Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 14:03:49 (564267): vboxwrapper version 26210
2026-03-05 14:03:49 (564267): BOINC client version: 8.2.8
2026-03-05 14:03:49 (564267): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-03-05 14:03:49 (564267): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 14:03:49 (564267): Create VM. (boinc_5a25067dff341124, slot#6)
2026-03-05 14:03:50 (564267): Setting Memory Size for VM. (4100MB)
2026-03-05 14:03:50 (564267): Setting CPU Count for VM. (1)
2026-03-05 14:03:50 (564267): Setting Chipset Options for VM.
2026-03-05 14:03:50 (564267): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 14:03:50 (564267): Setting Boot Options for VM.
2026-03-05 14:03:50 (564267): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 14:03:50 (564267): Enabling VM Network Access.
2026-03-05 14:03:50 (564267): Disabling USB Support for VM.
2026-03-05 14:03:50 (564267): Disabling COM Port Support for VM.
2026-03-05 14:03:50 (564267): Disabling LPT Port Support for VM.
2026-03-05 14:03:50 (564267): Disabling Audio Support for VM.
2026-03-05 14:03:51 (564267): Disabling Clipboard Support for VM.
2026-03-05 14:03:51 (564267): Disabling Drag and Drop Support for VM.
2026-03-05 14:03:51 (564267): Adding storage controller(s) to VM.
2026-03-05 14:03:51 (564267): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 14:03:51 (564267): Adding VirtualBox Guest Additions to VM.
2026-03-05 14:03:51 (564267): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 14:03:51 (564267): forwarding host port 58487 to guest port 80
2026-03-05 14:03:51 (564267): Enabling remote desktop for VM.
2026-03-05 14:03:51 (564267): Enabling shared directory for VM.
2026-03-05 14:03:52 (564267): Starting VM using VBoxManage interface. (boinc_5a25067dff341124, slot#6)
2026-03-05 14:03:53 (564267): Successfully started VM. (PID = '564739')
2026-03-05 14:03:53 (564267): Reporting VM Process ID to BOINC.
2026-03-05 14:03:53 (564267): Guest Log: BIOS: VirtualBox 6.1.50
2026-03-05 14:03:53 (564267): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 14:03:53 (564267): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 14:03:53 (564267): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 14:03:53 (564267): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 14:03:53 (564267): Detected: Web Application Enabled (http://localhost:58487)
2026-03-05 14:03:53 (564267): Detected: Remote Desktop Enabled (localhost:50855)
2026-03-05 14:03:53 (564267): Preference change detected
2026-03-05 14:03:53 (564267): Setting CPU throttle for VM. (50%)
2026-03-05 14:03:53 (564267): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 14:03:55 (564267): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 14:03:55 (564267): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 14:03:59 (564267): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 14:03:59 (564267): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 14:03:59 (564267): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 14:04:08 (564267): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 14:04:08 (564267): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-05 14:04:34 (564267): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000280 main     Log opened 2026-03-05T20:04:31.307299000Z
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000435 main     OS Product: Linux
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000470 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000498 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000527 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000527 main     Process ID: 1255
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.000528 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 14:04:34 (564267): Guest Log: 00:00:00.002210 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 14:04:34 (564267): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 14:04:34 (564267): Guest Log: [INFO] Mounting shared directory
2026-03-05 14:04:34 (564267): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 14:05:33 (564267): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 14:05:33 (564267): Guest Log: [INFO] Detected branch: prod
2026-03-05 14:05:33 (564267): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 14:05:33 (564267): Guest Log: Copying input files
2026-03-05 14:05:44 (564267): Guest Log: Copied input files into RunAtlas.
2026-03-05 14:05:44 (564267): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 14:05:44 (564267): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 14:05:44 (564267): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 14:05:44 (564267): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 14:05:52 (564267): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 14:05:53 (564267): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 14:05:53 (564267): Guest Log: 2.6.3.0 1547 0 30072 156931 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 14:05:56 (564267): Guest Log: copied the webapp to /var/www
2026-03-05 14:05:56 (564267): Guest Log: core_number=1
2026-03-05 14:05:56 (564267): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 14:05:56 (564267): Guest Log:  *** Starting ATLAS job. (PandaID=7038636645 taskID=48955010) ***
2026-03-05 14:14:33 (564267): Guest Log:  *** Job finished ***
2026-03-05 14:14:33 (564267): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:09,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:09,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:25,150 | INFO     | [monitor] cgroup control has ended
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:25,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849727948608)>', '<ExcThread(monitor, started 139849277359872)>']
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:25,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:25,547 | INFO     | [monitor] control thread has ended
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,412 | INFO     | all workflow threads have been joined
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,413 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,413 | INFO     | traces error code: 0
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,595 [wrapper] ==== pilot stdout END ====
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,601 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,659 [wrapper] pilotpid: 5897
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,667 [wrapper] Pilot exit status: 0
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,735 [wrapper] pandaids: 7038636645
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,789 [wrapper] cleanup supervisor_pilot  5903 5898
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,795 [wrapper] Test setup, not cleaning
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,801 [wrapper] apfmon messages muted
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,806 [wrapper] ==== wrapper stdout END ====
2026-03-05 14:14:33 (564267): Guest Log: 2026-03-05 20:14:30,811 [wrapper] ==== wrapper stderr END ====
2026-03-05 14:14:33 (564267): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 14:14:33 (564267): Guest Log:     "exeErrorCode": 65,
2026-03-05 14:14:33 (564267): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
2026-03-05 14:14:33 (564267): Guest Log:     "pilotErrorCode": 1305,
2026-03-05 14:14:33 (564267): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
2026-03-05 14:14:33 (564267): Guest Log:  *** Listing of results directory ***
2026-03-05 14:14:33 (564267): Guest Log: total 4056
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Mar  5 14:54 pilot3.tar.gz
2026-03-05 14:14:33 (564267): Guest Log: -rwx------. 1 atlas atlas   36322 Mar  5 14:54 runpilot2-wrapper.sh
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar  5 14:56 queuedata.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas   15845 Mar  5 20:05 start_atlas.sh
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas    8690 Mar  5 20:05 init_data.xml
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas  597954 Mar  5 20:05 input.tar.gz
2026-03-05 14:14:33 (564267): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar  5 20:05 EVNT.46701403._001128.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas    2561 Mar  5 20:05 pandaJob.out
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas  998528 Mar  5 20:07 agis_schedconf.cvmfs.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas 1521291 Mar  5 20:07 agis_ddmendpoints.agis.ALL.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas     419 Mar  5 20:07 workernode_map.json
2026-03-05 14:14:33 (564267): Guest Log: drwx------. 5 atlas atlas    4096 Mar  5 20:07 pilot3
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas    1010 Mar  5 20:11 memory_monitor_summary.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas   38823 Mar  5 20:11 log.48955010._006399.job.log.tgz.1
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas      95 Mar  5 20:13 pilot_heartbeat.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas    7088 Mar  5 20:13 heartbeat.json
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas    4801 Mar  5 20:14 pilotlog.txt
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas  105890 Mar  5 20:14 log.48955010._006399.job.log.1
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas     188 Mar  5 20:14 output.list
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar  5 20:14 runtime_log
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas  163840 Mar  5 20:14 result.tar.gz
2026-03-05 14:14:33 (564267): Guest Log: -rw-r--r--. 1 atlas atlas    8468 Mar  5 20:14 runtime_log.err
2026-03-05 14:14:33 (564267): Guest Log: -rw-------. 1 atlas atlas     642 Mar  5 20:14 LUyKDmDHPI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmW9NLDmRSlTKo.diag
2026-03-05 14:14:33 (564267): Guest Log: Looking for outputfile HITS.48955010._006399.pool.root.1
2026-03-05 14:14:33 (564267): Guest Log: No HITS file was produced
2026-03-05 14:14:33 (564267): Guest Log: Successfully finished the ATLAS job!
2026-03-05 14:14:33 (564267): Guest Log: Copying the results back to the shared directory!
2026-03-05 14:14:33 (564267): Guest Log:  *** Contents of shared directory: ***
2026-03-05 14:14:34 (564267): Guest Log: total 434412
2026-03-05 14:14:34 (564267): Guest Log: -rw-r--r--. 1 root root 444043224 Mar  5 20:03 ATLAS.root_0
2026-03-05 14:14:34 (564267): Guest Log: -rw-r--r--. 1 root root      8690 Mar  5 20:03 init_data.xml
2026-03-05 14:14:34 (564267): Guest Log: -rw-r--r--. 1 root root    597954 Mar  5 20:03 input.tar.gz
2026-03-05 14:14:34 (564267): Guest Log: -rw-r--r--. 1 root root    163840 Mar  5  2026 result.tar.gz
2026-03-05 14:14:34 (564267): Guest Log: -rw-r--r--. 1 root root     15845 Mar  5 20:03 start_atlas.sh
2026-03-05 14:14:34 (564267): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 14:14:34 (564267): VM Completion File Detected.
2026-03-05 14:14:34 (564267): Powering off VM.
2026-03-05 14:14:34 (564267): Successfully stopped VM.
2026-03-05 14:14:34 (564267): Deregistering VM. (boinc_5a25067dff341124, slot#6)
2026-03-05 14:14:34 (564267): Removing network bandwidth throttle group from VM.
2026-03-05 14:14:34 (564267): Removing VM from VirtualBox.
2026-03-05 14:14:39 (564267): called boinc_finish(0)

</stderr_txt>
]]>

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