Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:30 (2889565): wrapper (7.7.26015): starting
21:00:30 (2889565): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 21:00:30] Arguments: --nthreads 4
[2026-03-05 21:00:30] Threads: 4
[2026-03-05 21:00:30] Checking for CVMFS
[2026-03-05 21:00:30] No cvmfs_config command found, will try listing directly
[2026-03-05 21:00:30] CVMFS is ok
[2026-03-05 21:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 21:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 21:00:30] Further information can be found at the LHC@home message board.
[2026-03-05 21:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 21:00:30] Checking for apptainer binary...
[2026-03-05 21:00:30] which: no apptainer in ((null))
[2026-03-05 21:00:30] apptainer is not installed, using version from CVMFS
[2026-03-05 21:00:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 21:00:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot136/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-05 21:00:30] apptainer works
[2026-03-05 21:00:30] Set ATHENA_PROC_NUMBER=4
[2026-03-05 21:00:30] Set ATHENA_CORE_NUMBER=4
[2026-03-05 21:00:30] Starting ATLAS job with PandaID=7040348984
[2026-03-05 21:00:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot136/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 22:38:56]  *** The last 200 lines of the pilot log: ***
[2026-03-05 22:38:56]  protocol_id=None
[2026-03-05 22:38:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 22:38:56]  replicas=None
[2026-03-05 22:38:56]  scope=mc23_13p6TeV
[2026-03-05 22:38:56]  status=None
[2026-03-05 22:38:56]  status_code=0
[2026-03-05 22:38:56]  storage_token=
[2026-03-05 22:38:56]  surl=/var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/log.48973281._000085.job.log.tgz.1
[2026-03-05 22:38:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/a0/log.48973281._000085.job.log.tgz.1
[2026-03-05 22:38:56]  workdir=None
[2026-03-05 22:38:56] ]
[2026-03-05 22:38:56] 2026-03-05 21:38:16,149 | INFO     | transferring file log.48973281._000085.job.log.tgz.1 from /var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/log.48973281._000085.job.log.tgz.1 to /var/lib/
[2026-03-05 22:38:56] 2026-03-05 21:38:16,149 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/log.48973281._000085.job.log.tgz.1 /var/lib/boinc/var/slot136/slots/0/
[2026-03-05 22:38:56] 2026-03-05 21:38:16,166 | INFO     | adding to output.list: log.48973281._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/a0/log.48973281._000085.job.log.tg
[2026-03-05 22:38:56] 2026-03-05 21:38:16,167 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 22:38:56] 2026-03-05 21:38:16,167 | INFO     | summary of transferred files:
[2026-03-05 22:38:56] 2026-03-05 21:38:16,167 | INFO     |  -- lfn=log.48973281._000085.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 22:38:56] 2026-03-05 21:38:16,167 | INFO     | stage-out finished correctly
[2026-03-05 22:38:56] 2026-03-05 21:38:17,218 | INFO     | time since job start (5858s) is within the limit (349056.0s)
[2026-03-05 22:38:56] 2026-03-05 21:38:18,961 | WARNING  | process 2900679 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 22:38:56] 2026-03-05 21:38:18,961 | INFO     | using path: /var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:38:56] 2026-03-05 21:38:19,224 | INFO     | time since job start (5860s) is within the limit (349056.0s)
[2026-03-05 22:38:56] 2026-03-05 21:38:19,471 | INFO     | number of running child processes to parent process 2900679: 1
[2026-03-05 22:38:56] 2026-03-05 21:38:19,471 | INFO     | maximum number of monitored processes: 6
[2026-03-05 22:38:56] 2026-03-05 21:38:19,655 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 22:38:56] 2026-03-05 21:38:21,229 | INFO     | time since job start (5862s) is within the limit (349056.0s)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,731 | INFO     | job 7040348984 has state=finished
[2026-03-05 22:38:56] 2026-03-05 21:38:21,732 | INFO     | preparing for final server update for job 7040348984 in state='finished'
[2026-03-05 22:38:56] 2026-03-05 21:38:21,732 | INFO     | reading metadata from: /var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/jobReport.json
[2026-03-05 22:38:56] 2026-03-05 21:38:21,733 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot136/slots/0/workernode_map.json
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | INFO     | this job has now completed (state=finished)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | INFO     | log transfer has been attempted: DONE
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | INFO     | job 7040348984 has finished - writing final server update
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_13381/.job.ad'
[2026-03-05 22:38:56] 2026-03-05 21:38:21,734 | INFO     | total number of processed events: 400 (read)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,752 | INFO     | using path: /var/lib/boinc/var/slot136/slots/0/PanDA_Pilot-7040348984/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,753 | INFO     | extracted standard info from prmon json
[2026-03-05 22:38:56] 2026-03-05 21:38:21,753 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 22:38:56] 2026-03-05 21:38:21,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 22:38:56] 2026-03-05 21:38:21,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 22:38:56] 2026-03-05 21:38:21,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 22:38:56] 2026-03-05 21:38:21,754 | INFO     | fitting pss+swap vs Time
[2026-03-05 22:38:56] 2026-03-05 21:38:21,754 | INFO     | sum of square deviations: 218571540.0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | sum of deviations: 816674039.0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | mean x: 1772743846.0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | mean y: 2336424.0786516853
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | intersect: -6621370746.695796
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | chi2: 0.0003138836272933541
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | current memory leak: 3.74 B/s (using 89 data points, chi2=0.00)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | could have reported an average CPU frequency of 3691 MHz (7 samples)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | ..............................
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . Timing measurements:
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . get job = 0 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . initial setup = 4 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . payload setup = 3 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . stage-in = 0 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,755 | INFO     | . payload execution = 5838 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,756 | INFO     | . stage-out = 0 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,756 | INFO     | . log creation = 0 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,756 | INFO     | ..............................
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | 
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | job summary report
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | --------------------------------------------------
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | PanDA job id: 7040348984
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | task id: 48973281
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | errors: (none)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | pilot state: finished 
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | transexitcode: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | exeerrorcode: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,804 | INFO     | exeerrordiag: 
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | exitcode: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | exitmsg: OK
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | cpuconsumptiontime: 21251 s
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | nevents: 400
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | neventsw: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | pid: 2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | pgrp: 2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | corecount: 4
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | event service: False
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | sizes: {0: 2295588, 1: 2295850, 11: 2295878, 5845: 2322810, 5846: 2331832, 5849: 2331888, 5852: 2332210}
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | --------------------------------------------------
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | 
[2026-03-05 22:38:56] 2026-03-05 21:38:21,805 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot136/slots/0
[2026-03-05 22:38:56] 2026-03-05 21:38:21,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | job 7040348984 has completed (purged errors)
[2026-03-05 22:38:56] 2026-03-05 21:38:21,833 | INFO     | overall cleanup function is called
[2026-03-05 22:38:56] 2026-03-05 21:38:22,842 | INFO     | --- collectZombieJob: --- 10, [2900679]
[2026-03-05 22:38:56] 2026-03-05 21:38:22,842 | INFO     | zombie collector waiting for pid 2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:22,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 22:38:56] 2026-03-05 21:38:22,843 | INFO     | collected zombie processes
[2026-03-05 22:38:56] 2026-03-05 21:38:22,843 | INFO     | will attempt to kill all subprocesses of pid=2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:22,920 | INFO     | PID=2894801 has CPU usage=16.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 22:38:56] 2026-03-05 21:38:22,920 | INFO     | .. there are 53 such processes running
[2026-03-05 22:38:56] 2026-03-05 21:38:23,426 | INFO     | process IDs to be killed: [2900679] (in reverse order)
[2026-03-05 22:38:56] 2026-03-05 21:38:23,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 22:38:56] 2026-03-05 21:38:23,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 22:38:56] 2026-03-05 21:38:23,715 | INFO     | did not find any defunct processes belonging to 2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:23,750 | INFO     | did not find any defunct processes belonging to 2900679
[2026-03-05 22:38:56] 2026-03-05 21:38:23,751 | INFO     | ready for new job
[2026-03-05 22:38:56] 2026-03-05 21:38:23,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 22:38:56] 2026-03-05 21:38:23,752 | INFO     | **************************************
[2026-03-05 22:38:56] 2026-03-05 21:38:23,752 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 22:38:56] 2026-03-05 21:38:23,752 | INFO     | **************************************
[2026-03-05 22:38:56] 2026-03-05 21:38:23,752 | INFO     | 
[2026-03-05 22:38:56] 2026-03-05 21:38:23,758 | INFO     | architecture information:
[2026-03-05 22:38:56] 2026-03-05 21:38:23,758 | INFO     | executing command: cat /etc/os-release
[2026-03-05 22:38:56] 2026-03-05 21:38:23,774 | INFO     | cat /etc/os-release:
[2026-03-05 22:38:56] NAME="CentOS Linux"
[2026-03-05 22:38:56] VERSION="7 (Core)"
[2026-03-05 22:38:56] ID="centos"
[2026-03-05 22:38:56] ID_LIKE="rhel fedora"
[2026-03-05 22:38:56] VERSION_ID="7"
[2026-03-05 22:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 22:38:56] ANSI_COLOR="0;31"
[2026-03-05 22:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 22:38:56] HOME_URL="https://www.centos.org/"
[2026-03-05 22:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 22:38:56] 
[2026-03-05 22:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 22:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 22:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 22:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 22:38:56] 
[2026-03-05 22:38:56] 2026-03-05 21:38:23,774 | INFO     | **************************************
[2026-03-05 22:38:56] 2026-03-05 21:38:24,277 | INFO     | executing command: df -mP /var/lib/boinc/var/slot136/slots/0
[2026-03-05 22:38:56] 2026-03-05 21:38:24,291 | INFO     | sufficient remaining disk space (326027444224 B)
[2026-03-05 22:38:56] 2026-03-05 21:38:24,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 22:38:56] 2026-03-05 21:38:24,292 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 22:38:56] 2026-03-05 21:38:24,292 | INFO     | update_server=False
[2026-03-05 22:38:56] 2026-03-05 21:38:24,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 22:38:56] 2026-03-05 21:38:24,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 22:38:56] 2026-03-05 21:38:24,347 | INFO     | all data control threads have been joined
[2026-03-05 22:38:56] 2026-03-05 21:38:24,481 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 22:38:56] 2026-03-05 21:38:24,481 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 22:38:56] 2026-03-05 21:38:24,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:38:56] 2026-03-05 21:38:24,482 | INFO     | will abort loop
[2026-03-05 22:38:56] 2026-03-05 21:38:24,941 | INFO     | all job control threads have been joined
[2026-03-05 22:38:56] 2026-03-05 21:38:25,249 | INFO     | all payload control threads have been joined
[2026-03-05 22:38:56] 2026-03-05 21:38:25,297 | INFO     | [job] retrieve thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,352 | INFO     | [data] control thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,421 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,487 | INFO     | [job] job monitor thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,545 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,549 | INFO     | [data] copytool_in thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,677 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 22:38:56] 2026-03-05 21:38:25,745 | INFO     | [payload] failed_post thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:25,946 | INFO     | [job] control thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:26,074 | INFO     | [payload] validate_post thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:26,254 | INFO     | [payload] control thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:26,297 | INFO     | [data] copytool_out thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:26,568 | INFO     | [job] validate thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:26,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:38:56] 2026-03-05 21:38:27,815 | INFO     | [job] queue monitor thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:29,718 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 22:38:56] 2026-03-05 21:38:48,676 | INFO     | [monitor] cgroup control has ended
[2026-03-05 22:38:56] 2026-03-05 21:38:48,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22731183556416)>', '<ExcThread(monitor, started 22730941667072)>']
[2026-03-05 22:38:56] 2026-03-05 21:38:53,714 | INFO     | all workflow threads have been joined
[2026-03-05 22:38:56] 2026-03-05 21:38:53,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 22:38:56] 2026-03-05 21:38:53,715 | INFO     | traces error code: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:53,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | INFO     | PID=2894801 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | INFO     | .. there are 53 such processes running
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 22:38:56] 2026-03-05 21:38:55,762 | INFO     | [monitor] control thread has ended
[2026-03-05 22:38:56] 2026-03-05 21:38:55,910 [wrapper] ==== pilot stdout END ====
[2026-03-05 22:38:56] 2026-03-05 21:38:55,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 22:38:56] 2026-03-05 21:38:55,915 [wrapper] pilotpid: 2894801
[2026-03-05 22:38:56] 2026-03-05 21:38:55,917 [wrapper] Pilot exit status: 0
[2026-03-05 22:38:56] 2026-03-05 21:38:55,938 [wrapper] pandaids: 7040348984
[2026-03-05 22:38:56] 2026-03-05 21:38:56,108 [wrapper] cleanup supervisor_pilot 4106792 2894802
[2026-03-05 22:38:56] 2026-03-05 21:38:56,144 [wrapper] Test setup, not cleaning
[2026-03-05 22:38:56] 2026-03-05 21:38:56,152 [wrapper] apfmon messages muted
[2026-03-05 22:38:56] 2026-03-05 21:38:56,169 [wrapper] ==== wrapper stdout END ====
[2026-03-05 22:38:56] 2026-03-05 21:38:56,183 [wrapper] ==== wrapper stderr END ====
[2026-03-05 22:38:56]  *** Error codes and diagnostics ***
[2026-03-05 22:38:56]     "exeErrorCode": 0,
[2026-03-05 22:38:56]     "exeErrorDiag": "",
[2026-03-05 22:38:56]     "pilotErrorCode": 0,
[2026-03-05 22:38:56]     "pilotErrorDiag": "",
[2026-03-05 22:38:56]  *** Listing of results directory ***
[2026-03-05 22:38:56] total 495677
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc    584627 Mar  4 17:22 pilot3.tar.gz
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc      5111 Mar  4 17:49 queuedata.json
[2026-03-05 22:38:56] -rwx------. 1 boinc boinc     36322 Mar  4 17:49 runpilot2-wrapper.sh
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc       100 Mar  5 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 22:38:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 21:00 run_atlas
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc       105 Mar  5 21:00 job.xml
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc      6701 Mar  5 21:00 init_data.xml
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc 293152050 Mar  5 21:00 EVNT.48716896._000004.pool.root.1
[2026-03-05 22:38:56] drwxrwx--x. 2 boinc boinc         5 Mar  5 21:00 shared
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc    597951 Mar  5 21:00 input.tar.gz
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc     15845 Mar  5 21:00 start_atlas.sh
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc         0 Mar  5 21:00 boinc_lockfile
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc      2592 Mar  5 21:00 pandaJob.out
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc    998528 Mar  5 21:00 agis_schedconf.cvmfs.json
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc   1521291 Mar  5 21:00 agis_ddmendpoints.agis.ALL.json
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc       443 Mar  5 21:00 workernode_map.json
[2026-03-05 22:38:56] drwx------. 5 boinc boinc        22 Mar  5 21:00 pilot3
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc 211899742 Mar  5 22:37 HITS.48973281._000085.pool.root.1
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc       529 Mar  5 22:37 boinc_task_state.xml
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc      1043 Mar  5 22:38 memory_monitor_summary.json
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc    281710 Mar  5 22:38 log.48973281._000085.job.log.tgz.1
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc        95 Mar  5 22:38 pilot_heartbeat.json
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc      6364 Mar  5 22:38 heartbeat.json
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc       823 Mar  5 22:38 pilotlog.txt
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc      8192 Mar  5 22:38 boinc_mmap_file
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc        27 Mar  5 22:38 wrapper_checkpoint.txt
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc    833860 Mar  5 22:38 log.48973281._000085.job.log.1
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc       357 Mar  5 22:38 output.list
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc       620 Mar  5 22:38 runtime_log
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc   1136640 Mar  5 22:38 result.tar.gz
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc      9221 Mar  5 22:38 runtime_log.err
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc       669 Mar  5 22:38 MzLLDm8a4H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmczKLDmw02NXm.diag
[2026-03-05 22:38:56] -rw-r--r--. 1 boinc boinc     21785 Mar  5 22:38 stderr.txt
[2026-03-05 22:38:56] HITS file was successfully produced:
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc 211899742 Mar  5 22:37 shared/HITS.pool.root.1
[2026-03-05 22:38:56]  *** Contents of shared directory: ***
[2026-03-05 22:38:56] total 494179
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc 293152050 Mar  5 21:00 ATLAS.root_0
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc    597951 Mar  5 21:00 input.tar.gz
[2026-03-05 22:38:56] -rw-r--r--. 2 boinc boinc     15845 Mar  5 21:00 start_atlas.sh
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc 211899742 Mar  5 22:37 HITS.pool.root.1
[2026-03-05 22:38:56] -rw-------. 1 boinc boinc   1136640 Mar  5 22:38 result.tar.gz
22:38:58 (2889565): run_atlas exited; CPU time 21565.716453
22:38:58 (2889565): called boinc_finish(0)

</stderr_txt>
]]>

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