper] apfmon messages muted
[2026-03-05 17:32:24] 2026-03-05 22:32:24,181 [wrapper] ==== wrapper stdout END ====
[2026-03-05 17:32:24] 2026-03-05 22:32:24,184 [wrapper] ==== wrapper stderr END ====
[2026-03-05 17:32:24]  *** Error codes and diagnostics ***
[2026-03-05 17:32:24]     "exeErrorCode": 0,
[2026-03-05 17:32:24]     "exeErrorDiag": "",
[2026-03-05 17:32:24]     "pilotErrorCode": 0,
[2026-03-05 17:32:24]     "pilotErrorDiag": "",
[2026-03-05 17:32:24]  *** Listing of results directory ***
[2026-03-05 17:32:24] total 331160
[2026-03-05 17:32:24] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  4 04:32 pilot3.tar.gz
[2026-03-05 17:32:24] -rwx------ 1 whitlerd whitlerd     36322 Mar  4 04:33 runpilot2-wrapper.sh
[2026-03-05 17:32:24] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  4 04:34 queuedata.json
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  5 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 17:32:24] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  5 16:09 run_atlas
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  5 16:09 job.xml
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd 188235990 Mar  5 16:09 EVNT.48700856._000114.pool.root.1
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  5 16:09 start_atlas.sh
[2026-03-05 17:32:24] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  5 16:09 shared
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd    597942 Mar  5 16:09 input.tar.gz
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  5 16:09 boinc_setup_complete
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd      9344 Mar  5 16:09 init_data.xml
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  5 16:09 boinc_lockfile
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd      2521 Mar  5 16:09 pandaJob.out
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd    998536 Mar  5 16:09 agis_schedconf.cvmfs.json
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd   1521291 Mar  5 16:09 agis_ddmendpoints.agis.ALL.json
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd       439 Mar  5 16:10 workernode_map.json
[2026-03-05 17:32:24] drwx------ 5 whitlerd whitlerd      4096 Mar  5 16:10 pilot3
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd 144912469 Mar  5 17:31 HITS.48700858._002941.pool.root.1
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar  5 17:31 boinc_task_state.xml
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd      1034 Mar  5 17:31 memory_monitor_summary.json
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd    278729 Mar  5 17:31 log.48700858._002941.job.log.tgz.1
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd      6341 Mar  5 17:31 heartbeat.json
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  5 17:32 wrapper_checkpoint.txt
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  5 17:32 boinc_mmap_file
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd        95 Mar  5 17:32 pilot_heartbeat.json
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd       821 Mar  5 17:32 pilotlog.txt
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd    731198 Mar  5 17:32 log.48700858._002941.job.log.1
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd       357 Mar  5 17:32 output.list
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  5 17:32 runtime_log
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd   1024000 Mar  5 17:32 result.tar.gz
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  5 17:32 runtime_log.err
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd       649 Mar  5 17:32 IFkNDmYmxH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmv1JLDm4IXNQn.diag
[2026-03-05 17:32:24] -rw-rw-r-- 1 whitlerd whitlerd     21418 Mar  5 17:32 stderr.txt
[2026-03-05 17:32:24] HITS file was successfully produced:
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd 144912469 Mar  5 17:31 shared/HITS.pool.root.1
[2026-03-05 17:32:24]  *** Contents of shared directory: ***
[2026-03-05 17:32:24] total 326956
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd 188235990 Mar  5 16:09 ATLAS.root_0
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  5 16:09 start_atlas.sh
[2026-03-05 17:32:24] -rw-r--r-- 2 whitlerd whitlerd    597942 Mar  5 16:09 input.tar.gz
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd 144912469 Mar  5 17:31 HITS.pool.root.1
[2026-03-05 17:32:24] -rw------- 1 whitlerd whitlerd   1024000 Mar  5 17:32 result.tar.gz
17:32:25 (220340): run_atlas exited; CPU time 18927.267454
17:32:25 (220340): called boinc_finish(0)

</stderr_txt>
]]>

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