Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:54 (2976283): wrapper (7.7.26015): starting
18:18:54 (2976283): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:18:54] Arguments: --nthreads 4
[2026-03-09 18:18:54] Threads: 4
[2026-03-09 18:18:54] Checking for CVMFS
[2026-03-09 18:18:54] No cvmfs_config command found, will try listing directly
[2026-03-09 18:18:54] CVMFS is ok
[2026-03-09 18:18:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:18:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:18:54] Further information can be found at the LHC@home message board.
[2026-03-09 18:18:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:18:54] Checking for apptainer binary...
[2026-03-09 18:18:54] which: no apptainer in ((null))
[2026-03-09 18:18:54] apptainer is not installed, using version from CVMFS
[2026-03-09 18:18:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:18:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-09 18:18:55] apptainer works
[2026-03-09 18:18:55] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:18:55] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:18:55] Starting ATLAS job with PandaID=7038644931
[2026-03-09 18:18:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:43:22]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:43:22]  is_altstaged=None
[2026-03-09 19:43:22]  is_tar=False
[2026-03-09 19:43:22]  lfn=log.48955006._008219.job.log.tgz.1
[2026-03-09 19:43:22]  mtime=0
[2026-03-09 19:43:22]  protocol_id=None
[2026-03-09 19:43:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 19:43:22]  replicas=None
[2026-03-09 19:43:22]  scope=mc23_13p6TeV
[2026-03-09 19:43:22]  status=None
[2026-03-09 19:43:22]  status_code=0
[2026-03-09 19:43:22]  storage_token=
[2026-03-09 19:43:22]  surl=/var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/log.48955006._008219.job.log.tgz.1
[2026-03-09 19:43:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/8b/log.48955006._008219.job.log.tgz.1
[2026-03-09 19:43:22]  workdir=None
[2026-03-09 19:43:22] ]
[2026-03-09 19:43:22] 2026-03-09 18:42:43,539 | INFO     | transferring file log.48955006._008219.job.log.tgz.1 from /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/log.48955006._008219.job.log.tgz.1 to /var/lib/b
[2026-03-09 19:43:22] 2026-03-09 18:42:43,539 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/log.48955006._008219.job.log.tgz.1 /var/lib/boinc/var/slot16/slots/4/lo
[2026-03-09 19:43:22] 2026-03-09 18:42:43,554 | INFO     | adding to output.list: log.48955006._008219.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/8b/log.48955006._008219.job.log.tg
[2026-03-09 19:43:22] 2026-03-09 18:42:43,555 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 19:43:22] 2026-03-09 18:42:43,555 | INFO     | summary of transferred files:
[2026-03-09 19:43:22] 2026-03-09 18:42:43,555 | INFO     |  -- lfn=log.48955006._008219.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 19:43:22] 2026-03-09 18:42:43,555 | INFO     | stage-out finished correctly
[2026-03-09 19:43:22] 2026-03-09 18:42:43,566 | INFO     | time since job start (5015s) is within the limit (349056.0s)
[2026-03-09 19:43:22] 2026-03-09 18:42:45,196 | WARNING  | process 3006792 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 19:43:22] 2026-03-09 18:42:45,197 | INFO     | using path: /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:43:22] 2026-03-09 18:42:45,586 | INFO     | time since job start (5017s) is within the limit (349056.0s)
[2026-03-09 19:43:22] 2026-03-09 18:42:45,774 | INFO     | number of running child processes to parent process 3006792: 1
[2026-03-09 19:43:22] 2026-03-09 18:42:45,774 | INFO     | maximum number of monitored processes: 6
[2026-03-09 19:43:22] 2026-03-09 18:42:46,855 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 19:43:22] 2026-03-09 18:42:46,899 | INFO     | job 7038644931 has state=finished
[2026-03-09 19:43:22] 2026-03-09 18:42:46,900 | INFO     | preparing for final server update for job 7038644931 in state='finished'
[2026-03-09 19:43:22] 2026-03-09 18:42:46,900 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/jobReport.json
[2026-03-09 19:43:22] 2026-03-09 18:42:46,902 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/4/workernode_map.json
[2026-03-09 19:43:22] 2026-03-09 18:42:46,902 | INFO     | this job has now completed (state=finished)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,902 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:43:22] 2026-03-09 18:42:46,902 | INFO     | job 7038644931 has finished - writing final server update
[2026-03-09 19:43:22] 2026-03-09 18:42:46,903 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1898150/.job.ad'
[2026-03-09 19:43:22] 2026-03-09 18:42:46,903 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,921 | INFO     | using path: /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7038644931/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,922 | INFO     | extracted standard info from prmon json
[2026-03-09 19:43:22] 2026-03-09 18:42:46,922 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:43:22] 2026-03-09 18:42:46,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:43:22] 2026-03-09 18:42:46,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:43:22] 2026-03-09 18:42:46,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:43:22] 2026-03-09 18:42:46,923 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | sum of square deviations: 130793150.0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | sum of deviations: -490886398.0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | mean x: 1773079331.0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | mean y: 2339089.96
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | intersect: 6656972961.55679
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | chi2: 0.0002450659684450034
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | current memory leak: -3.75 B/s (using 75 data points, chi2=0.00)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | could have reported an average CPU frequency of 3545 MHz (6 samples)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | ..............................
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | . Timing measurements:
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | . get job = 0 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,924 | INFO     | . initial setup = 5 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | . payload setup = 5 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | . stage-in = 0 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | . payload execution = 4995 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | . stage-out = 0 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | . log creation = 0 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,925 | INFO     | ..............................
[2026-03-09 19:43:22] 2026-03-09 18:42:46,976 | INFO     | 
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | job summary report
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | --------------------------------------------------
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | PanDA job id: 7038644931
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | task id: 48955006
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | errors: (none)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | pilot state: finished 
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | transexitcode: 0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | exeerrorcode: 0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | exeerrordiag: 
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | exitcode: 0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | exitmsg: OK
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | cpuconsumptiontime: 18946 s
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | nevents: 400
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | neventsw: 0
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | pid: 3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | pgrp: 3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | corecount: 4
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | event service: False
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | sizes: {0: 2279973, 1: 2280235, 11: 2280263, 5004: 2315733, 5008: 2315927}
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | --------------------------------------------------
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | 
[2026-03-09 19:43:22] 2026-03-09 18:42:46,977 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/4
[2026-03-09 19:43:22] 2026-03-09 18:42:46,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:43:22] 2026-03-09 18:42:46,999 | INFO     | job 7038644931 has completed (purged errors)
[2026-03-09 19:43:22] 2026-03-09 18:42:46,999 | INFO     | overall cleanup function is called
[2026-03-09 19:43:22] 2026-03-09 18:42:48,006 | INFO     | --- collectZombieJob: --- 10, [3006792]
[2026-03-09 19:43:22] 2026-03-09 18:42:48,006 | INFO     | zombie collector waiting for pid 3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:48,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:43:22] 2026-03-09 18:42:48,007 | INFO     | collected zombie processes
[2026-03-09 19:43:22] 2026-03-09 18:42:48,007 | INFO     | will attempt to kill all subprocesses of pid=3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:48,519 | INFO     | process IDs to be killed: [3006792] (in reverse order)
[2026-03-09 19:43:22] 2026-03-09 18:42:48,756 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:43:22] 2026-03-09 18:42:48,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:43:22] 2026-03-09 18:42:48,795 | INFO     | did not find any defunct processes belonging to 3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:48,821 | INFO     | did not find any defunct processes belonging to 3006792
[2026-03-09 19:43:22] 2026-03-09 18:42:48,822 | INFO     | ready for new job
[2026-03-09 19:43:22] 2026-03-09 18:42:48,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:43:22] 2026-03-09 18:42:48,823 | INFO     | **************************************
[2026-03-09 19:43:22] 2026-03-09 18:42:48,823 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:43:22] 2026-03-09 18:42:48,823 | INFO     | **************************************
[2026-03-09 19:43:22] 2026-03-09 18:42:48,823 | INFO     | 
[2026-03-09 19:43:22] 2026-03-09 18:42:48,830 | INFO     | architecture information:
[2026-03-09 19:43:22] 2026-03-09 18:42:48,830 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:43:22] 2026-03-09 18:42:48,845 | INFO     | cat /etc/os-release:
[2026-03-09 19:43:22] NAME="CentOS Linux"
[2026-03-09 19:43:22] VERSION="7 (Core)"
[2026-03-09 19:43:22] ID="centos"
[2026-03-09 19:43:22] ID_LIKE="rhel fedora"
[2026-03-09 19:43:22] VERSION_ID="7"
[2026-03-09 19:43:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:43:22] ANSI_COLOR="0;31"
[2026-03-09 19:43:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:43:22] HOME_URL="https://www.centos.org/"
[2026-03-09 19:43:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:43:22] 
[2026-03-09 19:43:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:43:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:43:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:43:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:43:22] 
[2026-03-09 19:43:22] 2026-03-09 18:42:48,845 | INFO     | **************************************
[2026-03-09 19:43:22] 2026-03-09 18:42:49,347 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/4
[2026-03-09 19:43:22] 2026-03-09 18:42:49,364 | INFO     | sufficient remaining disk space (22722641920 B)
[2026-03-09 19:43:22] 2026-03-09 18:42:49,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:43:22] 2026-03-09 18:42:49,364 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:43:22] 2026-03-09 18:42:49,364 | INFO     | update_server=False
[2026-03-09 19:43:22] 2026-03-09 18:42:49,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:43:22] 2026-03-09 18:42:49,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:43:22] 2026-03-09 18:42:49,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:43:22] 2026-03-09 18:42:49,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:43:22] 2026-03-09 18:42:49,366 | INFO     | aborting loop
[2026-03-09 19:43:22] 2026-03-09 18:42:49,564 | INFO     | all payload control threads have been joined
[2026-03-09 19:43:22] 2026-03-09 18:42:50,188 | INFO     | all data control threads have been joined
[2026-03-09 19:43:22] 2026-03-09 18:42:50,369 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,371 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,407 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,553 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,569 | INFO     | [payload] control thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,579 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:50,750 | INFO     | all job control threads have been joined
[2026-03-09 19:43:22] 2026-03-09 18:42:51,193 | INFO     | [data] control thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,365 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,373 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,585 | INFO     | [job] validate thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,755 | INFO     | [job] control thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,916 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,921 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:51,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:43:22] 2026-03-09 18:42:52,991 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:53,371 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:42:59,833 | INFO     | job.realtimelogging is not enabled
[2026-03-09 19:43:22] 2026-03-09 18:43:00,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:43:22] 2026-03-09 18:43:16,058 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:43:22] 2026-03-09 18:43:17,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22546182313792)>', '<ExcThread(monitor, started 22545941407488)>']
[2026-03-09 19:43:22] 2026-03-09 18:43:19,256 | INFO     | PID=2987289 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 19:43:22] 2026-03-09 18:43:19,256 | INFO     | .. there are 59 such processes running
[2026-03-09 19:43:22] 2026-03-09 18:43:19,257 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:43:22] 2026-03-09 18:43:19,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:43:22] 2026-03-09 18:43:19,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:43:22] 2026-03-09 18:43:19,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:43:22] 2026-03-09 18:43:19,257 | INFO     | [monitor] control thread has ended
[2026-03-09 19:43:22] 2026-03-09 18:43:22,113 | INFO     | all workflow threads have been joined
[2026-03-09 19:43:22] 2026-03-09 18:43:22,113 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:43:22] 2026-03-09 18:43:22,114 | INFO     | traces error code: 0
[2026-03-09 19:43:22] 2026-03-09 18:43:22,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:43:22] 2026-03-09 18:43:22,334 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:43:22] 2026-03-09 18:43:22,336 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:43:22] 2026-03-09 18:43:22,341 [wrapper] pilotpid: 2987289
[2026-03-09 19:43:22] 2026-03-09 18:43:22,344 [wrapper] Pilot exit status: 0
[2026-03-09 19:43:22] 2026-03-09 18:43:22,356 [wrapper] pandaids: 7038644931
[2026-03-09 19:43:22] 2026-03-09 18:43:22,496 [wrapper] cleanup supervisor_pilot 3795171 2987290
[2026-03-09 19:43:22] 2026-03-09 18:43:22,502 [wrapper] Test setup, not cleaning
[2026-03-09 19:43:22] 2026-03-09 18:43:22,504 [wrapper] apfmon messages muted
[2026-03-09 19:43:22] 2026-03-09 18:43:22,512 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:43:22] 2026-03-09 18:43:22,515 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:43:22]  *** Error codes and diagnostics ***
[2026-03-09 19:43:22]     "exeErrorCode": 0,
[2026-03-09 19:43:22]     "exeErrorDiag": "",
[2026-03-09 19:43:22]     "pilotErrorCode": 0,
[2026-03-09 19:43:22]     "pilotErrorDiag": "",
[2026-03-09 19:43:22]  *** Listing of results directory ***
[2026-03-09 19:43:22] total 611825
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc      5111 Mar  5 16:50 queuedata.json
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc    584627 Mar  5 16:50 pilot3.tar.gz
[2026-03-09 19:43:22] -rwx------. 1 boinc boinc     36322 Mar  5 16:50 runpilot2-wrapper.sh
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:43:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:18 run_atlas
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:18 job.xml
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc 436056356 Mar  9 18:18 EVNT.46701403._000165.pool.root.1
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:18 start_atlas.sh
[2026-03-09 19:43:22] drwxrwx--x. 2 boinc boinc         5 Mar  9 18:18 shared
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc    597950 Mar  9 18:18 input.tar.gz
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc      6700 Mar  9 18:18 init_data.xml
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:18 boinc_lockfile
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc      2561 Mar  9 18:18 pandaJob.out
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc   1002716 Mar  9 18:19 agis_schedconf.cvmfs.json
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc   1511578 Mar  9 18:19 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc       444 Mar  9 18:19 workernode_map.json
[2026-03-09 19:43:22] drwx------. 5 boinc boinc        22 Mar  9 18:19 pilot3
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc       530 Mar  9 19:42 boinc_task_state.xml
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc 187890819 Mar  9 19:42 HITS.48955006._008219.pool.root.1
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc      1044 Mar  9 19:42 memory_monitor_summary.json
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc    280476 Mar  9 19:42 log.48955006._008219.job.log.tgz.1
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc      6383 Mar  9 19:42 heartbeat.json
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc        95 Mar  9 19:43 pilot_heartbeat.json
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:43 boinc_mmap_file
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc        27 Mar  9 19:43 wrapper_checkpoint.txt
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc      4901 Mar  9 19:43 pilotlog.txt
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc    729241 Mar  9 19:43 log.48955006._008219.job.log.1
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc       357 Mar  9 19:43 output.list
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:43 runtime_log
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc   1024000 Mar  9 19:43 result.tar.gz
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc      9204 Mar  9 19:43 runtime_log.err
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc       670 Mar  9 19:43 jiPKDmw8PI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUEOLDmsITBRn.diag
[2026-03-09 19:43:22] -rw-r--r--. 1 boinc boinc     21332 Mar  9 19:43 stderr.txt
[2026-03-09 19:43:22] HITS file was successfully produced:
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc 187890819 Mar  9 19:42 shared/HITS.pool.root.1
[2026-03-09 19:43:22]  *** Contents of shared directory: ***
[2026-03-09 19:43:22] total 610359
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc 436056356 Mar  9 18:18 ATLAS.root_0
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:18 start_atlas.sh
[2026-03-09 19:43:22] -rw-r--r--. 2 boinc boinc    597950 Mar  9 18:18 input.tar.gz
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc 187890819 Mar  9 19:42 HITS.pool.root.1
[2026-03-09 19:43:22] -rw-------. 1 boinc boinc   1024000 Mar  9 19:43 result.tar.gz
19:43:24 (2976283): run_atlas exited; CPU time 19190.469562
19:43:24 (2976283): called boinc_finish(0)

</stderr_txt>
]]>

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