Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:08 (3693386): wrapper (7.7.26015): starting
12:29:08 (3693386): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 12:29:08] Arguments: --nthreads 4
[2026-03-06 12:29:08] Threads: 4
[2026-03-06 12:29:08] Checking for CVMFS
[2026-03-06 12:29:08] No cvmfs_config command found, will try listing directly
[2026-03-06 12:29:08] CVMFS is ok
[2026-03-06 12:29:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 12:29:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 12:29:08] Further information can be found at the LHC@home message board.
[2026-03-06 12:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 12:29:08] Checking for apptainer binary...
[2026-03-06 12:29:08] which: no apptainer in ((null))
[2026-03-06 12:29:08] apptainer is not installed, using version from CVMFS
[2026-03-06 12:29:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 12:29:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-06 12:29:08] apptainer works
[2026-03-06 12:29:08] Set ATHENA_PROC_NUMBER=4
[2026-03-06 12:29:08] Set ATHENA_CORE_NUMBER=4
[2026-03-06 12:29:08] Starting ATLAS job with PandaID=7030281111
[2026-03-06 12:29:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 16:08:01]  *** The last 200 lines of the pilot log: ***
[2026-03-06 16:08:01] 2026-03-06 15:07:13,950 | INFO     | job 7030281111 has state=finished
[2026-03-06 16:08:01] 2026-03-06 15:07:13,950 | INFO     | preparing for final server update for job 7030281111 in state='finished'
[2026-03-06 16:08:01] 2026-03-06 15:07:13,951 | INFO     | reading metadata from: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7030281111/jobReport.json
[2026-03-06 16:08:01] 2026-03-06 15:07:13,954 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot40/slots/0/workernode_map.json
[2026-03-06 16:08:01] 2026-03-06 15:07:13,954 | INFO     | this job has now completed (state=finished)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,954 | INFO     | log transfer has been attempted: DONE
[2026-03-06 16:08:01] 2026-03-06 15:07:13,954 | INFO     | job 7030281111 has finished - writing final server update
[2026-03-06 16:08:01] 2026-03-06 15:07:13,955 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_49841/.job.ad'
[2026-03-06 16:08:01] 2026-03-06 15:07:13,955 | INFO     | total number of processed events: 400 (read)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,967 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7030281111/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,967 | INFO     | extracted standard info from prmon json
[2026-03-06 16:08:01] 2026-03-06 15:07:13,967 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 16:08:01] 2026-03-06 15:07:13,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 16:08:01] 2026-03-06 15:07:13,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 16:08:01] 2026-03-06 15:07:13,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 16:08:01] 2026-03-06 15:07:13,972 | INFO     | fitting pss+swap vs Time
[2026-03-06 16:08:01] 2026-03-06 15:07:13,972 | INFO     | sum of square deviations: 3038856977.5
[2026-03-06 16:08:01] 2026-03-06 15:07:13,974 | INFO     | sum of deviations: -25074724660.000004
[2026-03-06 16:08:01] 2026-03-06 15:07:13,974 | INFO     | mean x: 1772803090.5
[2026-03-06 16:08:01] 2026-03-06 15:07:13,974 | INFO     | mean y: 2382829.355140187
[2026-03-06 16:08:01] 2026-03-06 15:07:13,974 | INFO     | intersect: 14630432026.739445
[2026-03-06 16:08:01] 2026-03-06 15:07:13,974 | INFO     | chi2: 1.5849140851415384
[2026-03-06 16:08:01] 2026-03-06 15:07:13,975 | INFO     | sum of square deviations: 2830787960.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,976 | INFO     | sum of deviations: -24360394835.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,976 | INFO     | mean x: 1772802938.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,976 | INFO     | mean y: 2383352.980861244
[2026-03-06 16:08:01] 2026-03-06 15:07:13,976 | INFO     | intersect: 15258269750.88967
[2026-03-06 16:08:01] 2026-03-06 15:07:13,977 | INFO     | chi2: 1.5821995126927169
[2026-03-06 16:08:01] 2026-03-06 15:07:13,977 | INFO     | current chi2=1.5821995126927169 (change=0.17127568454785613 %)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,977 | INFO     | right removable region: 208
[2026-03-06 16:08:01] 2026-03-06 15:07:13,977 | INFO     | sum of square deviations: 2830787960.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,978 | INFO     | sum of deviations: -50072804406.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,979 | INFO     | mean x: 1772803243.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,979 | INFO     | mean y: 2400890.751196172
[2026-03-06 16:08:01] 2026-03-06 15:07:13,979 | INFO     | intersect: 31360888806.97841
[2026-03-06 16:08:01] 2026-03-06 15:07:13,979 | INFO     | chi2: 0.2857172804942528
[2026-03-06 16:08:01] 2026-03-06 15:07:13,979 | INFO     | current chi2=0.2857172804942528 (change=81.97269598567941 %)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,980 | INFO     | sum of square deviations: 2632440055.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,981 | INFO     | sum of deviations: -43598703331.500015
[2026-03-06 16:08:01] 2026-03-06 15:07:13,981 | INFO     | mean x: 1772803395.5
[2026-03-06 16:08:01] 2026-03-06 15:07:13,981 | INFO     | mean y: 2395895.0735294116
[2026-03-06 16:08:01] 2026-03-06 15:07:13,981 | INFO     | intersect: 29363721391.801846
[2026-03-06 16:08:01] 2026-03-06 15:07:13,981 | INFO     | chi2: 0.2753774622374787
[2026-03-06 16:08:01] 2026-03-06 15:07:13,982 | INFO     | current chi2=0.2753774622374787 (change=3.6188984575548226 %)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,982 | INFO     | left removable region: 20
[2026-03-06 16:08:01] 2026-03-06 15:07:13,982 | INFO     | sum of square deviations: 2060343747.0
[2026-03-06 16:08:01] 2026-03-06 15:07:13,983 | INFO     | sum of deviations: -25927088030.000004
[2026-03-06 16:08:01] 2026-03-06 15:07:13,983 | INFO     | mean x: 1772803517.5
[2026-03-06 16:08:01] 2026-03-06 15:07:13,983 | INFO     | mean y: 2382513.9680851065
[2026-03-06 16:08:01] 2026-03-06 15:07:13,983 | INFO     | intersect: 22311103049.093506
[2026-03-06 16:08:01] 2026-03-06 15:07:13,984 | INFO     | chi2: 0.21490165410917814
[2026-03-06 16:08:01] 2026-03-06 15:07:13,984 | INFO     | current memory leak: -12.58 B/s (using 188 data points, chi2=0.21)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,984 | INFO     | could have reported an average CPU frequency of 2538 MHz (11 samples)
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | ..............................
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . Timing measurements:
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . get job = 0 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . initial setup = 7 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . payload setup = 7 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . stage-in = 0 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . payload execution = 13039 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . stage-out = 1 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | . log creation = 0 s
[2026-03-06 16:08:01] 2026-03-06 15:07:13,985 | INFO     | ..............................
[2026-03-06 16:08:01] 2026-03-06 15:07:14,304 | INFO     | 
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | job summary report
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | --------------------------------------------------
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | PanDA job id: 7030281111
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | task id: 48838476
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | errors: (none)
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | pilot state: finished 
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | transexitcode: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | exeerrorcode: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | exeerrordiag: 
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | exitcode: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | exitmsg: OK
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | cpuconsumptiontime: 49678 s
[2026-03-06 16:08:01] 2026-03-06 15:07:14,305 | INFO     | nevents: 400
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | neventsw: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | pid: 3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | pgrp: 3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | corecount: 4
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | event service: False
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | sizes: {0: 2295412, 1: 2295873, 12: 2295873, 13049: 2326005, 13051: 2335025, 13054: 2335403}
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | --------------------------------------------------
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | 
[2026-03-06 16:08:01] 2026-03-06 15:07:14,306 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-06 16:08:01] 2026-03-06 15:07:14,330 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,332 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 16:08:01] 2026-03-06 15:07:14,333 | INFO     | job 7030281111 has completed (purged errors)
[2026-03-06 16:08:01] 2026-03-06 15:07:14,333 | INFO     | overall cleanup function is called
[2026-03-06 16:08:01] 2026-03-06 15:07:15,340 | INFO     | --- collectZombieJob: --- 10, [3702656]
[2026-03-06 16:08:01] 2026-03-06 15:07:15,341 | INFO     | zombie collector waiting for pid 3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:15,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 16:08:01] 2026-03-06 15:07:15,341 | INFO     | collected zombie processes
[2026-03-06 16:08:01] 2026-03-06 15:07:15,341 | INFO     | will attempt to kill all subprocesses of pid=3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:15,709 | INFO     | process IDs to be killed: [3702656] (in reverse order)
[2026-03-06 16:08:01] 2026-03-06 15:07:15,834 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 16:08:01] 2026-03-06 15:07:15,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 16:08:01] 2026-03-06 15:07:15,846 | INFO     | did not find any defunct processes belonging to 3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:15,858 | INFO     | did not find any defunct processes belonging to 3702656
[2026-03-06 16:08:01] 2026-03-06 15:07:15,858 | INFO     | ready for new job
[2026-03-06 16:08:01] 2026-03-06 15:07:15,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 16:08:01] 2026-03-06 15:07:15,860 | INFO     | **************************************
[2026-03-06 16:08:01] 2026-03-06 15:07:15,860 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 16:08:01] 2026-03-06 15:07:15,860 | INFO     | **************************************
[2026-03-06 16:08:01] 2026-03-06 15:07:15,861 | INFO     | 
[2026-03-06 16:08:01] 2026-03-06 15:07:15,864 | INFO     | architecture information:
[2026-03-06 16:08:01] 2026-03-06 15:07:15,864 | INFO     | executing command: cat /etc/os-release
[2026-03-06 16:08:01] 2026-03-06 15:07:15,881 | INFO     | cat /etc/os-release:
[2026-03-06 16:08:01] NAME="CentOS Linux"
[2026-03-06 16:08:01] VERSION="7 (Core)"
[2026-03-06 16:08:01] ID="centos"
[2026-03-06 16:08:01] ID_LIKE="rhel fedora"
[2026-03-06 16:08:01] VERSION_ID="7"
[2026-03-06 16:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 16:08:01] ANSI_COLOR="0;31"
[2026-03-06 16:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 16:08:01] HOME_URL="https://www.centos.org/"
[2026-03-06 16:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 16:08:01] 
[2026-03-06 16:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 16:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 16:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 16:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 16:08:01] 
[2026-03-06 16:08:01] 2026-03-06 15:07:15,881 | INFO     | **************************************
[2026-03-06 16:08:01] 2026-03-06 15:07:16,384 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-06 16:08:01] 2026-03-06 15:07:16,401 | INFO     | sufficient remaining disk space (29300359168 B)
[2026-03-06 16:08:01] 2026-03-06 15:07:16,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 16:08:01] 2026-03-06 15:07:16,401 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 16:08:01] 2026-03-06 15:07:16,401 | INFO     | update_server=False
[2026-03-06 16:08:01] 2026-03-06 15:07:16,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 16:08:01] 2026-03-06 15:07:16,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 16:08:01] 2026-03-06 15:07:16,402 | INFO     | aborting loop
[2026-03-06 16:08:01] 2026-03-06 15:07:16,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 16:08:01] 2026-03-06 15:07:16,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 16:08:01] 2026-03-06 15:07:16,459 | INFO     | all payload control threads have been joined
[2026-03-06 16:08:01] 2026-03-06 15:07:17,346 | INFO     | all data control threads have been joined
[2026-03-06 16:08:01] 2026-03-06 15:07:17,406 | INFO     | [job] retrieve thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,407 | INFO     | [job] job monitor thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,464 | INFO     | [payload] control thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,643 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,734 | INFO     | all job control threads have been joined
[2026-03-06 16:08:01] 2026-03-06 15:07:17,884 | INFO     | [payload] failed_post thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,911 | INFO     | [data] copytool_in thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:17,919 | INFO     | [job] validate thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,351 | INFO     | [data] control thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,376 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,407 | INFO     | [data] copytool_out thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,476 | INFO     | [payload] validate_post thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,739 | INFO     | [job] control thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:18,782 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:19,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 16:08:01] 2026-03-06 15:07:20,090 | INFO     | [job] queue monitor thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:20,407 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:26,631 | INFO     | job.realtimelogging is not enabled
[2026-03-06 16:08:01] 2026-03-06 15:07:27,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 16:08:01] 2026-03-06 15:07:46,098 | INFO     | PID=3697869 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 16:08:01] 2026-03-06 15:07:46,098 | INFO     | .. there are 12 such processes running
[2026-03-06 16:08:01] 2026-03-06 15:07:46,099 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 16:08:01] 2026-03-06 15:07:46,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 16:08:01] 2026-03-06 15:07:46,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 16:08:01] 2026-03-06 15:07:49,504 | INFO     | [monitor] cgroup control has ended
[2026-03-06 16:08:01] 2026-03-06 15:07:50,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22752212068160)>', '<ExcThread(monitor, started 22751971911424)>']
[2026-03-06 16:08:01] 2026-03-06 15:07:51,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 16:08:01] 2026-03-06 15:07:51,124 | INFO     | [monitor] control thread has ended
[2026-03-06 16:08:01] 2026-03-06 15:07:55,569 | INFO     | all workflow threads have been joined
[2026-03-06 16:08:01] 2026-03-06 15:07:55,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 16:08:01] 2026-03-06 15:07:55,570 | INFO     | traces error code: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:55,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 16:08:01] 2026-03-06 15:07:55,704 [wrapper] ==== pilot stdout END ====
[2026-03-06 16:08:01] 2026-03-06 15:07:55,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 16:08:01] 2026-03-06 15:07:55,710 [wrapper] pilotpid: 3697869
[2026-03-06 16:08:01] 2026-03-06 15:07:55,714 [wrapper] Pilot exit status: 0
[2026-03-06 16:08:01] 2026-03-06 15:07:55,728 [wrapper] pandaids: 7030281111
[2026-03-06 16:08:01] 2026-03-06 15:07:55,806 [wrapper] cleanup supervisor_pilot 3950740 3697870
[2026-03-06 16:08:01] 2026-03-06 15:07:55,810 [wrapper] Test setup, not cleaning
[2026-03-06 16:08:01] 2026-03-06 15:07:55,813 [wrapper] apfmon messages muted
[2026-03-06 16:08:01] 2026-03-06 15:07:55,815 [wrapper] ==== wrapper stdout END ====
[2026-03-06 16:08:01] 2026-03-06 15:07:55,818 [wrapper] ==== wrapper stderr END ====
[2026-03-06 16:08:01]  *** Error codes and diagnostics ***
[2026-03-06 16:08:01]     "exeErrorCode": 0,
[2026-03-06 16:08:01]     "exeErrorDiag": "",
[2026-03-06 16:08:01]     "pilotErrorCode": 0,
[2026-03-06 16:08:01]     "pilotErrorDiag": "",
[2026-03-06 16:08:01]  *** Listing of results directory ***
[2026-03-06 16:08:01] total 481892
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc      5111 Feb 25 16:36 queuedata.json
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc    584627 Feb 25 16:36 pilot3.tar.gz
[2026-03-06 16:08:01] -rwx------. 1 boinc boinc     36322 Feb 25 16:37 runpilot2-wrapper.sh
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc       100 Mar  6 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 16:08:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 12:29 run_atlas
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc       105 Mar  6 12:29 job.xml
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc 275915790 Mar  6 12:29 EVNT.48220149._000016.pool.root.1
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc      6558 Mar  6 12:29 init_data.xml
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc     15845 Mar  6 12:29 start_atlas.sh
[2026-03-06 16:08:01] drwxrwx--x. 2 boinc boinc      4096 Mar  6 12:29 shared
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc    597972 Mar  6 12:29 input.tar.gz
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc         0 Mar  6 12:29 boinc_lockfile
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc      2589 Mar  6 12:29 pandaJob.out
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc    998891 Mar  6 12:29 agis_schedconf.cvmfs.json
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc       443 Mar  6 12:29 workernode_map.json
[2026-03-06 16:08:01] drwx------. 5 boinc boinc      4096 Mar  6 12:29 pilot3
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc 209171791 Mar  6 16:06 HITS.48838476._000383.pool.root.1
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc       529 Mar  6 16:06 boinc_task_state.xml
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc      1033 Mar  6 16:07 memory_monitor_summary.json
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc   1521291 Mar  6 16:07 agis_ddmendpoints.agis.ALL.json
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc    380419 Mar  6 16:07 log.48838476._000383.job.log.tgz.1
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc      6390 Mar  6 16:07 heartbeat.json
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc        27 Mar  6 16:07 wrapper_checkpoint.txt
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc        95 Mar  6 16:07 pilot_heartbeat.json
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc      4901 Mar  6 16:07 pilotlog.txt
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc   1838844 Mar  6 16:07 log.48838476._000383.job.log.1
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc       357 Mar  6 16:07 output.list
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc       620 Mar  6 16:07 runtime_log
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc   2232320 Mar  6 16:07 result.tar.gz
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc       665 Mar  6 16:07 zvgLDms7VF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmokyKDmLtduSo.diag
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc      9205 Mar  6 16:07 runtime_log.err
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc      8192 Mar  6 16:08 boinc_mmap_file
[2026-03-06 16:08:01] -rw-r--r--. 1 boinc boinc     21092 Mar  6 16:08 stderr.txt
[2026-03-06 16:08:01] HITS file was successfully produced:
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc 209171791 Mar  6 16:06 shared/HITS.pool.root.1
[2026-03-06 16:08:01]  *** Contents of shared directory: ***
[2026-03-06 16:08:01] total 476512
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc 275915790 Mar  6 12:29 ATLAS.root_0
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc     15845 Mar  6 12:29 start_atlas.sh
[2026-03-06 16:08:01] -rw-r--r--. 2 boinc boinc    597972 Mar  6 12:29 input.tar.gz
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc 209171791 Mar  6 16:06 HITS.pool.root.1
[2026-03-06 16:08:01] -rw-------. 1 boinc boinc   2232320 Mar  6 16:07 result.tar.gz
16:08:03 (3693386): run_atlas exited; CPU time 50214.845293
16:08:03 (3693386): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN