Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:49 (14117): wrapper (7.7.26015): starting
12:15:49 (14117): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 12:15:49] Arguments: --nthreads 12
[2026-03-05 12:15:49] Threads: 12
[2026-03-05 12:15:49] Checking for CVMFS
[2026-03-05 12:15:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 12:15:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 12:15:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 12:15:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 12:15:49] 2.11.2.0 28623 423153 99140 156927 0 49 18016755 20275200 1 130560 4 183335071 99.951 23810533 17255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 12:15:49] CVMFS is ok
[2026-03-05 12:15:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 12:15:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 12:15:49] Further information can be found at the LHC@home message board.
[2026-03-05 12:15:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 12:15:49] Checking for apptainer binary...
[2026-03-05 12:15:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 12:15:49] Running /usr/bin/apptainer --version
[2026-03-05 12:15:49] apptainer version 1.3.2-1.el7
[2026-03-05 12:15:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 12:15:51] c-205-20.aglt2.org
[2026-03-05 12:15:51] apptainer works
[2026-03-05 12:15:51] Set ATHENA_PROC_NUMBER=12
[2026-03-05 12:15:51] Set ATHENA_CORE_NUMBER=12
[2026-03-05 12:15:51] Starting ATLAS job with PandaID=7038627194
[2026-03-05 12:15:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 13:21:24]  *** The last 200 lines of the pilot log: ***
[2026-03-05 13:21:24]  replicas=None
[2026-03-05 13:21:24]  scope=mc23_13p6TeV
[2026-03-05 13:21:24]  status=None
[2026-03-05 13:21:24]  status_code=0
[2026-03-05 13:21:24]  storage_token=
[2026-03-05 13:21:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038627194/log.48955006._006501.job.log.tgz.1
[2026-03-05 13:21:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/78/log.48955006._006501.job.log.tgz.1
[2026-03-05 13:21:24]  workdir=None
[2026-03-05 13:21:24] ]
[2026-03-05 13:21:24] 2026-03-05 18:20:33,864 | INFO     | transferring file log.48955006._006501.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038627194/log.48955006._006501.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 13:21:24] 2026-03-05 18:20:33,865 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038627194/log.48955006._006501.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._006501.job
[2026-03-05 13:21:24] 2026-03-05 18:20:33,885 | INFO     | adding to output.list: log.48955006._006501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/78/log.48955006._006501.job.log.tg
[2026-03-05 13:21:24] 2026-03-05 18:20:33,886 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 13:21:24] 2026-03-05 18:20:33,886 | INFO     | summary of transferred files:
[2026-03-05 13:21:24] 2026-03-05 18:20:33,887 | INFO     |  -- lfn=log.48955006._006501.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 13:21:24] 2026-03-05 18:20:33,887 | INFO     | stage-out finished correctly
[2026-03-05 13:21:24] 2026-03-05 18:20:34,680 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 13:21:24] 2026-03-05 18:20:35,268 | INFO     | time since job start (3863s) is within the limit (349056.0s)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,026 | INFO     | job 7038627194 has state=finished
[2026-03-05 13:21:24] 2026-03-05 18:20:37,026 | INFO     | preparing for final server update for job 7038627194 in state='finished'
[2026-03-05 13:21:24] 2026-03-05 18:20:37,027 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038627194/jobReport.json
[2026-03-05 13:21:24] 2026-03-05 18:20:37,029 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-05 13:21:24] 2026-03-05 18:20:37,030 | INFO     | this job has now completed (state=finished)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,030 | INFO     | log transfer has been attempted: DONE
[2026-03-05 13:21:24] 2026-03-05 18:20:37,030 | INFO     | job 7038627194 has finished - writing final server update
[2026-03-05 13:21:24] 2026-03-05 18:20:37,031 | INFO     | total number of processed events: 400 (read)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038627194/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,034 | INFO     | extracted standard info from prmon json
[2026-03-05 13:21:24] 2026-03-05 18:20:37,034 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 13:21:24] 2026-03-05 18:20:37,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 13:21:24] 2026-03-05 18:20:37,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 13:21:24] 2026-03-05 18:20:37,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 13:21:24] 2026-03-05 18:20:37,036 | INFO     | fitting pss+swap vs Time
[2026-03-05 13:21:24] 2026-03-05 18:20:37,036 | INFO     | sum of square deviations: 54438230.0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,037 | INFO     | sum of deviations: 82145040.0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,037 | INFO     | mean x: 1772732978.5
[2026-03-05 13:21:24] 2026-03-05 18:20:37,037 | INFO     | mean y: 2947193.714285714
[2026-03-05 13:21:24] 2026-03-05 18:20:37,037 | INFO     | intersect: -2672033631.8599777
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | chi2: 0.02025388350542349
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | current memory leak: 1.51 B/s (using 56 data points, chi2=0.02)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | ..............................
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | . Timing measurements:
[2026-03-05 13:21:24] 2026-03-05 18:20:37,038 | INFO     | . get job = 0 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . initial setup = 7 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . payload setup = 7 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . stage-in = 0 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . payload execution = 3838 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . stage-out = 0 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | . log creation = 0 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,039 | INFO     | ..............................
[2026-03-05 13:21:24] 2026-03-05 18:20:37,273 | INFO     | time since job start (3865s) is within the limit (349056.0s)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,584 | INFO     | 
[2026-03-05 13:21:24] 2026-03-05 18:20:37,585 | INFO     | job summary report
[2026-03-05 13:21:24] 2026-03-05 18:20:37,585 | INFO     | --------------------------------------------------
[2026-03-05 13:21:24] 2026-03-05 18:20:37,585 | INFO     | PanDA job id: 7038627194
[2026-03-05 13:21:24] 2026-03-05 18:20:37,585 | INFO     | task id: 48955006
[2026-03-05 13:21:24] 2026-03-05 18:20:37,585 | INFO     | errors: (none)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | pilot state: finished 
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | transexitcode: 0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | exeerrorcode: 0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | exeerrordiag: 
[2026-03-05 13:21:24] 2026-03-05 18:20:37,586 | INFO     | exitcode: 0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | exitmsg: OK
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | cpuconsumptiontime: 42215 s
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | nevents: 400
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | neventsw: 0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | pid: 22505
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | pgrp: 22505
[2026-03-05 13:21:24] 2026-03-05 18:20:37,587 | INFO     | corecount: 12
[2026-03-05 13:21:24] 2026-03-05 18:20:37,588 | INFO     | event service: False
[2026-03-05 13:21:24] 2026-03-05 18:20:37,588 | INFO     | sizes: {0: 2295360, 1: 2295821, 11: 2295821, 3850: 2321589, 3851: 2330587, 3852: 2330643, 3854: 2330965}
[2026-03-05 13:21:24] 2026-03-05 18:20:37,588 | INFO     | --------------------------------------------------
[2026-03-05 13:21:24] 2026-03-05 18:20:37,588 | INFO     | 
[2026-03-05 13:21:24] 2026-03-05 18:20:37,588 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 13:21:24] 2026-03-05 18:20:37,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 13:21:24] 2026-03-05 18:20:37,616 | INFO     | job 7038627194 has completed (purged errors)
[2026-03-05 13:21:24] 2026-03-05 18:20:37,617 | INFO     | overall cleanup function is called
[2026-03-05 13:21:24] 2026-03-05 18:20:38,605 | WARNING  | process 22505 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 13:21:24] 2026-03-05 18:20:38,625 | INFO     | --- collectZombieJob: --- 10, [22505]
[2026-03-05 13:21:24] 2026-03-05 18:20:38,625 | INFO     | zombie collector waiting for pid 22505
[2026-03-05 13:21:24] 2026-03-05 18:20:38,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 13:21:24] 2026-03-05 18:20:38,625 | INFO     | collected zombie processes
[2026-03-05 13:21:24] 2026-03-05 18:20:38,626 | INFO     | will attempt to kill all subprocesses of pid=22505
[2026-03-05 13:21:24] 2026-03-05 18:20:38,759 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 13:21:24] 2026-03-05 18:20:38,761 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 13:21:24] 2026-03-05 18:20:38,761 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-05 13:21:24] 2026-03-05 18:20:38,761 | WARNING  | maxPSS not found in memory monitor output
[2026-03-05 13:21:24] 2026-03-05 18:20:38,762 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7038627194/payload.stdout) since it has not been created yet
[2026-03-05 13:21:24] 2026-03-05 18:20:38,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 13:21:24] 2026-03-05 18:20:38,778 | INFO     | sufficient remaining disk space (28905046016 B)
[2026-03-05 13:21:24] 2026-03-05 18:20:38,779 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-05 13:21:24] 2026-03-05 18:20:38,779 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7038627194/HITS.48955006._006501.pool.root.1 since it does not exist
[2026-03-05 13:21:24] 2026-03-05 18:20:38,837 | INFO     | process IDs to be killed: [22505] (in reverse order)
[2026-03-05 13:21:24] 2026-03-05 18:20:38,883 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 13:21:24] 2026-03-05 18:20:38,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 13:21:24] 2026-03-05 18:20:38,891 | INFO     | did not find any defunct processes belonging to 22505
[2026-03-05 13:21:24] 2026-03-05 18:20:38,898 | INFO     | did not find any defunct processes belonging to 22505
[2026-03-05 13:21:24] 2026-03-05 18:20:38,899 | INFO     | ready for new job
[2026-03-05 13:21:24] 2026-03-05 18:20:38,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 13:21:24] 2026-03-05 18:20:38,900 | INFO     | **************************************
[2026-03-05 13:21:24] 2026-03-05 18:20:38,900 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 13:21:24] 2026-03-05 18:20:38,901 | INFO     | **************************************
[2026-03-05 13:21:24] 2026-03-05 18:20:38,901 | INFO     | 
[2026-03-05 13:21:24] 2026-03-05 18:20:38,901 | INFO     | architecture information:
[2026-03-05 13:21:24] 2026-03-05 18:20:38,902 | INFO     | executing command: cat /etc/os-release
[2026-03-05 13:21:24] 2026-03-05 18:20:38,917 | INFO     | cat /etc/os-release:
[2026-03-05 13:21:24] NAME="CentOS Linux"
[2026-03-05 13:21:24] VERSION="7 (Core)"
[2026-03-05 13:21:24] ID="centos"
[2026-03-05 13:21:24] ID_LIKE="rhel fedora"
[2026-03-05 13:21:24] VERSION_ID="7"
[2026-03-05 13:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 13:21:24] ANSI_COLOR="0;31"
[2026-03-05 13:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 13:21:24] HOME_URL="https://www.centos.org/"
[2026-03-05 13:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 13:21:24] 
[2026-03-05 13:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 13:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 13:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 13:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 13:21:24] 
[2026-03-05 13:21:24] 2026-03-05 18:20:38,918 | INFO     | **************************************
[2026-03-05 13:21:24] 2026-03-05 18:20:38,926 | INFO     | number of running child processes to parent process 22505: 1
[2026-03-05 13:21:24] 2026-03-05 18:20:38,926 | INFO     | maximum number of monitored processes: 6
[2026-03-05 13:21:24] 2026-03-05 18:20:38,926 | INFO     | aborting job monitoring since job object (job id=7038627194) has expired
[2026-03-05 13:21:24] 2026-03-05 18:20:39,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 13:21:24] 2026-03-05 18:20:39,436 | INFO     | sufficient remaining disk space (28905046016 B)
[2026-03-05 13:21:24] 2026-03-05 18:20:39,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 13:21:24] 2026-03-05 18:20:39,437 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 13:21:24] 2026-03-05 18:20:39,437 | INFO     | update_server=False
[2026-03-05 13:21:24] 2026-03-05 18:20:39,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 13:21:24] 2026-03-05 18:20:39,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 13:21:24] 2026-03-05 18:20:39,438 | INFO     | will abort loop
[2026-03-05 13:21:24] 2026-03-05 18:20:39,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 13:21:24] 2026-03-05 18:20:39,650 | INFO     | all data control threads have been joined
[2026-03-05 13:21:24] 2026-03-05 18:20:40,279 | INFO     | all payload control threads have been joined
[2026-03-05 13:21:24] 2026-03-05 18:20:40,443 | INFO     | [job] retrieve thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:40,443 | INFO     | [job] job monitor thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:40,454 | INFO     | [payload] validate_post thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:40,619 | INFO     | [data] copytool_in thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:40,655 | INFO     | [data] control thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:40,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 13:21:24] 2026-03-05 18:20:40,864 | INFO     | all job control threads have been joined
[2026-03-05 13:21:24] 2026-03-05 18:20:41,284 | INFO     | [payload] control thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,417 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,463 | INFO     | [job] validate thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,480 | INFO     | [data] copytool_out thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,482 | INFO     | [payload] failed_post thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,646 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,869 | INFO     | [job] control thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:41,932 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:42,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 13:21:24] 2026-03-05 18:20:43,130 | INFO     | [job] queue monitor thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:20:44,772 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 13:21:24] 2026-03-05 18:21:10,473 | INFO     | PID=18130 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 13:21:24] 2026-03-05 18:21:10,474 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 13:21:24] 2026-03-05 18:21:10,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 13:21:24] 2026-03-05 18:21:10,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 13:21:24] 2026-03-05 18:21:17,615 | INFO     | [monitor] cgroup control has ended
[2026-03-05 13:21:24] 2026-03-05 18:21:18,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038627100480)>', '<ExcThread(monitor, started 140037610010368)>']
[2026-03-05 13:21:24] 2026-03-05 18:21:19,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 13:21:24] 2026-03-05 18:21:19,516 | INFO     | [monitor] control thread has ended
[2026-03-05 13:21:24] 2026-03-05 18:21:23,791 | INFO     | all workflow threads have been joined
[2026-03-05 13:21:24] 2026-03-05 18:21:23,791 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 13:21:24] 2026-03-05 18:21:23,791 | INFO     | traces error code: 0
[2026-03-05 13:21:24] 2026-03-05 18:21:23,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 13:21:24] 2026-03-05 18:21:23,885 [wrapper] ==== pilot stdout END ====
[2026-03-05 13:21:24] 2026-03-05 18:21:23,889 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 13:21:24] 2026-03-05 18:21:23,892 [wrapper] pilotpid: 18130
[2026-03-05 13:21:24] 2026-03-05 18:21:23,896 [wrapper] Pilot exit status: 0
[2026-03-05 13:21:24] 2026-03-05 18:21:23,912 [wrapper] pandaids: 7038627194
[2026-03-05 13:21:24] 2026-03-05 18:21:23,950 [wrapper] cleanup supervisor_pilot  8561 18131
[2026-03-05 13:21:24] 2026-03-05 18:21:23,954 [wrapper] Test setup, not cleaning
[2026-03-05 13:21:24] 2026-03-05 18:21:23,958 [wrapper] apfmon messages muted
[2026-03-05 13:21:24] 2026-03-05 18:21:23,962 [wrapper] ==== wrapper stdout END ====
[2026-03-05 13:21:24] 2026-03-05 18:21:23,965 [wrapper] ==== wrapper stderr END ====
[2026-03-05 13:21:24]  *** Error codes and diagnostics ***
[2026-03-05 13:21:24]     "exeErrorCode": 0,
[2026-03-05 13:21:24]     "exeErrorDiag": "",
[2026-03-05 13:21:24]     "pilotErrorCode": 0,
[2026-03-05 13:21:24]     "pilotErrorDiag": "",
[2026-03-05 13:21:24]  *** Listing of results directory ***
[2026-03-05 13:21:24] total 612908
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas      5111 Mar  5 07:30 queuedata.json
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas    584627 Mar  5 07:30 pilot3.tar.gz
[2026-03-05 13:21:24] -rwx------ 1 boincer umatlas     36322 Mar  5 07:30 runpilot2-wrapper.sh
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas       100 Mar  5 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 13:21:24] -rwxr-xr-x 1 boincer umatlas      7986 Mar  5 12:15 run_atlas
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas       105 Mar  5 12:15 job.xml
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas 442261977 Mar  5 12:15 EVNT.46701403._000131.pool.root.1
[2026-03-05 13:21:24] drwxrwx--x 2 boincer umatlas      4096 Mar  5 12:15 shared
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas    597947 Mar  5 12:15 input.tar.gz
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 12:15 start_atlas.sh
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas         0 Mar  5 12:15 boinc_lockfile
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas      2558 Mar  5 12:15 pandaJob.out
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas        57 Mar  5 12:15 setup.sh.local
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas    998462 Mar  5 12:16 agis_schedconf.cvmfs.json
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas   1521291 Mar  5 12:16 agis_ddmendpoints.agis.ALL.json
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas       445 Mar  5 12:16 workernode_map.json
[2026-03-05 13:21:24] drwx------ 5 boincer umatlas      4096 Mar  5 12:16 pilot3
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas 179544948 Mar  5 13:20 HITS.48955006._006501.pool.root.1
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas      5953 Mar  5 13:20 init_data.xml
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas       530 Mar  5 13:20 boinc_task_state.xml
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas      1045 Mar  5 13:20 memory_monitor_summary.json
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas    360946 Mar  5 13:20 log.48955006._006501.job.log.tgz.1
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas      6409 Mar  5 13:20 heartbeat.json
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas        95 Mar  5 13:21 pilot_heartbeat.json
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 13:21 boinc_mmap_file
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas        27 Mar  5 13:21 wrapper_checkpoint.txt
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas      5030 Mar  5 13:21 pilotlog.txt
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas    571259 Mar  5 13:21 log.48955006._006501.job.log.1
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas       357 Mar  5 13:21 output.list
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas       620 Mar  5 13:21 runtime_log
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas    952320 Mar  5 13:21 result.tar.gz
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas       659 Mar  5 13:21 WLfKDmm1MI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYpNLDmz7gykn.diag
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas      9343 Mar  5 13:21 runtime_log.err
[2026-03-05 13:21:24] -rw-r--r-- 1 boincer umatlas     22029 Mar  5 13:21 stderr.txt
[2026-03-05 13:21:24] HITS file was successfully produced:
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas 179544948 Mar  5 13:20 shared/HITS.pool.root.1
[2026-03-05 13:21:24]  *** Contents of shared directory: ***
[2026-03-05 13:21:24] total 608776
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas 442261977 Mar  5 12:15 ATLAS.root_0
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas    597947 Mar  5 12:15 input.tar.gz
[2026-03-05 13:21:24] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 12:15 start_atlas.sh
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas 179544948 Mar  5 13:20 HITS.pool.root.1
[2026-03-05 13:21:24] -rw------- 1 boincer umatlas    952320 Mar  5 13:21 result.tar.gz
13:21:25 (14117): run_atlas exited; CPU time 42194.012074
13:21:25 (14117): called boinc_finish(0)

</stderr_txt>
]]>

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