Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 17:07:22 (12148): vboxwrapper version 26210
2026-03-06 17:07:22 (12148): BOINC client version: 8.0.2
2026-03-06 17:07:23 (12148): Detected: VirtualBox VboxManage Interface (Version: 6.1.18)
2026-03-06 17:07:24 (12148): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 17:07:24 (12148): Create VM. (boinc_edeedc5f27fbfbf4, slot#0)
2026-03-06 17:07:24 (12148): Setting Memory Size for VM. (5900MB)
2026-03-06 17:07:25 (12148): Setting CPU Count for VM. (2)
2026-03-06 17:07:25 (12148): Setting Chipset Options for VM.
2026-03-06 17:07:25 (12148): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 17:07:25 (12148): Setting Boot Options for VM.
2026-03-06 17:07:26 (12148): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 17:07:26 (12148): Enabling VM Network Access.
2026-03-06 17:07:27 (12148): Disabling USB Support for VM.
2026-03-06 17:07:27 (12148): Disabling COM Port Support for VM.
2026-03-06 17:07:27 (12148): Disabling LPT Port Support for VM.
2026-03-06 17:07:28 (12148): Disabling Audio Support for VM.
2026-03-06 17:07:28 (12148): Disabling Clipboard Support for VM.
2026-03-06 17:07:28 (12148): Disabling Drag and Drop Support for VM.
2026-03-06 17:07:28 (12148): Adding storage controller(s) to VM.
2026-03-06 17:07:29 (12148): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 17:07:30 (12148): Adding VirtualBox Guest Additions to VM.
2026-03-06 17:07:30 (12148): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 17:07:31 (12148): forwarding host port 53563 to guest port 80
2026-03-06 17:07:31 (12148): Enabling remote desktop for VM.
2026-03-06 17:07:31 (12148): Enabling shared directory for VM.
2026-03-06 17:07:32 (12148): Starting VM using VBoxManage interface. (boinc_edeedc5f27fbfbf4, slot#0)
2026-03-06 17:07:40 (12148): Successfully started VM. (PID = '9380')
2026-03-06 17:07:40 (12148): Reporting VM Process ID to BOINC.
2026-03-06 17:07:40 (12148): Guest Log: BIOS: VirtualBox 6.1.18
2026-03-06 17:07:40 (12148): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 17:07:40 (12148): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 17:07:40 (12148): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 17:07:40 (12148): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 17:07:40 (12148): Detected: Web Application Enabled (http://localhost:53563)
2026-03-06 17:07:40 (12148): Detected: Remote Desktop Enabled (localhost:53564)
2026-03-06 17:07:40 (12148): Preference change detected
2026-03-06 17:07:40 (12148): Setting CPU throttle for VM. (100%)
2026-03-06 17:07:40 (12148): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 17:07:42 (12148): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 17:07:42 (12148): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 17:07:45 (12148): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 17:07:45 (12148): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 17:07:45 (12148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 17:07:53 (12148): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 17:07:53 (12148): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-06 17:08:32 (12148): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000184 main     Log opened 2026-03-06T17:08:30.597649000Z
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000398 main     OS Product: Linux
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000484 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000541 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000598 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000600 main     Process ID: 1342
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.000601 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 17:08:32 (12148): Guest Log: 00:00:00.004055 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 17:08:33 (12148): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 17:08:33 (12148): Guest Log: [INFO] Mounting shared directory
2026-03-06 17:08:33 (12148): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 17:08:37 (12148): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 17:08:37 (12148): Guest Log: [INFO] Detected branch: prod
2026-03-06 17:08:37 (12148): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 17:08:37 (12148): Guest Log: Copying input files
2026-03-06 17:08:42 (12148): Guest Log: 00:00:10.013599 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 361 557 000ns (GuestNow=1 772 813 322 249 232 000 ns GuestLast=1 772 816 910 610 789 000 ns fSetTimeLastLoop=true )
2026-03-06 17:08:44 (12148): Guest Log: Copied input files into RunAtlas.
2026-03-06 17:08:44 (12148): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2026-03-06 17:08:55 (12148): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 17:08:56 (12148): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 17:08:56 (12148): Guest Log: 2.6.3.0 1615 0 31560 156961 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2026-03-06 17:08:57 (12148): Guest Log: copied the webapp to /var/www
2026-03-06 17:08:57 (12148): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-06 17:08:57 (12148): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-06 17:08:57 (12148): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 17:08:57 (12148): Guest Log:  *** Starting ATLAS job. (PandaID=7038649136 taskID=48955006) ***
2026-03-06 18:47:47 (12148): Status Report: Elapsed Time: '6000.000000'
2026-03-06 18:47:47 (12148): Status Report: CPU Time: '11361.062500'
2026-03-06 20:27:53 (12148): Status Report: Elapsed Time: '12000.000000'
2026-03-06 20:27:53 (12148): Status Report: CPU Time: '23308.046875'
2026-03-06 22:08:00 (12148): Status Report: Elapsed Time: '18000.000000'
2026-03-06 22:08:00 (12148): Status Report: CPU Time: '35251.843750'
2026-03-06 23:48:06 (12148): Status Report: Elapsed Time: '24000.000000'
2026-03-06 23:48:06 (12148): Status Report: CPU Time: '47192.437500'
2026-03-07 01:28:12 (12148): Status Report: Elapsed Time: '30000.000000'
2026-03-07 01:28:12 (12148): Status Report: CPU Time: '59134.796875'
2026-03-07 02:05:48 (12148): Guest Log:  *** Job finished ***
2026-03-07 02:05:48 (12148): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:37,979 | INFO     | all workflow threads have been joined
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:37,979 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:37,979 | INFO     | traces error code: 0
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:37,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,811 | INFO     | PID=5993 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,812 | INFO     | found 0 job(s) in 20 queues
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,813 | INFO     | [monitor] control thread has ended
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,908 [wrapper] ==== pilot stdout END ====
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,918 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,925 [wrapper] pilotpid: 5993
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,934 [wrapper] Pilot exit status: 0
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:47,968 [wrapper] pandaids: 7038649136
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:48,016 [wrapper] cleanup supervisor_pilot   975 5994
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:48,028 [wrapper] Test setup, not cleaning
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:48,034 [wrapper] apfmon messages muted
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:48,040 [wrapper] ==== wrapper stdout END ====
2026-03-07 02:05:48 (12148): Guest Log: 2026-03-07 01:05:48,046 [wrapper] ==== wrapper stderr END ====
2026-03-07 02:05:48 (12148): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 02:05:48 (12148): Guest Log:     "exeErrorCode": 0,
2026-03-07 02:05:48 (12148): Guest Log:     "exeErrorDiag": "",
2026-03-07 02:05:48 (12148): Guest Log:     "pilotErrorCode": 0,
2026-03-07 02:05:48 (12148): Guest Log:     "pilotErrorDiag": "",
2026-03-07 02:05:48 (12148): Guest Log:  *** Listing of results directory ***
2026-03-07 02:05:48 (12148): Guest Log: total 192552
2026-03-07 02:05:48 (12148): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 16:55 pilot3.tar.gz
2026-03-07 02:05:48 (12148): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 16:55 queuedata.json
2026-03-07 02:05:48 (12148): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 16:55 runpilot2-wrapper.sh
2026-03-07 02:05:48 (12148): Guest Log: -rwxr-xr-x. 1 atlas atlas      9106 Mar  6 16:08 init_data.xml
2026-03-07 02:05:48 (12148): Guest Log: -rwxr-xr-x. 1 atlas atlas    597958 Mar  6 16:08 input.tar.gz
2026-03-07 02:05:48 (12148): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 16:08 start_atlas.sh
2026-03-07 02:05:48 (12148): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 16:08 EVNT.46701403._000188.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 02:05:48 (12148): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Mar  6 16:08 pandaJob.out
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas        49 Mar  6 16:09 setup.sh.local
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas    998899 Mar  6 16:09 agis_schedconf.cvmfs.json
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas       427 Mar  6 16:09 workernode_map.json
2026-03-07 02:05:48 (12148): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 16:10 pilot3
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas 183145461 Mar  7 01:04 HITS.48955006._009379.pool.root.1
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  7 01:05 memory_monitor_summary.json
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 01:05 agis_ddmendpoints.agis.ALL.json
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas    634126 Mar  7 01:05 log.48955006._009379.job.log.tgz.1
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas      6372 Mar  7 01:05 heartbeat.json
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas       744 Mar  7 01:05 pilotlog.txt
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas        95 Mar  7 01:05 pilot_heartbeat.json
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas   4443647 Mar  7 01:05 log.48955006._009379.job.log.1
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 01:05 output.list
2026-03-07 02:05:48 (12148): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 01:05 runtime_log
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas   5099520 Mar  7 01:05 result.tar.gz
2026-03-07 02:05:48 (12148): Guest Log: -rw-r--r--. 1 atlas atlas      9236 Mar  7 01:05 runtime_log.err
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas       659 Mar  7 01:05 c8wMDm79QI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQNMLDmZbWGjm.diag
2026-03-07 02:05:48 (12148): Guest Log: Looking for outputfile HITS.48955006._009379.pool.root.1
2026-03-07 02:05:48 (12148): Guest Log: HITS file was successfully produced
2026-03-07 02:05:48 (12148): Guest Log: -rw-------. 1 atlas atlas 183145461 Mar  7 01:04 /home/atlas/RunAtlas/HITS.48955006._009379.pool.root.1
2026-03-07 02:05:51 (12148): Guest Log: Successfully finished the ATLAS job!
2026-03-07 02:05:51 (12148): Guest Log: Copying the results back to the shared directory!
2026-03-07 02:05:51 (12148): Guest Log:  *** Contents of shared directory: ***
2026-03-07 02:05:51 (12148): Guest Log: total 615844
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root 441749435 Mar  6 16:07 ATLAS.root_0
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root 183145461 Mar  7 01:05 HITS.pool.root.1
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root      9106 Mar  6 16:07 init_data.xml
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root    597958 Mar  5 19:51 input.tar.gz
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root   5099520 Mar  7 01:05 result.tar.gz
2026-03-07 02:05:51 (12148): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 19:51 start_atlas.sh
2026-03-07 02:05:51 (12148): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 02:05:51 (12148): VM Completion File Detected.
2026-03-07 02:05:51 (12148): Powering off VM.
2026-03-07 02:05:52 (12148): Successfully stopped VM.
2026-03-07 02:05:52 (12148): Deregistering VM. (boinc_edeedc5f27fbfbf4, slot#0)
2026-03-07 02:05:52 (12148): Removing network bandwidth throttle group from VM.
2026-03-07 02:05:52 (12148): Removing VM from VirtualBox.
2026-03-07 02:05:58 (12148): called boinc_finish(0)

</stderr_txt>
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