Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:37:23 (3967238): wrapper (7.7.26015): starting
14:37:23 (3967238): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 14:37:23] Arguments: --nthreads 8
[2026-03-05 14:37:23] Threads: 8
[2026-03-05 14:37:23] Checking for CVMFS
[2026-03-05 14:37:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 14:37:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 14:37:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 14:37:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 14:37:27] 2.11.3.0 476926 171556 250460 156935 2 420 42243583 45568000 15036 130560 0 971842552 99.802 569273932 18226 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-05 14:37:27] CVMFS is ok
[2026-03-05 14:37:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 14:37:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 14:37:27] Further information can be found at the LHC@home message board.
[2026-03-05 14:37:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 14:37:27] Checking for apptainer binary...
[2026-03-05 14:37:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 14:37:27] Running /usr/bin/apptainer --version
[2026-03-05 14:37:27] apptainer version 1.4.1-1.el9
[2026-03-05 14:37:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 14:37:29] wns0002.triumf.lcg
[2026-03-05 14:37:29] apptainer works
[2026-03-05 14:37:29] Set ATHENA_PROC_NUMBER=8
[2026-03-05 14:37:29] Set ATHENA_CORE_NUMBER=8
[2026-03-05 14:37:29] Starting ATLAS job with PandaID=7038715490
[2026-03-05 14:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 14:46:03]  *** The last 200 lines of the pilot log: ***
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | wrong length of table data, x=[1772750519.0, 1772750580.0], y=[1965.0, 464460.0] (must be same and length>=4)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . Timing measurements:
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . get job = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . initial setup = 46 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload setup = 79 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-in = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload execution = 131 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-out = 2 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . log creation = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038715490/pilotlog.txt
[2026-03-05 14:46:03] 2026-03-05 22:45:28,878 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 14:46:03] - Log from pilotlog.txt -
[2026-03-05 14:46:03] 2026-03-05 22:45:28,597 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038715490/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | INFO     | extracted standard info from prmon json
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | wrong length of table data, x=[1772750519.0, 1772750580.0], y=[1965.0, 464460.0] (must be same and length>=4)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . Timing measurements:
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . get job = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . initial setup = 46 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload setup = 79 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-in = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload execution = 131 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-out = 2 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . log creation = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038715490/pilotlog.txt
[2026-03-05 14:46:03] 2026-03-05 22:45:28,879 | WARNING  | 
[2026-03-05 14:46:03] [begin log extracts]
[2026-03-05 14:46:03] - Log from pilotlog.txt -
[2026-03-05 14:46:03] 2026-03-05 22:45:28,597 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038715490/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | INFO     | extracted standard info from prmon json
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 14:46:03] 2026-03-05 22:45:28,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | WARNING  | wrong length of table data, x=[1772750519.0, 1772750580.0], y=[1965.0, 464460.0] (must be same and length>=4)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,621 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . Timing measurements:
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . get job = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . initial setup = 46 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload setup = 79 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-in = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . payload execution = 131 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . stage-out = 2 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | . log creation = 0 s
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | ..............................
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 14:46:03] 2026-03-05 22:45:28,622 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038715490/pilotlog.txt
[2026-03-05 14:46:03] [end log extracts]
[2026-03-05 14:46:03] 2026-03-05 22:45:28,879 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 14:46:03] 2026-03-05 22:45:28,879 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 14:46:03] 2026-03-05 22:45:29,283 | INFO     | 
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | job summary report
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | --------------------------------------------------
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | PanDA job id: 7038715490
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | task id: 48955006
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 14:43:10,910 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | pilot state: failed 
[2026-03-05 14:46:03] 2026-03-05 22:45:29,285 | INFO     | transexitcode: 65
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | exeerrorcode: 65
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | exitcode: 65
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | cpuconsumptiontime: 16 s
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | nevents: 0
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | neventsw: 0
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | pid: 3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | pgrp: 3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | corecount: 8
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | event service: False
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | sizes: {0: 2295369, 2: 2295397, 4: 2295397, 5: 2295886, 16: 2295886, 215: 2319253, 218: 2323545, 219: 2323573, 336: 2323739}
[2026-03-05 14:46:03] 2026-03-05 22:45:29,286 | INFO     | --------------------------------------------------
[2026-03-05 14:46:03] 2026-03-05 22:45:29,287 | INFO     | 
[2026-03-05 14:46:03] 2026-03-05 22:45:29,287 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 14:46:03] 2026-03-05 22:45:29,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 14:46:03] 2026-03-05 22:45:29,487 | INFO     | job 7038715490 has completed (purged errors)
[2026-03-05 14:46:03] 2026-03-05 22:45:29,487 | INFO     | overall cleanup function is called
[2026-03-05 14:46:03] 2026-03-05 22:45:30,494 | INFO     | --- collectZombieJob: --- 10, [3976792]
[2026-03-05 14:46:03] 2026-03-05 22:45:30,494 | INFO     | zombie collector waiting for pid 3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:30,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 14:46:03] 2026-03-05 22:45:30,494 | INFO     | collected zombie processes
[2026-03-05 14:46:03] 2026-03-05 22:45:30,494 | INFO     | will attempt to kill all subprocesses of pid=3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:32,175 | INFO     | process IDs to be killed: [3976792] (in reverse order)
[2026-03-05 14:46:03] 2026-03-05 22:45:32,529 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 14:46:03] 2026-03-05 22:45:32,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 14:46:03] 2026-03-05 22:45:32,566 | INFO     | did not find any defunct processes belonging to 3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:32,624 | INFO     | did not find any defunct processes belonging to 3976792
[2026-03-05 14:46:03] 2026-03-05 22:45:32,624 | INFO     | ready for new job
[2026-03-05 14:46:03] 2026-03-05 22:45:32,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 14:46:03] 2026-03-05 22:45:32,626 | INFO     | **************************************
[2026-03-05 14:46:03] 2026-03-05 22:45:32,626 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 14:46:03] 2026-03-05 22:45:32,626 | INFO     | **************************************
[2026-03-05 14:46:03] 2026-03-05 22:45:32,626 | INFO     | 
[2026-03-05 14:46:03] 2026-03-05 22:45:32,627 | INFO     | architecture information:
[2026-03-05 14:46:03] 2026-03-05 22:45:32,659 | INFO     | executing command: cat /etc/os-release
[2026-03-05 14:46:03] 2026-03-05 22:45:32,865 | INFO     | cat /etc/os-release:
[2026-03-05 14:46:03] NAME="CentOS Linux"
[2026-03-05 14:46:03] VERSION="7 (Core)"
[2026-03-05 14:46:03] ID="centos"
[2026-03-05 14:46:03] ID_LIKE="rhel fedora"
[2026-03-05 14:46:03] VERSION_ID="7"
[2026-03-05 14:46:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 14:46:03] ANSI_COLOR="0;31"
[2026-03-05 14:46:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 14:46:03] HOME_URL="https://www.centos.org/"
[2026-03-05 14:46:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 14:46:03] 
[2026-03-05 14:46:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 14:46:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 14:46:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 14:46:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 14:46:03] 
[2026-03-05 14:46:03] 2026-03-05 22:45:32,865 | INFO     | **************************************
[2026-03-05 14:46:03] 2026-03-05 22:45:33,369 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 14:46:03] 2026-03-05 22:45:33,486 | INFO     | sufficient remaining disk space (1393109762048 B)
[2026-03-05 14:46:03] 2026-03-05 22:45:33,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 14:46:03] 2026-03-05 22:45:33,486 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 14:46:03] 2026-03-05 22:45:33,487 | INFO     | update_server=False
[2026-03-05 14:46:03] 2026-03-05 22:45:33,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 14:46:03] 2026-03-05 22:45:33,637 | INFO     | all job control threads have been joined
[2026-03-05 14:46:03] 2026-03-05 22:45:33,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 14:46:03] 2026-03-05 22:45:33,911 | INFO     | aborting loop
[2026-03-05 14:46:03] 2026-03-05 22:45:34,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 14:46:03] 2026-03-05 22:45:34,369 | INFO     | all data control threads have been joined
[2026-03-05 14:46:03] 2026-03-05 22:45:34,495 | INFO     | [job] retrieve thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:34,643 | INFO     | [job] control thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:34,747 | INFO     | all payload control threads have been joined
[2026-03-05 14:46:03] 2026-03-05 22:45:34,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 14:46:03] 2026-03-05 22:45:34,891 | INFO     | [data] copytool_in thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:34,917 | INFO     | [job] job monitor thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:34,970 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 14:46:03] 2026-03-05 22:45:35,306 | INFO     | [job] queue monitor thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,334 | INFO     | [payload] validate_post thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,368 | INFO     | [payload] failed_post thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,376 | INFO     | [data] control thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,463 | INFO     | [job] validate thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,599 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,735 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:35,753 | INFO     | [payload] control thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:36,478 | INFO     | [monitor] cgroup control has ended
[2026-03-05 14:46:03] 2026-03-05 22:45:36,866 | INFO     | [data] copytool_out thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:39,170 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 14:46:03] 2026-03-05 22:45:41,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213448644416)>', '<ExcThread(monitor, started 140213049333504)>']
[2026-03-05 14:46:03] 2026-03-05 22:45:46,225 | INFO     | all workflow threads have been joined
[2026-03-05 14:46:03] 2026-03-05 22:45:46,225 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 14:46:03] 2026-03-05 22:45:46,226 | INFO     | traces error code: 0
[2026-03-05 14:46:03] 2026-03-05 22:45:46,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 14:46:03] 2026-03-05 22:46:02,434 | INFO     | PID=3971346 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 14:46:03] 2026-03-05 22:46:02,434 | INFO     | .. there are 26 such processes running
[2026-03-05 14:46:03] 2026-03-05 22:46:02,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 14:46:03] 2026-03-05 22:46:02,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 14:46:03] 2026-03-05 22:46:02,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 14:46:03] 2026-03-05 22:46:02,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 14:46:03] 2026-03-05 22:46:02,442 | INFO     | [monitor] control thread has ended
[2026-03-05 14:46:03] 2026-03-05 22:46:03,183 [wrapper] ==== pilot stdout END ====
[2026-03-05 14:46:03] 2026-03-05 22:46:03,218 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 14:46:03] 2026-03-05 22:46:03,226 [wrapper] pilotpid: 3971346
[2026-03-05 14:46:03] 2026-03-05 22:46:03,228 [wrapper] Pilot exit status: 0
[2026-03-05 14:46:03] 2026-03-05 22:46:03,243 [wrapper] pandaids: 7038715490
[2026-03-05 14:46:03] 2026-03-05 22:46:03,434 [wrapper] cleanup supervisor_pilot 3971352 3971347
[2026-03-05 14:46:03] 2026-03-05 22:46:03,478 [wrapper] Test setup, not cleaning
[2026-03-05 14:46:03] 2026-03-05 22:46:03,496 [wrapper] apfmon messages muted
[2026-03-05 14:46:03] 2026-03-05 22:46:03,527 [wrapper] ==== wrapper stdout END ====
[2026-03-05 14:46:03] 2026-03-05 22:46:03,529 [wrapper] ==== wrapper stderr END ====
[2026-03-05 14:46:03]  *** Error codes and diagnostics ***
[2026-03-05 14:46:03]     "exeErrorCode": 65,
[2026-03-05 14:46:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 14:46:03]     "pilotErrorCode": 1305,
[2026-03-05 14:46:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 14:46:03]  *** Listing of results directory ***
[2026-03-05 14:46:03] total 429708
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc    584627 Mar  5 11:32 pilot3.tar.gz
[2026-03-05 14:46:03] -rwx------. 1 boinc boinc     36322 Mar  5 11:33 runpilot2-wrapper.sh
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc      5111 Mar  5 11:34 queuedata.json
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc       100 Mar  5 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 14:46:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 14:37 run_atlas
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc       105 Mar  5 14:37 job.xml
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc      6443 Mar  5 14:37 init_data.xml
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc 435843803 Mar  5 14:37 EVNT.46701403._000216.pool.root.1
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc     15845 Mar  5 14:37 start_atlas.sh
[2026-03-05 14:46:03] drwxrwx--x. 2 boinc boinc      4096 Mar  5 14:37 shared
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc    597956 Mar  5 14:37 input.tar.gz
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc         0 Mar  5 14:37 boinc_lockfile
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc      2564 Mar  5 14:37 pandaJob.out
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc    998560 Mar  5 14:38 agis_schedconf.cvmfs.json
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc   1521291 Mar  5 14:38 agis_ddmendpoints.agis.ALL.json
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc       441 Mar  5 14:39 workernode_map.json
[2026-03-05 14:46:03] drwx------. 5 boinc boinc      4096 Mar  5 14:39 pilot3
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc       525 Mar  5 14:43 boinc_task_state.xml
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc       983 Mar  5 14:43 memory_monitor_summary.json
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc     23322 Mar  5 14:43 log.48955006._010786.job.log.tgz.1
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc      7024 Mar  5 14:45 heartbeat.json
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc      8192 Mar  5 14:45 boinc_mmap_file
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc        23 Mar  5 14:45 wrapper_checkpoint.txt
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc        95 Mar  5 14:46 pilot_heartbeat.json
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc       823 Mar  5 14:46 pilotlog.txt
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc    100677 Mar  5 14:46 log.48955006._010786.job.log.1
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc       188 Mar  5 14:46 output.list
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc       620 Mar  5 14:46 runtime_log
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc    143360 Mar  5 14:46 result.tar.gz
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc      8633 Mar  5 14:46 runtime_log.err
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc       643 Mar  5 14:46 cv6KDmDdTI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdiMLDmtLyPZm.diag
[2026-03-05 14:46:03] -rw-r--r--. 1 boinc boinc     21875 Mar  5 14:46 stderr.txt
[2026-03-05 14:46:03] No HITS result produced
[2026-03-05 14:46:03]  *** Contents of shared directory: ***
[2026-03-05 14:46:03] total 426376
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc 435843803 Mar  5 14:37 ATLAS.root_0
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc     15845 Mar  5 14:37 start_atlas.sh
[2026-03-05 14:46:03] -rw-r--r--. 2 boinc boinc    597956 Mar  5 14:37 input.tar.gz
[2026-03-05 14:46:03] -rw-------. 1 boinc boinc    143360 Mar  5 14:46 result.tar.gz
14:46:04 (3967238): run_atlas exited; CPU time 30.085038
14:46:04 (3967238): called boinc_finish(0)

</stderr_txt>
]]>

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