Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:13:24 (3667415): wrapper (7.7.26015): starting
11:13:24 (3667415): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 11:13:24] Arguments: --nthreads 4
[2026-03-06 11:13:24] Threads: 4
[2026-03-06 11:13:24] Checking for CVMFS
[2026-03-06 11:13:24] No cvmfs_config command found, will try listing directly
[2026-03-06 11:13:24] CVMFS is ok
[2026-03-06 11:13:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 11:13:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 11:13:24] Further information can be found at the LHC@home message board.
[2026-03-06 11:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 11:13:24] Checking for apptainer binary...
[2026-03-06 11:13:24] which: no apptainer in ((null))
[2026-03-06 11:13:24] apptainer is not installed, using version from CVMFS
[2026-03-06 11:13:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 11:13:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-06 11:13:24] apptainer works
[2026-03-06 11:13:24] Set ATHENA_PROC_NUMBER=4
[2026-03-06 11:13:24] Set ATHENA_CORE_NUMBER=4
[2026-03-06 11:13:24] Starting ATLAS job with PandaID=7038645138
[2026-03-06 11:13:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 14:07:05]  *** The last 200 lines of the pilot log: ***
[2026-03-06 14:07:05] 2026-03-06 13:06:03,693 | INFO     | extracted standard info from prmon json
[2026-03-06 14:07:05] 2026-03-06 13:06:03,693 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 14:07:05] 2026-03-06 13:06:03,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 14:07:05] 2026-03-06 13:06:03,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 14:07:05] 2026-03-06 13:06:03,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 14:07:05] 2026-03-06 13:06:03,696 | INFO     | fitting pss+swap vs Time
[2026-03-06 14:07:05] 2026-03-06 13:06:03,697 | INFO     | sum of square deviations: 1496660620.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,698 | INFO     | sum of deviations: 17686770904.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,698 | INFO     | mean x: 1772797172.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,698 | INFO     | mean y: 2320169.4378698226
[2026-03-06 14:07:05] 2026-03-06 13:06:03,698 | INFO     | intersect: -20947691490.802834
[2026-03-06 14:07:05] 2026-03-06 13:06:03,698 | INFO     | chi2: 1.228788894291484
[2026-03-06 14:07:05] 2026-03-06 13:06:03,699 | INFO     | sum of square deviations: 1367709365.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | sum of deviations: 17082777879.000002
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | mean x: 1772797019.5
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | mean y: 2319454.93902439
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | intersect: -22140029265.96173
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | chi2: 1.2297493778378983
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | current chi2=1.2297493778378983 (change=-0.07816505755190167 %)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,700 | INFO     | right removable region: 163
[2026-03-06 14:07:05] 2026-03-06 13:06:03,701 | INFO     | sum of square deviations: 1367709365.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | sum of deviations: -2271353239.000001
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | mean x: 1772797324.5
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | mean y: 2343407.073170732
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | intersect: 2946425715.8856215
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | chi2: 0.005515070722686271
[2026-03-06 14:07:05] 2026-03-06 13:06:03,702 | INFO     | current chi2=0.005515070722686271 (change=99.55117833923245 %)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,703 | INFO     | sum of square deviations: 1246386160.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,703 | INFO     | sum of deviations: -1020079698.0000002
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | mean x: 1772797477.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | mean y: 2341844.8427672954
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | intersect: 1453252303.4066863
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | chi2: 0.0030002328049624533
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | current chi2=0.0030002328049624533 (change=45.599377490827436 %)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,704 | INFO     | sum of square deviations: 1132458442.5
[2026-03-06 14:07:05] 2026-03-06 13:06:03,705 | INFO     | sum of deviations: -548002497.4999998
[2026-03-06 14:07:05] 2026-03-06 13:06:03,705 | INFO     | mean x: 1772797629.5
[2026-03-06 14:07:05] 2026-03-06 13:06:03,705 | INFO     | mean y: 2341212.2792207794
[2026-03-06 14:07:05] 2026-03-06 13:06:03,706 | INFO     | intersect: 860207154.2588792
[2026-03-06 14:07:05] 2026-03-06 13:06:03,706 | INFO     | chi2: 0.002741127234701726
[2026-03-06 14:07:05] 2026-03-06 13:06:03,706 | INFO     | current chi2=0.002741127234701726 (change=8.636182160003083 %)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,706 | INFO     | left removable region: 30
[2026-03-06 14:07:05] 2026-03-06 13:06:03,706 | INFO     | sum of square deviations: 729472282.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,707 | INFO     | sum of deviations: 1028626834.9999998
[2026-03-06 14:07:05] 2026-03-06 13:06:03,707 | INFO     | monitor loop #743: job 0:7038645138 is in state 'finished'
[2026-03-06 14:07:05] 2026-03-06 13:06:03,708 | INFO     | mean x: 1772797904.0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,708 | INFO     | mean y: 2338413.210526316
[2026-03-06 14:07:05] 2026-03-06 13:06:03,708 | INFO     | intersect: -2497478978.1871543
[2026-03-06 14:07:05] 2026-03-06 13:06:03,709 | INFO     | chi2: 0.00054361382441976
[2026-03-06 14:07:05] 2026-03-06 13:06:03,709 | INFO     | current memory leak: 1.41 B/s (using 133 data points, chi2=0.00)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,709 | INFO     | could have reported an average CPU frequency of 2570 MHz (9 samples)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | ..............................
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . Timing measurements:
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . get job = 0 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . initial setup = 6 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . payload setup = 7 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . stage-in = 0 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . payload execution = 10314 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . stage-out = 0 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | . log creation = 0 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,710 | INFO     | ..............................
[2026-03-06 14:07:05] 2026-03-06 13:06:03,800 | INFO     | 
[2026-03-06 14:07:05] 2026-03-06 13:06:03,800 | INFO     | job summary report
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | --------------------------------------------------
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | PanDA job id: 7038645138
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | task id: 48955006
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | errors: (none)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | pilot state: finished 
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | transexitcode: 0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | exeerrorcode: 0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | exeerrordiag: 
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | exitcode: 0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | exitmsg: OK
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | cpuconsumptiontime: 39287 s
[2026-03-06 14:07:05] 2026-03-06 13:06:03,801 | INFO     | nevents: 400
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | neventsw: 0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | pid: 3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | pgrp: 3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | corecount: 4
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | event service: False
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | sizes: {0: 2295812, 11: 2295812, 10325: 2324485, 10327: 2333505, 10329: 2333561, 10330: 2333819}
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | --------------------------------------------------
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | 
[2026-03-06 14:07:05] 2026-03-06 13:06:03,802 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-06 14:07:05] 2026-03-06 13:06:03,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | job 7038645138 has completed (purged errors)
[2026-03-06 14:07:05] 2026-03-06 13:06:03,827 | INFO     | overall cleanup function is called
[2026-03-06 14:07:05] 2026-03-06 13:06:04,835 | INFO     | --- collectZombieJob: --- 10, [3676717]
[2026-03-06 14:07:05] 2026-03-06 13:06:04,836 | INFO     | zombie collector waiting for pid 3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:04,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 14:07:05] 2026-03-06 13:06:04,836 | INFO     | collected zombie processes
[2026-03-06 14:07:05] 2026-03-06 13:06:04,836 | INFO     | will attempt to kill all subprocesses of pid=3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:05,171 | INFO     | process IDs to be killed: [3676717] (in reverse order)
[2026-03-06 14:07:05] 2026-03-06 13:06:05,301 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 14:07:05] 2026-03-06 13:06:05,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 14:07:05] 2026-03-06 13:06:05,313 | INFO     | did not find any defunct processes belonging to 3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:05,324 | INFO     | did not find any defunct processes belonging to 3676717
[2026-03-06 14:07:05] 2026-03-06 13:06:05,324 | INFO     | ready for new job
[2026-03-06 14:07:05] 2026-03-06 13:06:05,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 14:07:05] 2026-03-06 13:06:05,327 | INFO     | **************************************
[2026-03-06 14:07:05] 2026-03-06 13:06:05,327 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 14:07:05] 2026-03-06 13:06:05,327 | INFO     | **************************************
[2026-03-06 14:07:05] 2026-03-06 13:06:05,327 | INFO     | 
[2026-03-06 14:07:05] 2026-03-06 13:06:05,331 | INFO     | architecture information:
[2026-03-06 14:07:05] 2026-03-06 13:06:05,331 | INFO     | executing command: cat /etc/os-release
[2026-03-06 14:07:05] 2026-03-06 13:06:05,346 | INFO     | cat /etc/os-release:
[2026-03-06 14:07:05] NAME="CentOS Linux"
[2026-03-06 14:07:05] VERSION="7 (Core)"
[2026-03-06 14:07:05] ID="centos"
[2026-03-06 14:07:05] ID_LIKE="rhel fedora"
[2026-03-06 14:07:05] VERSION_ID="7"
[2026-03-06 14:07:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 14:07:05] ANSI_COLOR="0;31"
[2026-03-06 14:07:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 14:07:05] HOME_URL="https://www.centos.org/"
[2026-03-06 14:07:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 14:07:05] 
[2026-03-06 14:07:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 14:07:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 14:07:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 14:07:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 14:07:05] 
[2026-03-06 14:07:05] 2026-03-06 13:06:05,346 | INFO     | **************************************
[2026-03-06 14:07:05] 2026-03-06 13:06:05,849 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-06 14:07:05] 2026-03-06 13:06:05,867 | INFO     | sufficient remaining disk space (23353884672 B)
[2026-03-06 14:07:05] 2026-03-06 13:06:05,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 14:07:05] 2026-03-06 13:06:05,867 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 14:07:05] 2026-03-06 13:06:05,867 | INFO     | update_server=False
[2026-03-06 14:07:05] 2026-03-06 13:06:05,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 14:07:05] 2026-03-06 13:06:06,211 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 14:07:05] 2026-03-06 13:06:06,211 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 14:07:05] 2026-03-06 13:06:06,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 14:07:05] 2026-03-06 13:06:06,211 | INFO     | will abort loop
[2026-03-06 14:07:05] 2026-03-06 13:06:06,289 | INFO     | all data control threads have been joined
[2026-03-06 14:07:05] 2026-03-06 13:06:06,600 | INFO     | all payload control threads have been joined
[2026-03-06 14:07:05] 2026-03-06 13:06:06,709 | INFO     | all job control threads have been joined
[2026-03-06 14:07:05] 2026-03-06 13:06:06,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 14:07:05] 2026-03-06 13:06:06,873 | INFO     | [job] retrieve thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:06,990 | INFO     | [job] validate thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,216 | INFO     | [job] job monitor thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,290 | INFO     | [data] control thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,331 | INFO     | [payload] failed_post thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,510 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,606 | INFO     | [payload] control thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,714 | INFO     | [job] control thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,867 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,941 | INFO     | [data] copytool_in thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:07,941 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:08,415 | INFO     | [payload] validate_post thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:08,718 | INFO     | [data] copytool_out thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:08,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 14:07:05] 2026-03-06 13:06:08,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 14:07:05] 2026-03-06 13:06:09,816 | INFO     | [job] queue monitor thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:12,754 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:16,185 | INFO     | job.realtimelogging is not enabled
[2026-03-06 14:07:05] 2026-03-06 13:06:17,190 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 14:07:05] 2026-03-06 13:06:35,866 | INFO     | PID=3671526 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 14:07:05] 2026-03-06 13:06:35,866 | INFO     | .. there are 12 such processes running
[2026-03-06 14:07:05] 2026-03-06 13:06:35,866 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 14:07:05] 2026-03-06 13:06:35,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 14:07:05] 2026-03-06 13:06:35,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 14:07:05] 2026-03-06 13:06:59,347 | INFO     | [monitor] cgroup control has ended
[2026-03-06 14:07:05] 2026-03-06 13:06:59,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23233913165632)>', '<ExcThread(monitor, started 23233668843264)>']
[2026-03-06 14:07:05] 2026-03-06 13:06:59,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 14:07:05] 2026-03-06 13:06:59,985 | INFO     | [monitor] control thread has ended
[2026-03-06 14:07:05] 2026-03-06 13:07:04,955 | INFO     | all workflow threads have been joined
[2026-03-06 14:07:05] 2026-03-06 13:07:04,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 14:07:05] 2026-03-06 13:07:04,955 | INFO     | traces error code: 0
[2026-03-06 14:07:05] 2026-03-06 13:07:04,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 14:07:05] 2026-03-06 13:07:05,111 [wrapper] ==== pilot stdout END ====
[2026-03-06 14:07:05] 2026-03-06 13:07:05,114 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 14:07:05] 2026-03-06 13:07:05,116 [wrapper] pilotpid: 3671526
[2026-03-06 14:07:05] 2026-03-06 13:07:05,119 [wrapper] Pilot exit status: 0
[2026-03-06 14:07:05] 2026-03-06 13:07:05,129 [wrapper] pandaids: 7038645138
[2026-03-06 14:07:05] 2026-03-06 13:07:05,206 [wrapper] cleanup supervisor_pilot 3923492 3671527
[2026-03-06 14:07:05] 2026-03-06 13:07:05,208 [wrapper] Test setup, not cleaning
[2026-03-06 14:07:05] 2026-03-06 13:07:05,211 [wrapper] apfmon messages muted
[2026-03-06 14:07:05] 2026-03-06 13:07:05,214 [wrapper] ==== wrapper stdout END ====
[2026-03-06 14:07:05] 2026-03-06 13:07:05,216 [wrapper] ==== wrapper stderr END ====
[2026-03-06 14:07:05]  *** Error codes and diagnostics ***
[2026-03-06 14:07:05]     "exeErrorCode": 0,
[2026-03-06 14:07:05]     "exeErrorDiag": "",
[2026-03-06 14:07:05]     "pilotErrorCode": 0,
[2026-03-06 14:07:05]     "pilotErrorDiag": "",
[2026-03-06 14:07:05]  *** Listing of results directory ***
[2026-03-06 14:07:05] total 619404
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc    584627 Mar  5 16:50 pilot3.tar.gz
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc      5111 Mar  5 16:53 queuedata.json
[2026-03-06 14:07:05] -rwx------. 1 boinc boinc     36322 Mar  5 16:54 runpilot2-wrapper.sh
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc       100 Mar  6 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 14:07:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 11:13 run_atlas
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc       105 Mar  6 11:13 job.xml
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc      6560 Mar  6 11:13 init_data.xml
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc 439309992 Mar  6 11:13 EVNT.46701403._000169.pool.root.1
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:13 start_atlas.sh
[2026-03-06 14:07:05] drwxrwx--x. 2 boinc boinc      4096 Mar  6 11:13 shared
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc    597956 Mar  6 11:13 input.tar.gz
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc         0 Mar  6 11:13 boinc_lockfile
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc      2562 Mar  6 11:13 pandaJob.out
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc    998145 Mar  6 11:13 agis_schedconf.cvmfs.json
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc   1521291 Mar  6 11:13 agis_ddmendpoints.agis.ALL.json
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc       448 Mar  6 11:13 workernode_map.json
[2026-03-06 14:07:05] drwx------. 5 boinc boinc      4096 Mar  6 11:13 pilot3
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc 187366231 Mar  6 14:05 HITS.48955006._008426.pool.root.1
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc      1031 Mar  6 14:05 memory_monitor_summary.json
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc       531 Mar  6 14:05 boinc_task_state.xml
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc    365487 Mar  6 14:06 log.48955006._008426.job.log.tgz.1
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc        95 Mar  6 14:06 pilot_heartbeat.json
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc      6401 Mar  6 14:06 heartbeat.json
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc      8192 Mar  6 14:06 boinc_mmap_file
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc        27 Mar  6 14:06 wrapper_checkpoint.txt
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc      5087 Mar  6 14:07 pilotlog.txt
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc   1464526 Mar  6 14:07 log.48955006._008426.job.log.1
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc       357 Mar  6 14:07 output.list
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc       620 Mar  6 14:07 runtime_log
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc   1843200 Mar  6 14:07 result.tar.gz
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc      9205 Mar  6 14:07 runtime_log.err
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc       666 Mar  6 14:07 VlCMDmfCQI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxIOLDmPI5pAn.diag
[2026-03-06 14:07:05] -rw-r--r--. 1 boinc boinc     20816 Mar  6 14:07 stderr.txt
[2026-03-06 14:07:05] HITS file was successfully produced:
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc 187366231 Mar  6 14:05 shared/HITS.pool.root.1
[2026-03-06 14:07:05]  *** Contents of shared directory: ***
[2026-03-06 14:07:05] total 614400
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc 439309992 Mar  6 11:13 ATLAS.root_0
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc     15845 Mar  6 11:13 start_atlas.sh
[2026-03-06 14:07:05] -rw-r--r--. 2 boinc boinc    597956 Mar  6 11:13 input.tar.gz
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc 187366231 Mar  6 14:05 HITS.pool.root.1
[2026-03-06 14:07:05] -rw-------. 1 boinc boinc   1843200 Mar  6 14:07 result.tar.gz
14:07:06 (3667415): run_atlas exited; CPU time 39711.770016
14:07:06 (3667415): called boinc_finish(0)

</stderr_txt>
]]>

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