Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:54:00 (2189539): wrapper (7.7.26015): starting
03:54:00 (2189539): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 03:54:00] Arguments: --nthreads 4
[2026-03-06 03:54:00] Threads: 4
[2026-03-06 03:54:00] Checking for CVMFS
[2026-03-06 03:54:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 03:54:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 03:54:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 03:54:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 03:54:00] 2.9.2.0 150552 12079 98140 156940 1 50 32130492 36864001 0 130560 0 5210933 99.984 449879 11902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-06 03:54:00] CVMFS is ok
[2026-03-06 03:54:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 03:54:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 03:54:00] Further information can be found at the LHC@home message board.
[2026-03-06 03:54:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 03:54:00] Checking for apptainer binary...
[2026-03-06 03:54:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 03:54:00] Running /usr/bin/apptainer --version
[2026-03-06 03:54:00] apptainer version 1.4.1-1.1
[2026-03-06 03:54:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 03:54:00] thA317
[2026-03-06 03:54:00] apptainer works
[2026-03-06 03:54:00] Set ATHENA_PROC_NUMBER=4
[2026-03-06 03:54:00] Set ATHENA_CORE_NUMBER=4
[2026-03-06 03:54:00] Starting ATLAS job with PandaID=7038625273
[2026-03-06 03:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 05:00:37]  *** The last 200 lines of the pilot log: ***
[2026-03-06 05:00:37] 2026-03-06 04:00:07,443 | INFO     | did not find any defunct processes belonging to 2198173
[2026-03-06 05:00:37] 2026-03-06 04:00:07,443 | INFO     | ready for new job
[2026-03-06 05:00:37] 2026-03-06 04:00:07,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 05:00:37] 2026-03-06 04:00:07,444 | INFO     | **************************************
[2026-03-06 05:00:37] 2026-03-06 04:00:07,444 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 05:00:37] 2026-03-06 04:00:07,444 | INFO     | **************************************
[2026-03-06 05:00:37] 2026-03-06 04:00:07,444 | INFO     | 
[2026-03-06 05:00:37] 2026-03-06 04:00:07,444 | INFO     | architecture information:
[2026-03-06 05:00:37] 2026-03-06 04:00:07,445 | INFO     | executing command: cat /etc/os-release
[2026-03-06 05:00:37] 2026-03-06 04:00:07,459 | INFO     | cat /etc/os-release:
[2026-03-06 05:00:37] NAME="CentOS Linux"
[2026-03-06 05:00:37] VERSION="7 (Core)"
[2026-03-06 05:00:37] ID="centos"
[2026-03-06 05:00:37] ID_LIKE="rhel fedora"
[2026-03-06 05:00:37] VERSION_ID="7"
[2026-03-06 05:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 05:00:37] ANSI_COLOR="0;31"
[2026-03-06 05:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 05:00:37] HOME_URL="https://www.centos.org/"
[2026-03-06 05:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 05:00:37] 
[2026-03-06 05:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 05:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 05:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 05:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 05:00:37] 
[2026-03-06 05:00:37] 2026-03-06 04:00:07,460 | INFO     | **************************************
[2026-03-06 05:00:37] 2026-03-06 04:00:07,963 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | INFO     | sufficient remaining disk space (225634680832 B)
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | INFO     | update_server=False
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:00:37] 2026-03-06 04:00:07,982 | INFO     | aborting loop
[2026-03-06 05:00:37] 2026-03-06 04:00:08,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 05:00:37] 2026-03-06 04:00:08,253 | INFO     | all data control threads have been joined
[2026-03-06 05:00:37] 2026-03-06 04:00:08,626 | INFO     | all payload control threads have been joined
[2026-03-06 05:00:37] 2026-03-06 04:00:08,988 | INFO     | [job] retrieve thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:08,988 | INFO     | [job] job monitor thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,018 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,095 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,249 | INFO     | [data] copytool_in thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,259 | INFO     | [data] control thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,339 | INFO     | [payload] validate_post thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,349 | INFO     | all job control threads have been joined
[2026-03-06 05:00:37] 2026-03-06 04:00:09,632 | INFO     | [payload] control thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:09,884 | INFO     | [payload] failed_post thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:10,122 | INFO     | [data] copytool_out thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:10,355 | INFO     | [job] control thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:10,401 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:10,441 | INFO     | [job] validate thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:10,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 05:00:37] 2026-03-06 04:00:11,956 | INFO     | [job] queue monitor thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:11,988 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:18,369 | INFO     | [monitor] cgroup control has ended
[2026-03-06 05:00:37] 2026-03-06 04:00:18,750 | INFO     | job.realtimelogging is not enabled
[2026-03-06 05:00:37] 2026-03-06 04:00:19,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 05:00:37] 2026-03-06 04:00:20,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502792779584)>', '<ExcThread(monitor, started 140501860738816)>']
[2026-03-06 05:00:37] 2026-03-06 04:00:25,637 | INFO     | all workflow threads have been joined
[2026-03-06 05:00:37] 2026-03-06 04:00:25,637 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 05:00:37] 2026-03-06 04:00:25,638 | INFO     | traces error code: 0
[2026-03-06 05:00:37] 2026-03-06 04:00:25,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | INFO     | PID=2193656 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 05:00:37] 2026-03-06 04:00:37,674 | INFO     | [monitor] control thread has ended
[2026-03-06 05:00:37] 2026-03-06 04:00:37,751 [wrapper] ==== pilot stdout END ====
[2026-03-06 05:00:37] 2026-03-06 04:00:37,756 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 05:00:37] 2026-03-06 04:00:37,760 [wrapper] pilotpid: 2193656
[2026-03-06 05:00:37] 2026-03-06 04:00:37,763 [wrapper] Pilot exit status: 0
[2026-03-06 05:00:37] 2026-03-06 04:00:37,775 [wrapper] pandaids: 7038625273
[2026-03-06 05:00:37] 2026-03-06 04:00:37,799 [wrapper] cleanup supervisor_pilot 2203693 2193657
[2026-03-06 05:00:37] 2026-03-06 04:00:37,804 [wrapper] Test setup, not cleaning
[2026-03-06 05:00:37] 2026-03-06 04:00:37,808 [wrapper] apfmon messages muted
[2026-03-06 05:00:37] 2026-03-06 04:00:37,811 [wrapper] ==== wrapper stdout END ====
[2026-03-06 05:00:37] 2026-03-06 04:00:37,815 [wrapper] ==== wrapper stderr END ====
[2026-03-06 05:00:37]  *** Error codes and diagnostics ***
[2026-03-06 05:00:37]     "exeErrorCode": 0,
[2026-03-06 05:00:37]     "exeErrorDiag": "",
[2026-03-06 05:00:37]     "pilotErrorCode": 0,
[2026-03-06 05:00:37]     "pilotErrorDiag": "",
[2026-03-06 05:00:37]  *** Listing of results directory ***
[2026-03-06 05:00:37] total 612672
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc    584627 Mar  5 12:39 pilot3.tar.gz
[2026-03-06 05:00:37] -rwx------ 1 boinc boinc     36322 Mar  5 12:40 runpilot2-wrapper.sh
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      5111 Mar  5 12:41 queuedata.json
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc       100 Mar  6 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 05:00:37] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 03:53 run_atlas
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc       105 Mar  6 03:53 job.xml
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc 441625966 Mar  6 03:54 EVNT.46701403._000129.pool.root.1
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc    597949 Mar  6 03:54 input.tar.gz
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc     15845 Mar  6 03:54 start_atlas.sh
[2026-03-06 05:00:37] drwxrwx--x 2 boinc boinc      4096 Mar  6 03:54 shared
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc         0 Mar  6 03:54 boinc_setup_complete
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      6376 Mar  6 03:54 init_data.xml
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc         0 Mar  6 03:54 boinc_lockfile
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      2561 Mar  6 03:54 pandaJob.out
[2026-03-06 05:00:37] -rw------- 1 boinc boinc    998552 Mar  6 03:54 agis_schedconf.cvmfs.json
[2026-03-06 05:00:37] -rw------- 1 boinc boinc   1521291 Mar  6 03:54 agis_ddmendpoints.agis.ALL.json
[2026-03-06 05:00:37] -rw------- 1 boinc boinc       427 Mar  6 03:54 workernode_map.json
[2026-03-06 05:00:37] drwx------ 5 boinc boinc      4096 Mar  6 03:54 pilot3
[2026-03-06 05:00:37] -rw------- 1 boinc boinc 180144653 Mar  6 04:59 HITS.48955006._006410.pool.root.1
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc       530 Mar  6 04:59 boinc_task_state.xml
[2026-03-06 05:00:37] -rw------- 1 boinc boinc      1023 Mar  6 04:59 memory_monitor_summary.json
[2026-03-06 05:00:37] -rw------- 1 boinc boinc    251303 Mar  6 05:00 log.48955006._006410.job.log.tgz.1
[2026-03-06 05:00:37] -rw------- 1 boinc boinc      6313 Mar  6 05:00 heartbeat.json
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc        27 Mar  6 05:00 wrapper_checkpoint.txt
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      8192 Mar  6 05:00 boinc_mmap_file
[2026-03-06 05:00:37] -rw------- 1 boinc boinc       747 Mar  6 05:00 pilotlog.txt
[2026-03-06 05:00:37] -rw------- 1 boinc boinc        95 Mar  6 05:00 pilot_heartbeat.json
[2026-03-06 05:00:37] -rw------- 1 boinc boinc    590301 Mar  6 05:00 log.48955006._006410.job.log.1
[2026-03-06 05:00:37] -rw------- 1 boinc boinc       357 Mar  6 05:00 output.list
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc       620 Mar  6 05:00 runtime_log
[2026-03-06 05:00:37] -rw------- 1 boinc boinc    860160 Mar  6 05:00 result.tar.gz
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      8896 Mar  6 05:00 runtime_log.err
[2026-03-06 05:00:37] -rw------- 1 boinc boinc       657 Mar  6 05:00 X98NDmaFMI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfkLLDm0gqgpm.diag
[2026-03-06 05:00:37] -rw-r--r-- 1 boinc boinc      9732 Mar  6 05:00 stderr.txt
[2026-03-06 05:00:37] HITS file was successfully produced:
[2026-03-06 05:00:37] -rw------- 1 boinc boinc 180144653 Mar  6 04:59 shared/HITS.pool.root.1
[2026-03-06 05:00:37]  *** Contents of shared directory: ***
[2026-03-06 05:00:37] total 608648
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc 441625966 Mar  6 03:54 ATLAS.root_0
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc    597949 Mar  6 03:54 input.tar.gz
[2026-03-06 05:00:37] -rw-r--r-- 2 boinc boinc     15845 Mar  6 03:54 start_atlas.sh
[2026-03-06 05:00:37] -rw------- 1 boinc boinc 180144653 Mar  6 04:59 HITS.pool.root.1
[2026-03-06 05:00:37] -rw------- 1 boinc boinc    860160 Mar  6 05:00 result.tar.gz
05:00:38 (2189539): run_atlas exited; CPU time 14761.780291
05:00:38 (2189539): called boinc_finish(0)

</stderr_txt>
]]>

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