Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:38:59 (2247841): wrapper (7.7.26015): starting
08:38:59 (2247841): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 08:38:59] Arguments: --nthreads 4
[2026-03-06 08:38:59] Threads: 4
[2026-03-06 08:38:59] Checking for CVMFS
[2026-03-06 08:38:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 08:39:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 08:39:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 08:39:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 08:39:00] 2.9.2.0 150552 12364 99352 156949 1 50 32181988 36864001 0 130560 0 5369919 99.984 462197 11761 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-06 08:39:00] CVMFS is ok
[2026-03-06 08:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 08:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 08:39:00] Further information can be found at the LHC@home message board.
[2026-03-06 08:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 08:39:00] Checking for apptainer binary...
[2026-03-06 08:39:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 08:39:00] Running /usr/bin/apptainer --version
[2026-03-06 08:39:00] apptainer version 1.4.1-1.1
[2026-03-06 08:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 08:39:00] thA317
[2026-03-06 08:39:00] apptainer works
[2026-03-06 08:39:00] Set ATHENA_PROC_NUMBER=4
[2026-03-06 08:39:00] Set ATHENA_CORE_NUMBER=4
[2026-03-06 08:39:00] Starting ATLAS job with PandaID=7038763285
[2026-03-06 08:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 09:46:36]  *** The last 200 lines of the pilot log: ***
[2026-03-06 09:46:36] 2026-03-06 08:46:04,980 | INFO     | will attempt to kill all subprocesses of pid=2256448
[2026-03-06 09:46:36] 2026-03-06 08:46:05,039 | INFO     | process IDs to be killed: [2256448] (in reverse order)
[2026-03-06 09:46:36] 2026-03-06 08:46:05,077 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 09:46:36] 2026-03-06 08:46:05,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 09:46:36] 2026-03-06 08:46:05,079 | INFO     | did not find any defunct processes belonging to 2256448
[2026-03-06 09:46:36] 2026-03-06 08:46:05,081 | INFO     | did not find any defunct processes belonging to 2256448
[2026-03-06 09:46:36] 2026-03-06 08:46:05,081 | INFO     | ready for new job
[2026-03-06 09:46:36] 2026-03-06 08:46:05,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 09:46:36] 2026-03-06 08:46:05,082 | INFO     | **************************************
[2026-03-06 09:46:36] 2026-03-06 08:46:05,082 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 09:46:36] 2026-03-06 08:46:05,082 | INFO     | **************************************
[2026-03-06 09:46:36] 2026-03-06 08:46:05,082 | INFO     | 
[2026-03-06 09:46:36] 2026-03-06 08:46:05,083 | INFO     | architecture information:
[2026-03-06 09:46:36] 2026-03-06 08:46:05,083 | INFO     | executing command: cat /etc/os-release
[2026-03-06 09:46:36] 2026-03-06 08:46:05,098 | INFO     | cat /etc/os-release:
[2026-03-06 09:46:36] NAME="CentOS Linux"
[2026-03-06 09:46:36] VERSION="7 (Core)"
[2026-03-06 09:46:36] ID="centos"
[2026-03-06 09:46:36] ID_LIKE="rhel fedora"
[2026-03-06 09:46:36] VERSION_ID="7"
[2026-03-06 09:46:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 09:46:36] ANSI_COLOR="0;31"
[2026-03-06 09:46:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 09:46:36] HOME_URL="https://www.centos.org/"
[2026-03-06 09:46:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 09:46:36] 
[2026-03-06 09:46:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 09:46:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 09:46:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 09:46:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 09:46:36] 
[2026-03-06 09:46:36] 2026-03-06 08:46:05,099 | INFO     | **************************************
[2026-03-06 09:46:36] 2026-03-06 08:46:05,601 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-06 09:46:36] 2026-03-06 08:46:05,620 | INFO     | sufficient remaining disk space (226260680704 B)
[2026-03-06 09:46:36] 2026-03-06 08:46:05,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 09:46:36] 2026-03-06 08:46:05,620 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 09:46:36] 2026-03-06 08:46:05,620 | INFO     | update_server=False
[2026-03-06 09:46:36] 2026-03-06 08:46:05,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 09:46:36] 2026-03-06 08:46:05,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 09:46:36] 2026-03-06 08:46:05,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 09:46:36] 2026-03-06 08:46:06,044 | INFO     | all data control threads have been joined
[2026-03-06 09:46:36] 2026-03-06 08:46:06,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 09:46:36] 2026-03-06 08:46:06,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 09:46:36] 2026-03-06 08:46:06,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 09:46:36] 2026-03-06 08:46:06,110 | INFO     | will abort loop
[2026-03-06 09:46:36] 2026-03-06 08:46:06,626 | INFO     | [job] retrieve thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:06,626 | INFO     | [job] queue monitor thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:06,975 | INFO     | all payload control threads have been joined
[2026-03-06 09:46:36] 2026-03-06 08:46:07,048 | INFO     | [data] control thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,110 | INFO     | [job] job monitor thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,116 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,149 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,160 | INFO     | [job] validate thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,232 | INFO     | [payload] failed_post thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,255 | INFO     | all job control threads have been joined
[2026-03-06 09:46:36] 2026-03-06 08:46:07,257 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,497 | INFO     | [data] copytool_in thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,626 | INFO     | [data] copytool_out thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,762 | INFO     | [payload] validate_post thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:07,980 | INFO     | [payload] control thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:08,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 09:46:36] 2026-03-06 08:46:08,261 | INFO     | [job] control thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:12,244 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:16,492 | INFO     | job.realtimelogging is not enabled
[2026-03-06 09:46:36] 2026-03-06 08:46:16,555 | INFO     | [monitor] cgroup control has ended
[2026-03-06 09:46:36] 2026-03-06 08:46:17,498 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 09:46:36] 2026-03-06 08:46:18,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901618755392)>', '<ExcThread(monitor, started 139900875683584)>']
[2026-03-06 09:46:36] 2026-03-06 08:46:23,453 | INFO     | all workflow threads have been joined
[2026-03-06 09:46:36] 2026-03-06 08:46:23,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 09:46:36] 2026-03-06 08:46:23,454 | INFO     | traces error code: 0
[2026-03-06 09:46:36] 2026-03-06 08:46:23,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 09:46:36] 2026-03-06 08:46:36,633 | INFO     | PID=2251945 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 09:46:36] 2026-03-06 08:46:36,634 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 09:46:36] 2026-03-06 08:46:36,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 09:46:36] 2026-03-06 08:46:36,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 09:46:36] 2026-03-06 08:46:36,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 09:46:36] 2026-03-06 08:46:36,634 | INFO     | [monitor] control thread has ended
[2026-03-06 09:46:36] 2026-03-06 08:46:36,713 [wrapper] ==== pilot stdout END ====
[2026-03-06 09:46:36] 2026-03-06 08:46:36,717 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 09:46:36] 2026-03-06 08:46:36,721 [wrapper] pilotpid: 2251945
[2026-03-06 09:46:36] 2026-03-06 08:46:36,725 [wrapper] Pilot exit status: 0
[2026-03-06 09:46:36] 2026-03-06 08:46:36,737 [wrapper] pandaids: 7038763285
[2026-03-06 09:46:36] 2026-03-06 08:46:36,761 [wrapper] cleanup supervisor_pilot 2263450 2251946
[2026-03-06 09:46:36] 2026-03-06 08:46:36,765 [wrapper] Test setup, not cleaning
[2026-03-06 09:46:36] 2026-03-06 08:46:36,769 [wrapper] apfmon messages muted
[2026-03-06 09:46:36] 2026-03-06 08:46:36,773 [wrapper] ==== wrapper stdout END ====
[2026-03-06 09:46:36] 2026-03-06 08:46:36,777 [wrapper] ==== wrapper stderr END ====
[2026-03-06 09:46:36]  *** Error codes and diagnostics ***
[2026-03-06 09:46:36]     "exeErrorCode": 0,
[2026-03-06 09:46:36]     "exeErrorDiag": "",
[2026-03-06 09:46:36]     "pilotErrorCode": 0,
[2026-03-06 09:46:36]     "pilotErrorDiag": "",
[2026-03-06 09:46:36]  *** Listing of results directory ***
[2026-03-06 09:46:36] total 610176
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc    584627 Mar  5 21:04 pilot3.tar.gz
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc      5111 Mar  5 21:08 queuedata.json
[2026-03-06 09:46:36] -rwx------ 1 boinc boinc     36322 Mar  5 21:09 runpilot2-wrapper.sh
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc       100 Mar  6 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 09:46:36] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 08:38 run_atlas
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc       105 Mar  6 08:38 job.xml
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc 436972188 Mar  6 08:38 EVNT.46701403._000227.pool.root.1
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc    597961 Mar  6 08:38 input.tar.gz
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc     15845 Mar  6 08:38 start_atlas.sh
[2026-03-06 09:46:36] drwxrwx--x 2 boinc boinc      4096 Mar  6 08:38 shared
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc         0 Mar  6 08:38 boinc_setup_complete
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc      6376 Mar  6 08:38 init_data.xml
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc         0 Mar  6 08:38 boinc_lockfile
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc      2564 Mar  6 08:39 pandaJob.out
[2026-03-06 09:46:36] -rw------- 1 boinc boinc    998137 Mar  6 08:39 agis_schedconf.cvmfs.json
[2026-03-06 09:46:36] -rw------- 1 boinc boinc   1521291 Mar  6 08:39 agis_ddmendpoints.agis.ALL.json
[2026-03-06 09:46:36] -rw------- 1 boinc boinc       419 Mar  6 08:39 workernode_map.json
[2026-03-06 09:46:36] drwx------ 5 boinc boinc      4096 Mar  6 08:39 pilot3
[2026-03-06 09:46:36] -rw------- 1 boinc boinc 182164293 Mar  6 09:45 HITS.48955006._011334.pool.root.1
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc       530 Mar  6 09:45 boinc_task_state.xml
[2026-03-06 09:46:36] -rw------- 1 boinc boinc      1022 Mar  6 09:45 memory_monitor_summary.json
[2026-03-06 09:46:36] -rw------- 1 boinc boinc    282066 Mar  6 09:45 log.48955006._011334.job.log.tgz.1
[2026-03-06 09:46:36] -rw------- 1 boinc boinc      6315 Mar  6 09:46 heartbeat.json
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc      8192 Mar  6 09:46 boinc_mmap_file
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc        27 Mar  6 09:46 wrapper_checkpoint.txt
[2026-03-06 09:46:36] -rw------- 1 boinc boinc       747 Mar  6 09:46 pilotlog.txt
[2026-03-06 09:46:36] -rw------- 1 boinc boinc        95 Mar  6 09:46 pilot_heartbeat.json
[2026-03-06 09:46:36] -rw------- 1 boinc boinc    598111 Mar  6 09:46 log.48955006._011334.job.log.1
[2026-03-06 09:46:36] -rw------- 1 boinc boinc       357 Mar  6 09:46 output.list
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc       620 Mar  6 09:46 runtime_log
[2026-03-06 09:46:36] -rw------- 1 boinc boinc    901120 Mar  6 09:46 result.tar.gz
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc      8896 Mar  6 09:46 runtime_log.err
[2026-03-06 09:46:36] -rw------- 1 boinc boinc       657 Mar  6 09:46 dbbNDmmBUI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtpMLDmlTQjun.diag
[2026-03-06 09:46:36] -rw-r--r-- 1 boinc boinc     10517 Mar  6 09:46 stderr.txt
[2026-03-06 09:46:36] HITS file was successfully produced:
[2026-03-06 09:46:36] -rw------- 1 boinc boinc 182164293 Mar  6 09:45 shared/HITS.pool.root.1
[2026-03-06 09:46:36]  *** Contents of shared directory: ***
[2026-03-06 09:46:36] total 606116
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc 436972188 Mar  6 08:38 ATLAS.root_0
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc    597961 Mar  6 08:38 input.tar.gz
[2026-03-06 09:46:36] -rw-r--r-- 2 boinc boinc     15845 Mar  6 08:38 start_atlas.sh
[2026-03-06 09:46:36] -rw------- 1 boinc boinc 182164293 Mar  6 09:45 HITS.pool.root.1
[2026-03-06 09:46:36] -rw------- 1 boinc boinc    901120 Mar  6 09:46 result.tar.gz
09:46:38 (2247841): run_atlas exited; CPU time 15090.154710
09:46:38 (2247841): called boinc_finish(0)

</stderr_txt>
]]>

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