Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:33 (4114903): wrapper (7.7.26015): starting
15:04:33 (4114903): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 15:04:33] Arguments: --nthreads 4
[2026-03-06 15:04:33] Threads: 4
[2026-03-06 15:04:33] Checking for CVMFS
[2026-03-06 15:04:33] No cvmfs_config command found, will try listing directly
[2026-03-06 15:04:33] CVMFS is ok
[2026-03-06 15:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 15:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 15:04:33] Further information can be found at the LHC@home message board.
[2026-03-06 15:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 15:04:33] Checking for apptainer binary...
[2026-03-06 15:04:33] which: no apptainer in ((null))
[2026-03-06 15:04:33] apptainer is not installed, using version from CVMFS
[2026-03-06 15:04:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 15:04:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-06 15:04:34] apptainer works
[2026-03-06 15:04:34] Set ATHENA_PROC_NUMBER=4
[2026-03-06 15:04:34] Set ATHENA_CORE_NUMBER=4
[2026-03-06 15:04:34] Starting ATLAS job with PandaID=7038636076
[2026-03-06 15:04:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 16:27:59]  *** The last 200 lines of the pilot log: ***
[2026-03-06 16:27:59]  guid=a6eafb22-da67-4446-865a-f09c28390d96
[2026-03-06 16:27:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-06 16:27:59]  is_altstaged=None
[2026-03-06 16:27:59]  is_tar=False
[2026-03-06 16:27:59]  lfn=log.48955006._007505.job.log.tgz.1
[2026-03-06 16:27:59]  mtime=0
[2026-03-06 16:27:59]  protocol_id=None
[2026-03-06 16:27:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 16:27:59]  replicas=None
[2026-03-06 16:27:59]  scope=mc23_13p6TeV
[2026-03-06 16:27:59]  status=None
[2026-03-06 16:27:59]  status_code=0
[2026-03-06 16:27:59]  storage_token=
[2026-03-06 16:27:59]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7038636076/log.48955006._007505.job.log.tgz.1
[2026-03-06 16:27:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/dc/log.48955006._007505.job.log.tgz.1
[2026-03-06 16:27:59]  workdir=None
[2026-03-06 16:27:59] ]
[2026-03-06 16:27:59] 2026-03-06 15:26:48,849 | INFO     | transferring file log.48955006._007505.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7038636076/log.48955006._007505.job.log.tgz.1 to /var/lib/
[2026-03-06 16:27:59] 2026-03-06 15:26:48,850 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7038636076/log.48955006._007505.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-06 16:27:59] 2026-03-06 15:26:48,866 | INFO     | adding to output.list: log.48955006._007505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/dc/log.48955006._007505.job.log.tg
[2026-03-06 16:27:59] 2026-03-06 15:26:48,866 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 16:27:59] 2026-03-06 15:26:48,866 | INFO     | summary of transferred files:
[2026-03-06 16:27:59] 2026-03-06 15:26:48,866 | INFO     |  -- lfn=log.48955006._007505.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 16:27:59] 2026-03-06 15:26:48,866 | INFO     | stage-out finished correctly
[2026-03-06 16:27:59] 2026-03-06 15:26:49,061 | INFO     | time since job start (4923s) is within the limit (349056.0s)
[2026-03-06 16:27:59] 2026-03-06 15:26:50,749 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 16:27:59] 2026-03-06 15:26:51,066 | INFO     | time since job start (4925s) is within the limit (349056.0s)
[2026-03-06 16:27:59] 2026-03-06 15:26:51,188 | INFO     | monitor loop #354: job 0:7038636076 is in state 'finished'
[2026-03-06 16:27:59] 2026-03-06 15:26:51,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,700 | INFO     | job 7038636076 has state=finished
[2026-03-06 16:27:59] 2026-03-06 15:26:52,700 | INFO     | preparing for final server update for job 7038636076 in state='finished'
[2026-03-06 16:27:59] 2026-03-06 15:26:52,700 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7038636076/jobReport.json
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | this job has now completed (state=finished)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | log transfer has been attempted: DONE
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | job 7038636076 has finished - writing final server update
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391162/.job.ad'
[2026-03-06 16:27:59] 2026-03-06 15:26:52,702 | INFO     | total number of processed events: 400 (read)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,721 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7038636076/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,721 | INFO     | extracted standard info from prmon json
[2026-03-06 16:27:59] 2026-03-06 15:26:52,721 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 16:27:59] 2026-03-06 15:26:52,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 16:27:59] 2026-03-06 15:26:52,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 16:27:59] 2026-03-06 15:26:52,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | fitting pss+swap vs Time
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | sum of square deviations: 125630262.5
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | sum of deviations: 474482308.5
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | mean x: 1772808438.5
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | mean y: 2331351.635135135
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | intersect: -6693238837.337131
[2026-03-06 16:27:59] 2026-03-06 15:26:52,723 | INFO     | chi2: 7.606611548698881e-05
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | current memory leak: 3.78 B/s (using 74 data points, chi2=0.00)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | could have reported an average CPU frequency of 3603 MHz (6 samples)
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | ..............................
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . Timing measurements:
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . get job = 0 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . initial setup = 4 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . payload setup = 5 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . stage-in = 0 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . payload execution = 4901 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . stage-out = 0 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | . log creation = 0 s
[2026-03-06 16:27:59] 2026-03-06 15:26:52,724 | INFO     | ..............................
[2026-03-06 16:27:59] 2026-03-06 15:26:53,071 | INFO     | time since job start (4927s) is within the limit (349056.0s)
[2026-03-06 16:27:59] 2026-03-06 15:26:53,183 | INFO     | 
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | job summary report
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | --------------------------------------------------
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | PanDA job id: 7038636076
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | task id: 48955006
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | errors: (none)
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | pilot state: finished 
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | transexitcode: 0
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | exeerrorcode: 0
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | exeerrordiag: 
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | exitcode: 0
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | exitmsg: OK
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | cpuconsumptiontime: 18671 s
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | nevents: 400
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | neventsw: 0
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | pid: 4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | pgrp: 4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | corecount: 4
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | event service: False
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | sizes: {0: 2295811, 11: 2295811, 4910: 2322234, 4912: 2331256, 4914: 2331312, 4915: 2331506}
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | --------------------------------------------------
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | 
[2026-03-06 16:27:59] 2026-03-06 15:26:53,184 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 16:27:59] 2026-03-06 15:26:53,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 16:27:59] 2026-03-06 15:26:53,205 | INFO     | job 7038636076 has completed (purged errors)
[2026-03-06 16:27:59] 2026-03-06 15:26:53,205 | INFO     | overall cleanup function is called
[2026-03-06 16:27:59] 2026-03-06 15:26:54,211 | INFO     | --- collectZombieJob: --- 10, [4128032]
[2026-03-06 16:27:59] 2026-03-06 15:26:54,212 | INFO     | zombie collector waiting for pid 4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:54,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 16:27:59] 2026-03-06 15:26:54,212 | INFO     | collected zombie processes
[2026-03-06 16:27:59] 2026-03-06 15:26:54,212 | INFO     | will attempt to kill all subprocesses of pid=4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:54,701 | INFO     | process IDs to be killed: [4128032] (in reverse order)
[2026-03-06 16:27:59] 2026-03-06 15:26:54,956 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 16:27:59] 2026-03-06 15:26:54,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 16:27:59] 2026-03-06 15:26:54,989 | INFO     | did not find any defunct processes belonging to 4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:55,021 | INFO     | did not find any defunct processes belonging to 4128032
[2026-03-06 16:27:59] 2026-03-06 15:26:55,021 | INFO     | ready for new job
[2026-03-06 16:27:59] 2026-03-06 15:26:55,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 16:27:59] 2026-03-06 15:26:55,023 | INFO     | **************************************
[2026-03-06 16:27:59] 2026-03-06 15:26:55,023 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 16:27:59] 2026-03-06 15:26:55,023 | INFO     | **************************************
[2026-03-06 16:27:59] 2026-03-06 15:26:55,023 | INFO     | 
[2026-03-06 16:27:59] 2026-03-06 15:26:55,029 | INFO     | architecture information:
[2026-03-06 16:27:59] 2026-03-06 15:26:55,030 | INFO     | executing command: cat /etc/os-release
[2026-03-06 16:27:59] 2026-03-06 15:26:55,044 | INFO     | cat /etc/os-release:
[2026-03-06 16:27:59] NAME="CentOS Linux"
[2026-03-06 16:27:59] VERSION="7 (Core)"
[2026-03-06 16:27:59] ID="centos"
[2026-03-06 16:27:59] ID_LIKE="rhel fedora"
[2026-03-06 16:27:59] VERSION_ID="7"
[2026-03-06 16:27:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 16:27:59] ANSI_COLOR="0;31"
[2026-03-06 16:27:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 16:27:59] HOME_URL="https://www.centos.org/"
[2026-03-06 16:27:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 16:27:59] 
[2026-03-06 16:27:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 16:27:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 16:27:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 16:27:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 16:27:59] 
[2026-03-06 16:27:59] 2026-03-06 15:26:55,044 | INFO     | **************************************
[2026-03-06 16:27:59] 2026-03-06 15:26:55,547 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | INFO     | sufficient remaining disk space (30066868224 B)
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | INFO     | update_server=False
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 16:27:59] 2026-03-06 15:26:55,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 16:27:59] 2026-03-06 15:26:55,572 | INFO     | aborting loop
[2026-03-06 16:27:59] 2026-03-06 15:26:55,888 | INFO     | all data control threads have been joined
[2026-03-06 16:27:59] 2026-03-06 15:26:56,576 | INFO     | [job] retrieve thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:56,577 | INFO     | [job] job monitor thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:56,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 16:27:59] 2026-03-06 15:26:56,870 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:56,893 | INFO     | [data] control thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:56,893 | INFO     | all payload control threads have been joined
[2026-03-06 16:27:59] 2026-03-06 15:26:56,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 16:27:59] 2026-03-06 15:26:56,990 | INFO     | all job control threads have been joined
[2026-03-06 16:27:59] 2026-03-06 15:26:57,049 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,069 | INFO     | [job] validate thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,143 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,218 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,236 | INFO     | [data] copytool_in thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,555 | INFO     | [payload] validate_post thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 16:27:59] 2026-03-06 15:26:57,894 | INFO     | [payload] failed_post thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,899 | INFO     | [payload] control thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:57,996 | INFO     | [job] control thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:58,791 | INFO     | [job] queue monitor thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:26:58,939 | INFO     | [data] copytool_out thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:27:00,811 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 16:27:59] 2026-03-06 15:27:26,748 | INFO     | PID=4119837 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 16:27:59] 2026-03-06 15:27:26,748 | INFO     | .. there are 46 such processes running
[2026-03-06 16:27:59] 2026-03-06 15:27:26,749 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 16:27:59] 2026-03-06 15:27:26,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 16:27:59] 2026-03-06 15:27:26,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 16:27:59] 2026-03-06 15:27:53,914 | INFO     | [monitor] cgroup control has ended
[2026-03-06 16:27:59] 2026-03-06 15:27:54,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23196133451584)>', '<ExcThread(monitor, started 23195888649984)>']
[2026-03-06 16:27:59] 2026-03-06 15:27:54,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 16:27:59] 2026-03-06 15:27:54,889 | INFO     | [monitor] control thread has ended
[2026-03-06 16:27:59] 2026-03-06 15:27:59,155 | INFO     | all workflow threads have been joined
[2026-03-06 16:27:59] 2026-03-06 15:27:59,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 16:27:59] 2026-03-06 15:27:59,155 | INFO     | traces error code: 0
[2026-03-06 16:27:59] 2026-03-06 15:27:59,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 16:27:59] 2026-03-06 15:27:59,316 [wrapper] ==== pilot stdout END ====
[2026-03-06 16:27:59] 2026-03-06 15:27:59,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 16:27:59] 2026-03-06 15:27:59,323 [wrapper] pilotpid: 4119837
[2026-03-06 16:27:59] 2026-03-06 15:27:59,325 [wrapper] Pilot exit status: 0
[2026-03-06 16:27:59] 2026-03-06 15:27:59,332 [wrapper] pandaids: 7038636076
[2026-03-06 16:27:59] 2026-03-06 15:27:59,479 [wrapper] cleanup supervisor_pilot  659827 4119838
[2026-03-06 16:27:59] 2026-03-06 15:27:59,485 [wrapper] Test setup, not cleaning
[2026-03-06 16:27:59] 2026-03-06 15:27:59,488 [wrapper] apfmon messages muted
[2026-03-06 16:27:59] 2026-03-06 15:27:59,490 [wrapper] ==== wrapper stdout END ====
[2026-03-06 16:27:59] 2026-03-06 15:27:59,493 [wrapper] ==== wrapper stderr END ====
[2026-03-06 16:27:59]  *** Error codes and diagnostics ***
[2026-03-06 16:27:59]     "exeErrorCode": 0,
[2026-03-06 16:27:59]     "exeErrorDiag": "",
[2026-03-06 16:27:59]     "pilotErrorCode": 0,
[2026-03-06 16:27:59]     "pilotErrorDiag": "",
[2026-03-06 16:27:59]  *** Listing of results directory ***
[2026-03-06 16:27:59] total 615712
[2026-03-06 16:27:59] -rwx------. 1 boinc boinc     36322 Mar  5 14:54 runpilot2-wrapper.sh
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc      5111 Mar  5 14:55 queuedata.json
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc    584627 Mar  5 14:56 pilot3.tar.gz
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc       100 Mar  6 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 16:27:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 15:04 run_atlas
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc       105 Mar  6 15:04 job.xml
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc      6708 Mar  6 15:04 init_data.xml
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc 437048343 Mar  6 15:04 EVNT.46701403._000151.pool.root.1
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:04 start_atlas.sh
[2026-03-06 16:27:59] drwxrwx--x. 2 boinc boinc      4096 Mar  6 15:04 shared
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc    597954 Mar  6 15:04 input.tar.gz
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc         0 Mar  6 15:04 boinc_lockfile
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc      2561 Mar  6 15:04 pandaJob.out
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc    998883 Mar  6 15:04 agis_schedconf.cvmfs.json
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc   1521291 Mar  6 15:04 agis_ddmendpoints.agis.ALL.json
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc       445 Mar  6 15:04 workernode_map.json
[2026-03-06 16:27:59] drwx------. 5 boinc boinc      4096 Mar  6 15:04 pilot3
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc 187544280 Mar  6 16:26 HITS.48955006._007505.pool.root.1
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc       530 Mar  6 16:26 boinc_task_state.xml
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc      1031 Mar  6 16:26 memory_monitor_summary.json
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc    260553 Mar  6 16:26 log.48955006._007505.job.log.tgz.1
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc      6353 Mar  6 16:26 heartbeat.json
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc        95 Mar  6 16:27 pilot_heartbeat.json
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc      4830 Mar  6 16:27 pilotlog.txt
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc        27 Mar  6 16:27 wrapper_checkpoint.txt
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc      8192 Mar  6 16:27 boinc_mmap_file
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc    720212 Mar  6 16:27 log.48955006._007505.job.log.1
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc       357 Mar  6 16:27 output.list
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc       620 Mar  6 16:27 runtime_log
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc    993280 Mar  6 16:27 result.tar.gz
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc      9221 Mar  6 16:27 runtime_log.err
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc       662 Mar  6 16:27 RlvNDmtKOI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmC3NLDmiGCwwm.diag
[2026-03-06 16:27:59] -rw-r--r--. 1 boinc boinc     21257 Mar  6 16:27 stderr.txt
[2026-03-06 16:27:59] HITS file was successfully produced:
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc 187544280 Mar  6 16:26 shared/HITS.pool.root.1
[2026-03-06 16:27:59]  *** Contents of shared directory: ***
[2026-03-06 16:27:59] total 611540
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc 437048343 Mar  6 15:04 ATLAS.root_0
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:04 start_atlas.sh
[2026-03-06 16:27:59] -rw-r--r--. 2 boinc boinc    597954 Mar  6 15:04 input.tar.gz
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc 187544280 Mar  6 16:26 HITS.pool.root.1
[2026-03-06 16:27:59] -rw-------. 1 boinc boinc    993280 Mar  6 16:27 result.tar.gz
16:28:01 (4114903): run_atlas exited; CPU time 18890.053383
16:28:01 (4114903): called boinc_finish(0)

</stderr_txt>
]]>

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