Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:10 (3340035): wrapper (7.7.26015): starting
10:42:10 (3340035): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 10:42:10] Arguments: --nthreads 8
[2026-03-05 10:42:10] Threads: 8
[2026-03-05 10:42:10] Checking for CVMFS
[2026-03-05 10:42:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 10:42:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 10:42:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 10:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 10:42:12] 2.11.3.0 278442 136231 222904 156929 0 230 41008442 45568001 11236 130560 0 804227952 99.801 473328556 23408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-05 10:42:12] CVMFS is ok
[2026-03-05 10:42:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 10:42:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 10:42:12] Further information can be found at the LHC@home message board.
[2026-03-05 10:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 10:42:12] Checking for apptainer binary...
[2026-03-05 10:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 10:42:12] Running /usr/bin/apptainer --version
[2026-03-05 10:42:12] apptainer version 1.4.1-1.el9
[2026-03-05 10:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 10:42:14] wns0021.triumf.lcg
[2026-03-05 10:42:14] apptainer works
[2026-03-05 10:42:14] Set ATHENA_PROC_NUMBER=8
[2026-03-05 10:42:14] Set ATHENA_CORE_NUMBER=8
[2026-03-05 10:42:14] Starting ATLAS job with PandaID=7038632198
[2026-03-05 10:42:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 10:50:59]  *** The last 200 lines of the pilot log: ***
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | wrong length of table data, x=[1772736393.0, 1772736454.0], y=[2017.0, 500002.0] (must be same and length>=4)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . Timing measurements:
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . get job = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . initial setup = 79 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload setup = 56 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-in = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload execution = 114 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-out = 2 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . log creation = 0 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632198/pilotlog.txt
[2026-03-05 10:50:59] 2026-03-05 18:50:05,771 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 10:50:59] - Log from pilotlog.txt -
[2026-03-05 10:50:59] 2026-03-05 18:50:05,375 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038632198/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | INFO     | extracted standard info from prmon json
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | wrong length of table data, x=[1772736393.0, 1772736454.0], y=[2017.0, 500002.0] (must be same and length>=4)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . Timing measurements:
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . get job = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . initial setup = 79 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload setup = 56 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-in = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload execution = 114 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-out = 2 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . log creation = 0 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632198/pilotlog.txt
[2026-03-05 10:50:59] 2026-03-05 18:50:05,772 | WARNING  | 
[2026-03-05 10:50:59] [begin log extracts]
[2026-03-05 10:50:59] - Log from pilotlog.txt -
[2026-03-05 10:50:59] 2026-03-05 18:50:05,375 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038632198/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | INFO     | extracted standard info from prmon json
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 10:50:59] 2026-03-05 18:50:05,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:50:59] 2026-03-05 18:50:05,389 | WARNING  | wrong length of table data, x=[1772736393.0, 1772736454.0], y=[2017.0, 500002.0] (must be same and length>=4)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . Timing measurements:
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . get job = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . initial setup = 79 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload setup = 56 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-in = 1 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . payload execution = 114 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . stage-out = 2 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | . log creation = 0 s
[2026-03-05 10:50:59] 2026-03-05 18:50:05,390 | INFO     | ..............................
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:50:59] 2026-03-05 18:50:05,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632198/pilotlog.txt
[2026-03-05 10:50:59] [end log extracts]
[2026-03-05 10:50:59] 2026-03-05 18:50:05,772 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 10:50:59] 2026-03-05 18:50:05,773 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 10:50:59] 2026-03-05 18:50:06,377 | INFO     | 
[2026-03-05 10:50:59] 2026-03-05 18:50:06,378 | INFO     | job summary report
[2026-03-05 10:50:59] 2026-03-05 18:50:06,378 | INFO     | --------------------------------------------------
[2026-03-05 10:50:59] 2026-03-05 18:50:06,378 | INFO     | PanDA job id: 7038632198
[2026-03-05 10:50:59] 2026-03-05 18:50:06,378 | INFO     | task id: 48955006
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 10:47:38,786 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | pilot state: failed 
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | transexitcode: 65
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | exeerrorcode: 65
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | exitcode: 65
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | cpuconsumptiontime: 15 s
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | nevents: 0
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | neventsw: 0
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | pid: 3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | pgrp: 3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:06,379 | INFO     | corecount: 8
[2026-03-05 10:50:59] 2026-03-05 18:50:06,380 | INFO     | event service: False
[2026-03-05 10:50:59] 2026-03-05 18:50:06,380 | INFO     | sizes: {0: 2294709, 1: 2295391, 2: 2295391, 3: 2295852, 14: 2295852, 176: 2319112, 178: 2319244, 181: 2323564, 183: 2323592, 300: 2323758}
[2026-03-05 10:50:59] 2026-03-05 18:50:06,380 | INFO     | --------------------------------------------------
[2026-03-05 10:50:59] 2026-03-05 18:50:06,380 | INFO     | 
[2026-03-05 10:50:59] 2026-03-05 18:50:06,380 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 10:50:59] 2026-03-05 18:50:06,732 | INFO     | time since job start (315s) is within the limit (349056.0s)
[2026-03-05 10:50:59] 2026-03-05 18:50:06,839 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | job 7038632198 has completed (purged errors)
[2026-03-05 10:50:59] 2026-03-05 18:50:06,841 | INFO     | overall cleanup function is called
[2026-03-05 10:50:59] 2026-03-05 18:50:07,849 | INFO     | --- collectZombieJob: --- 10, [3348738]
[2026-03-05 10:50:59] 2026-03-05 18:50:07,849 | INFO     | zombie collector waiting for pid 3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:07,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 10:50:59] 2026-03-05 18:50:07,850 | INFO     | collected zombie processes
[2026-03-05 10:50:59] 2026-03-05 18:50:07,850 | INFO     | will attempt to kill all subprocesses of pid=3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:11,132 | INFO     | PID=3343906 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 10:50:59] 2026-03-05 18:50:11,132 | INFO     | .. there are 19 such processes running
[2026-03-05 10:50:59] 2026-03-05 18:50:11,194 | INFO     | process IDs to be killed: [3348738] (in reverse order)
[2026-03-05 10:50:59] 2026-03-05 18:50:12,070 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 10:50:59] 2026-03-05 18:50:12,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 10:50:59] 2026-03-05 18:50:12,107 | INFO     | did not find any defunct processes belonging to 3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:12,153 | INFO     | did not find any defunct processes belonging to 3348738
[2026-03-05 10:50:59] 2026-03-05 18:50:12,154 | INFO     | ready for new job
[2026-03-05 10:50:59] 2026-03-05 18:50:12,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 10:50:59] 2026-03-05 18:50:12,155 | INFO     | **************************************
[2026-03-05 10:50:59] 2026-03-05 18:50:12,156 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 10:50:59] 2026-03-05 18:50:12,156 | INFO     | **************************************
[2026-03-05 10:50:59] 2026-03-05 18:50:12,156 | INFO     | 
[2026-03-05 10:50:59] 2026-03-05 18:50:12,169 | INFO     | architecture information:
[2026-03-05 10:50:59] 2026-03-05 18:50:12,196 | INFO     | executing command: cat /etc/os-release
[2026-03-05 10:50:59] 2026-03-05 18:50:12,349 | INFO     | cat /etc/os-release:
[2026-03-05 10:50:59] NAME="CentOS Linux"
[2026-03-05 10:50:59] VERSION="7 (Core)"
[2026-03-05 10:50:59] ID="centos"
[2026-03-05 10:50:59] ID_LIKE="rhel fedora"
[2026-03-05 10:50:59] VERSION_ID="7"
[2026-03-05 10:50:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 10:50:59] ANSI_COLOR="0;31"
[2026-03-05 10:50:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 10:50:59] HOME_URL="https://www.centos.org/"
[2026-03-05 10:50:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 10:50:59] 
[2026-03-05 10:50:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 10:50:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 10:50:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 10:50:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 10:50:59] 
[2026-03-05 10:50:59] 2026-03-05 18:50:12,350 | INFO     | **************************************
[2026-03-05 10:50:59] 2026-03-05 18:50:12,853 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 10:50:59] 2026-03-05 18:50:13,011 | INFO     | sufficient remaining disk space (1420683116544 B)
[2026-03-05 10:50:59] 2026-03-05 18:50:13,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 10:50:59] 2026-03-05 18:50:13,012 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 10:50:59] 2026-03-05 18:50:13,012 | INFO     | update_server=False
[2026-03-05 10:50:59] 2026-03-05 18:50:13,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 10:50:59] 2026-03-05 18:50:13,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 10:50:59] 2026-03-05 18:50:13,046 | INFO     | all payload control threads have been joined
[2026-03-05 10:50:59] 2026-03-05 18:50:13,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 10:50:59] 2026-03-05 18:50:13,240 | INFO     | all job control threads have been joined
[2026-03-05 10:50:59] 2026-03-05 18:50:13,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:50:59] 2026-03-05 18:50:13,359 | INFO     | aborting loop
[2026-03-05 10:50:59] 2026-03-05 18:50:13,553 | INFO     | all data control threads have been joined
[2026-03-05 10:50:59] 2026-03-05 18:50:14,018 | INFO     | [job] retrieve thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,052 | INFO     | [payload] control thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,158 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,246 | INFO     | [job] control thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,261 | INFO     | [job] validate thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,365 | INFO     | [job] job monitor thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,559 | INFO     | [data] control thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,951 | INFO     | [payload] failed_post thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:14,959 | INFO     | [payload] validate_post thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,167 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,232 | INFO     | [data] copytool_out thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,363 | INFO     | [data] copytool_in thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,364 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,377 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:15,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:50:59] 2026-03-05 18:50:16,424 | INFO     | [job] queue monitor thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:17,033 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 10:50:59] 2026-03-05 18:50:44,458 | INFO     | PID=3343906 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 10:50:59] 2026-03-05 18:50:44,458 | INFO     | .. there are 19 such processes running
[2026-03-05 10:50:59] 2026-03-05 18:50:44,458 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 10:50:59] 2026-03-05 18:50:44,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 10:50:59] 2026-03-05 18:50:44,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 10:50:59] 2026-03-05 18:50:50,632 | INFO     | [monitor] cgroup control has ended
[2026-03-05 10:50:59] 2026-03-05 18:50:52,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700333070144)>', '<ExcThread(monitor, started 139699557484288)>']
[2026-03-05 10:50:59] 2026-03-05 18:50:53,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 10:50:59] 2026-03-05 18:50:53,512 | INFO     | [monitor] control thread has ended
[2026-03-05 10:50:59] 2026-03-05 18:50:57,617 | INFO     | all workflow threads have been joined
[2026-03-05 10:50:59] 2026-03-05 18:50:57,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 10:50:59] 2026-03-05 18:50:57,617 | INFO     | traces error code: 0
[2026-03-05 10:50:59] 2026-03-05 18:50:57,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 10:50:59] 2026-03-05 18:50:58,221 [wrapper] ==== pilot stdout END ====
[2026-03-05 10:50:59] 2026-03-05 18:50:58,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 10:50:59] 2026-03-05 18:50:58,308 [wrapper] pilotpid: 3343906
[2026-03-05 10:50:59] 2026-03-05 18:50:58,363 [wrapper] Pilot exit status: 0
[2026-03-05 10:50:59] 2026-03-05 18:50:58,588 [wrapper] pandaids: 7038632198
[2026-03-05 10:50:59] 2026-03-05 18:50:58,908 [wrapper] cleanup supervisor_pilot 3343912 3343907
[2026-03-05 10:50:59] 2026-03-05 18:50:58,960 [wrapper] Test setup, not cleaning
[2026-03-05 10:50:59] 2026-03-05 18:50:59,004 [wrapper] apfmon messages muted
[2026-03-05 10:50:59] 2026-03-05 18:50:59,037 [wrapper] ==== wrapper stdout END ====
[2026-03-05 10:50:59] 2026-03-05 18:50:59,076 [wrapper] ==== wrapper stderr END ====
[2026-03-05 10:50:59]  *** Error codes and diagnostics ***
[2026-03-05 10:50:59]     "exeErrorCode": 65,
[2026-03-05 10:50:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 10:50:59]     "pilotErrorCode": 1305,
[2026-03-05 10:50:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 10:50:59]  *** Listing of results directory ***
[2026-03-05 10:50:59] total 433224
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc      5111 Mar  5 05:51 queuedata.json
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc    584627 Mar  5 05:51 pilot3.tar.gz
[2026-03-05 10:50:59] -rwx------. 1 boinc boinc     36322 Mar  5 05:51 runpilot2-wrapper.sh
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc       100 Mar  5 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 10:50:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 10:42 run_atlas
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc       105 Mar  5 10:42 job.xml
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc      6444 Mar  5 10:42 init_data.xml
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc 439443093 Mar  5 10:42 EVNT.46701403._000142.pool.root.1
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:42 start_atlas.sh
[2026-03-05 10:50:59] drwxrwx--x. 2 boinc boinc      4096 Mar  5 10:42 shared
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc    597952 Mar  5 10:42 input.tar.gz
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc         0 Mar  5 10:42 boinc_lockfile
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc      2561 Mar  5 10:42 pandaJob.out
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc   1521291 Mar  5 10:43 agis_ddmendpoints.agis.ALL.json
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc       437 Mar  5 10:44 workernode_map.json
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc    998478 Mar  5 10:44 agis_schedconf.cvmfs.json
[2026-03-05 10:50:59] drwx------. 5 boinc boinc      4096 Mar  5 10:44 pilot3
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc       983 Mar  5 10:47 memory_monitor_summary.json
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc     22841 Mar  5 10:48 log.48955006._007064.job.log.tgz.1
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc       525 Mar  5 10:48 boinc_task_state.xml
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc        95 Mar  5 10:50 pilot_heartbeat.json
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc      7006 Mar  5 10:50 heartbeat.json
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc      4819 Mar  5 10:50 pilotlog.txt
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc      8192 Mar  5 10:50 boinc_mmap_file
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc        23 Mar  5 10:50 wrapper_checkpoint.txt
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc     98305 Mar  5 10:50 log.48955006._007064.job.log.1
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc       188 Mar  5 10:50 output.list
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc       620 Mar  5 10:50 runtime_log
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc    143360 Mar  5 10:50 result.tar.gz
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc       642 Mar  5 10:50 tlBMDmqHOI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAxNLDmDmeZxn.diag
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc      8633 Mar  5 10:50 runtime_log.err
[2026-03-05 10:50:59] -rw-r--r--. 1 boinc boinc     22029 Mar  5 10:50 stderr.txt
[2026-03-05 10:50:59] No HITS result produced
[2026-03-05 10:50:59]  *** Contents of shared directory: ***
[2026-03-05 10:50:59] total 429888
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc 439443093 Mar  5 10:42 ATLAS.root_0
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:42 start_atlas.sh
[2026-03-05 10:50:59] -rw-r--r--. 2 boinc boinc    597952 Mar  5 10:42 input.tar.gz
[2026-03-05 10:50:59] -rw-------. 1 boinc boinc    143360 Mar  5 10:50 result.tar.gz
10:51:01 (3340035): run_atlas exited; CPU time 28.573164
10:51:01 (3340035): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN