Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:36:32 (709120): wrapper (7.7.26015): starting
10:36:32 (709120): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 10:36:32] Arguments: --nthreads 12
[2026-03-05 10:36:32] Threads: 12
[2026-03-05 10:36:32] Checking for CVMFS
[2026-03-05 10:36:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 10:36:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 10:36:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 10:36:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 10:36:35] 2.11.5.0 3810059 136105 272660 156929 1 197 44618608 45568001 16618 130560 0 863077983 99.810 507499682 18837 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-05 10:36:35] CVMFS is ok
[2026-03-05 10:36:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 10:36:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 10:36:35] Further information can be found at the LHC@home message board.
[2026-03-05 10:36:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 10:36:35] Checking for apptainer binary...
[2026-03-05 10:36:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 10:36:35] Running /usr/bin/apptainer --version
[2026-03-05 10:36:35] apptainer version 1.4.1-1.el9
[2026-03-05 10:36:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 10:36:36] wns0043.triumf.lcg
[2026-03-05 10:36:36] apptainer works
[2026-03-05 10:36:36] Set ATHENA_PROC_NUMBER=12
[2026-03-05 10:36:36] Set ATHENA_CORE_NUMBER=12
[2026-03-05 10:36:36] Starting ATLAS job with PandaID=7038632418
[2026-03-05 10:36:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 10:42:16]  *** The last 200 lines of the pilot log: ***
[2026-03-05 10:42:16] 2026-03-05 18:41:41,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | WARNING  | wrong length of table data, x=[1772735933.0], y=[1481.0] (must be same and length>=4)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | could have reported an average CPU frequency of 1452 MHz (4 samples)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . Timing measurements:
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . get job = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . initial setup = 28 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload setup = 18 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . stage-in = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload execution = 70 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . stage-out = 1 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . log creation = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632418/pilotlog.txt
[2026-03-05 10:42:16] 2026-03-05 18:41:41,454 | INFO     | monitor loop #59: job 0:7038632418 is in state 'failed'
[2026-03-05 10:42:16] 2026-03-05 18:41:41,455 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,620 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 10:42:16] - Log from pilotlog.txt -
[2026-03-05 10:42:16] 2026-03-05 18:41:41,330 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 10:42:16] 2026-03-05 18:41:41,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 10:42:16] 2026-03-05 18:41:41,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:42:16] 2026-03-05 18:41:41,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | WARNING  | wrong length of table data, x=[1772735933.0], y=[1481.0] (must be same and length>=4)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | could have reported an average CPU frequency of 1452 MHz (4 samples)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . Timing measurements:
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . get job = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . initial setup = 28 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload setup = 18 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . stage-in = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload execution = 70 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . stage-out = 1 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . log creation = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632418/pilotlog.txt
[2026-03-05 10:42:16] 2026-03-05 18:41:41,454 | INFO     | monitor loop #59: job 0:7038632418 is in state 'failed'
[2026-03-05 10:42:16] 2026-03-05 18:41:41,455 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,621 | WARNING  | 
[2026-03-05 10:42:16] [begin log extracts]
[2026-03-05 10:42:16] - Log from pilotlog.txt -
[2026-03-05 10:42:16] 2026-03-05 18:41:41,330 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 10:42:16] 2026-03-05 18:41:41,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 10:42:16] 2026-03-05 18:41:41,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:42:16] 2026-03-05 18:41:41,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | WARNING  | wrong length of table data, x=[1772735933.0], y=[1481.0] (must be same and length>=4)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | could have reported an average CPU frequency of 1452 MHz (4 samples)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . Timing measurements:
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . get job = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . initial setup = 28 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload setup = 18 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . stage-in = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,332 | INFO     | . payload execution = 70 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . stage-out = 1 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | . log creation = 0 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | ..............................
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 10:42:16] 2026-03-05 18:41:41,333 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038632418/pilotlog.txt
[2026-03-05 10:42:16] 2026-03-05 18:41:41,454 | INFO     | monitor loop #59: job 0:7038632418 is in state 'failed'
[2026-03-05 10:42:16] 2026-03-05 18:41:41,455 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-05 10:42:16] [end log extracts]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,621 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,622 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 10:42:16] 2026-03-05 18:41:41,936 | INFO     | 
[2026-03-05 10:42:16] 2026-03-05 18:41:41,936 | INFO     | job summary report
[2026-03-05 10:42:16] 2026-03-05 18:41:41,936 | INFO     | --------------------------------------------------
[2026-03-05 10:42:16] 2026-03-05 18:41:41,936 | INFO     | PanDA job id: 7038632418
[2026-03-05 10:42:16] 2026-03-05 18:41:41,936 | INFO     | task id: 48955010
[2026-03-05 10:42:16] 2026-03-05 18:41:41,937 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 10:39:26,279 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 10:42:16] 2026-03-05 18:41:41,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 10:42:16] 2026-03-05 18:41:41,937 | INFO     | pilot state: failed 
[2026-03-05 10:42:16] 2026-03-05 18:41:41,937 | INFO     | transexitcode: 65
[2026-03-05 10:42:16] 2026-03-05 18:41:41,951 | INFO     | exeerrorcode: 65
[2026-03-05 10:42:16] 2026-03-05 18:41:41,951 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,951 | INFO     | exitcode: 65
[2026-03-05 10:42:16] 2026-03-05 18:41:41,951 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | cpuconsumptiontime: 21 s
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | nevents: 0
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | neventsw: 0
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | pid: 717601
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | pgrp: 717601
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | corecount: 12
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | event service: False
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | sizes: {0: 2294660, 1: 2295258, 2: 2295370, 3: 2295831, 93: 2319019, 95: 2323311, 99: 2323467, 218: 2323633}
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | --------------------------------------------------
[2026-03-05 10:42:16] 2026-03-05 18:41:41,952 | INFO     | 
[2026-03-05 10:42:16] 2026-03-05 18:41:41,953 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 10:42:16] 2026-03-05 18:41:41,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 10:42:16] 2026-03-05 18:41:41,999 | INFO     | job 7038632418 has completed (purged errors)
[2026-03-05 10:42:16] 2026-03-05 18:41:41,999 | INFO     | overall cleanup function is called
[2026-03-05 10:42:16] 2026-03-05 18:41:43,015 | INFO     | --- collectZombieJob: --- 10, [717601]
[2026-03-05 10:42:16] 2026-03-05 18:41:43,015 | INFO     | zombie collector waiting for pid 717601
[2026-03-05 10:42:16] 2026-03-05 18:41:43,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 10:42:16] 2026-03-05 18:41:43,015 | INFO     | collected zombie processes
[2026-03-05 10:42:16] 2026-03-05 18:41:43,015 | INFO     | will attempt to kill all subprocesses of pid=717601
[2026-03-05 10:42:16] 2026-03-05 18:41:43,709 | INFO     | process IDs to be killed: [717601] (in reverse order)
[2026-03-05 10:42:16] 2026-03-05 18:41:44,011 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 10:42:16] 2026-03-05 18:41:44,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 10:42:16] 2026-03-05 18:41:44,055 | INFO     | did not find any defunct processes belonging to 717601
[2026-03-05 10:42:16] 2026-03-05 18:41:44,095 | INFO     | did not find any defunct processes belonging to 717601
[2026-03-05 10:42:16] 2026-03-05 18:41:44,095 | INFO     | ready for new job
[2026-03-05 10:42:16] 2026-03-05 18:41:44,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 10:42:16] 2026-03-05 18:41:44,098 | INFO     | **************************************
[2026-03-05 10:42:16] 2026-03-05 18:41:44,098 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 10:42:16] 2026-03-05 18:41:44,098 | INFO     | **************************************
[2026-03-05 10:42:16] 2026-03-05 18:41:44,098 | INFO     | 
[2026-03-05 10:42:16] 2026-03-05 18:41:44,144 | INFO     | architecture information:
[2026-03-05 10:42:16] 2026-03-05 18:41:44,183 | INFO     | executing command: cat /etc/os-release
[2026-03-05 10:42:16] 2026-03-05 18:41:44,381 | INFO     | cat /etc/os-release:
[2026-03-05 10:42:16] NAME="CentOS Linux"
[2026-03-05 10:42:16] VERSION="7 (Core)"
[2026-03-05 10:42:16] ID="centos"
[2026-03-05 10:42:16] ID_LIKE="rhel fedora"
[2026-03-05 10:42:16] VERSION_ID="7"
[2026-03-05 10:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 10:42:16] ANSI_COLOR="0;31"
[2026-03-05 10:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 10:42:16] HOME_URL="https://www.centos.org/"
[2026-03-05 10:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 10:42:16] 
[2026-03-05 10:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 10:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 10:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 10:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 10:42:16] 
[2026-03-05 10:42:16] 2026-03-05 18:41:44,381 | INFO     | **************************************
[2026-03-05 10:42:16] 2026-03-05 18:41:44,885 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 10:42:16] 2026-03-05 18:41:45,059 | INFO     | sufficient remaining disk space (2133977989120 B)
[2026-03-05 10:42:16] 2026-03-05 18:41:45,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 10:42:16] 2026-03-05 18:41:45,060 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 10:42:16] 2026-03-05 18:41:45,060 | INFO     | update_server=False
[2026-03-05 10:42:16] 2026-03-05 18:41:45,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 10:42:16] 2026-03-05 18:41:45,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:42:16] 2026-03-05 18:41:45,061 | INFO     | aborting loop
[2026-03-05 10:42:16] 2026-03-05 18:41:45,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 10:42:16] 2026-03-05 18:41:45,164 | INFO     | all payload control threads have been joined
[2026-03-05 10:42:16] 2026-03-05 18:41:45,958 | INFO     | all data control threads have been joined
[2026-03-05 10:42:16] 2026-03-05 18:41:46,066 | INFO     | [job] retrieve thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,067 | INFO     | [job] job monitor thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,169 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,170 | INFO     | [payload] control thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 10:42:16] 2026-03-05 18:41:46,690 | INFO     | all job control threads have been joined
[2026-03-05 10:42:16] 2026-03-05 18:41:46,861 | INFO     | [payload] failed_post thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:46,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:42:16] 2026-03-05 18:41:46,964 | INFO     | [data] control thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,084 | INFO     | [data] copytool_out thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,175 | INFO     | [job] validate thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,179 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,180 | INFO     | [data] copytool_in thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,358 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,439 | INFO     | [payload] validate_post thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,696 | INFO     | [job] control thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:47,963 | INFO     | [job] queue monitor thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:41:50,249 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 10:42:16] 2026-03-05 18:42:00,246 | INFO     | [monitor] cgroup control has ended
[2026-03-05 10:42:16] 2026-03-05 18:42:01,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182591481664)>', '<ExcThread(monitor, started 140181155870464)>']
[2026-03-05 10:42:16] 2026-03-05 18:42:06,434 | INFO     | all workflow threads have been joined
[2026-03-05 10:42:16] 2026-03-05 18:42:06,434 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 10:42:16] 2026-03-05 18:42:06,434 | INFO     | traces error code: 0
[2026-03-05 10:42:16] 2026-03-05 18:42:06,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | INFO     | PID=712973 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | INFO     | .. there are 28 such processes running
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 10:42:16] 2026-03-05 18:42:15,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 10:42:16] 2026-03-05 18:42:15,464 | INFO     | [monitor] control thread has ended
[2026-03-05 10:42:16] 2026-03-05 18:42:15,827 [wrapper] ==== pilot stdout END ====
[2026-03-05 10:42:16] 2026-03-05 18:42:15,830 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 10:42:16] 2026-03-05 18:42:15,838 [wrapper] pilotpid: 712973
[2026-03-05 10:42:16] 2026-03-05 18:42:15,848 [wrapper] Pilot exit status: 0
[2026-03-05 10:42:16] 2026-03-05 18:42:15,899 [wrapper] pandaids: 7038632418
[2026-03-05 10:42:16] 2026-03-05 18:42:16,161 [wrapper] cleanup supervisor_pilot  712979 712974
[2026-03-05 10:42:16] 2026-03-05 18:42:16,176 [wrapper] Test setup, not cleaning
[2026-03-05 10:42:16] 2026-03-05 18:42:16,194 [wrapper] apfmon messages muted
[2026-03-05 10:42:16] 2026-03-05 18:42:16,213 [wrapper] ==== wrapper stdout END ====
[2026-03-05 10:42:16] 2026-03-05 18:42:16,226 [wrapper] ==== wrapper stderr END ====
[2026-03-05 10:42:16]  *** Error codes and diagnostics ***
[2026-03-05 10:42:16]     "exeErrorCode": 65,
[2026-03-05 10:42:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 10:42:16]     "pilotErrorCode": 1305,
[2026-03-05 10:42:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 10:42:16]  *** Listing of results directory ***
[2026-03-05 10:42:16] total 436840
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc      5111 Mar  5 05:51 queuedata.json
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc    584627 Mar  5 05:51 pilot3.tar.gz
[2026-03-05 10:42:16] -rwx------. 1 boinc boinc     36322 Mar  5 05:51 runpilot2-wrapper.sh
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc       100 Mar  5 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 10:42:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 10:36 run_atlas
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc       105 Mar  5 10:36 job.xml
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc      6594 Mar  5 10:36 init_data.xml
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc 443180968 Mar  5 10:36 EVNT.46701403._001120.pool.root.1
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:36 start_atlas.sh
[2026-03-05 10:42:16] drwxrwx--x. 2 boinc boinc      4096 Mar  5 10:36 shared
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc    597962 Mar  5 10:36 input.tar.gz
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc         0 Mar  5 10:36 boinc_lockfile
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc      2561 Mar  5 10:36 pandaJob.out
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc    998478 Mar  5 10:37 agis_schedconf.cvmfs.json
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc   1521291 Mar  5 10:37 agis_ddmendpoints.agis.ALL.json
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc       444 Mar  5 10:37 workernode_map.json
[2026-03-05 10:42:16] drwx------. 5 boinc boinc      4096 Mar  5 10:38 pilot3
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc       525 Mar  5 10:39 boinc_task_state.xml
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc       956 Mar  5 10:39 memory_monitor_summary.json
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc     21722 Mar  5 10:39 log.48955010._005988.job.log.tgz.1
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc        95 Mar  5 10:41 pilot_heartbeat.json
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc      7021 Mar  5 10:41 heartbeat.json
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc        23 Mar  5 10:42 wrapper_checkpoint.txt
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc       822 Mar  5 10:42 pilotlog.txt
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc     87221 Mar  5 10:42 log.48955010._005988.job.log.1
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc       188 Mar  5 10:42 output.list
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc       620 Mar  5 10:42 runtime_log
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc    122880 Mar  5 10:42 result.tar.gz
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc      8635 Mar  5 10:42 runtime_log.err
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc       643 Mar  5 10:42 cnrNDm8HOI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLzNLDm1H5yom.diag
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc      8192 Mar  5 10:42 boinc_mmap_file
[2026-03-05 10:42:16] -rw-r--r--. 1 boinc boinc     21819 Mar  5 10:42 stderr.txt
[2026-03-05 10:42:16] No HITS result produced
[2026-03-05 10:42:16]  *** Contents of shared directory: ***
[2026-03-05 10:42:16] total 433520
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc 443180968 Mar  5 10:36 ATLAS.root_0
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:36 start_atlas.sh
[2026-03-05 10:42:16] -rw-r--r--. 2 boinc boinc    597962 Mar  5 10:36 input.tar.gz
[2026-03-05 10:42:16] -rw-------. 1 boinc boinc    122880 Mar  5 10:42 result.tar.gz
10:42:18 (709120): run_atlas exited; CPU time 32.991612
10:42:18 (709120): called boinc_finish(0)

</stderr_txt>
]]>

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