Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 08:11:12 (14608): vboxwrapper version 26210
2026-03-06 08:11:12 (14608): BOINC client version: 8.2.8
2026-03-06 08:11:13 (14608): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2026-03-06 08:11:13 (14608): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 08:11:13 (14608): Create VM. (boinc_06e8ba9380d05dfd, slot#1)
2026-03-06 08:11:14 (14608): Setting Memory Size for VM. (4800MB)
2026-03-06 08:11:14 (14608): Setting CPU Count for VM. (8)
2026-03-06 08:11:14 (14608): Setting Chipset Options for VM.
2026-03-06 08:11:15 (14608): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 08:11:15 (14608): Setting Boot Options for VM.
2026-03-06 08:11:15 (14608): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 08:11:16 (14608): Enabling VM Network Access.
2026-03-06 08:11:16 (14608): Disabling USB Support for VM.
2026-03-06 08:11:16 (14608): Disabling COM Port Support for VM.
2026-03-06 08:11:16 (14608): Disabling LPT Port Support for VM.
2026-03-06 08:11:17 (14608): Disabling Audio Support for VM.
2026-03-06 08:11:17 (14608): Disabling Clipboard Support for VM.
2026-03-06 08:11:18 (14608): Disabling Drag and Drop Support for VM.
2026-03-06 08:11:18 (14608): Adding storage controller(s) to VM.
2026-03-06 08:11:19 (14608): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 08:11:20 (14608): Adding VirtualBox Guest Additions to VM.
2026-03-06 08:11:20 (14608): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 08:11:20 (14608): forwarding host port 50840 to guest port 80
2026-03-06 08:11:20 (14608): Enabling remote desktop for VM.
2026-03-06 08:11:21 (14608): Required extension pack not installed, remote desktop not enabled.
2026-03-06 08:11:21 (14608): Enabling shared directory for VM.
2026-03-06 08:11:21 (14608): Starting VM using VBoxManage interface. (boinc_06e8ba9380d05dfd, slot#1)
2026-03-06 08:11:29 (14608): Successfully started VM. (PID = '20544')
2026-03-06 08:11:29 (14608): Reporting VM Process ID to BOINC.
2026-03-06 08:11:29 (14608): Guest Log: BIOS: VirtualBox 7.0.10
2026-03-06 08:11:29 (14608): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 08:11:29 (14608): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 08:11:29 (14608): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 08:11:29 (14608): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 08:11:29 (14608): Detected: Web Application Enabled (http://localhost:50840)
2026-03-06 08:11:29 (14608): Preference change detected
2026-03-06 08:11:29 (14608): Setting CPU throttle for VM. (100%)
2026-03-06 08:11:29 (14608): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 08:11:31 (14608): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 08:11:31 (14608): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 08:11:34 (14608): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 08:11:34 (14608): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 08:11:34 (14608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 08:11:41 (14608): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 08:11:41 (14608): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-06 08:11:51 (14608): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000282 main     Log opened 2026-03-06T08:11:49.559725000Z
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000471 main     OS Product: Linux
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000576 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000637 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000711 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000713 main     Process ID: 1372
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.000714 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 08:11:51 (14608): Guest Log: 00:00:00.002359 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 08:11:51 (14608): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 08:11:51 (14608): Guest Log: [INFO] Mounting shared directory
2026-03-06 08:11:51 (14608): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 08:12:01 (14608): Guest Log: 00:00:10.006285 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 760 426 000ns (GuestNow=1 772 777 520 803 612 000 ns GuestLast=1 772 784 709 564 038 000 ns fSetTimeLastLoop=true )
2026-03-06 08:12:53 (14608): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 08:12:53 (14608): Guest Log: [INFO] Detected branch: prod
2026-03-06 08:12:53 (14608): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 08:12:53 (14608): Guest Log: Copying input files
2026-03-06 08:12:58 (14608): Guest Log: Copied input files into RunAtlas.
2026-03-06 08:12:58 (14608): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 08:12:58 (14608): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 08:12:58 (14608): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 08:12:58 (14608): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 08:13:11 (14608): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 08:13:11 (14608): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 08:13:11 (14608): Guest Log: 2.6.3.0 1671 0 30376 156947 4 1 3120742 4096001 0 65024 0 0 n/a 1337 435 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2026-03-06 08:13:13 (14608): Guest Log: copied the webapp to /var/www
2026-03-06 08:13:13 (14608): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-06 08:13:13 (14608): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-06 08:13:13 (14608): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 08:13:13 (14608): Guest Log:  *** Starting ATLAS job. (PandaID=7038647768 taskID=48955006) ***
2026-03-06 09:03:58 (14608): VM state change detected. (old = 'running', new = 'paused')
2026-03-06 09:04:18 (14608): VM state change detected. (old = 'paused', new = 'running')
2026-03-06 09:51:58 (14608): Status Report: Elapsed Time: '6000.000000'
2026-03-06 09:51:58 (14608): Status Report: CPU Time: '33926.296875'
2026-03-06 11:32:07 (14608): Status Report: Elapsed Time: '12000.000000'
2026-03-06 11:32:07 (14608): Status Report: CPU Time: '80563.421875'
2026-03-06 11:55:56 (14608): Guest Log:  *** Job finished ***
2026-03-06 11:55:56 (14608): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:08,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:08,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:33,012 | INFO     | [monitor] cgroup control has ended
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:33,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037176858432)>', '<ExcThread(monitor, started 140036569806592)>']
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:34,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:34,195 | INFO     | [monitor] control thread has ended
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,239 | INFO     | all workflow threads have been joined
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,240 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,240 | INFO     | traces error code: 0
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,382 [wrapper] ==== pilot stdout END ====
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,388 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,399 [wrapper] pilotpid: 6154
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,406 [wrapper] Pilot exit status: 0
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,717 [wrapper] pandaids: 7038647768
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,790 [wrapper] cleanup supervisor_pilot 27828 6155
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,798 [wrapper] Test setup, not cleaning
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,806 [wrapper] apfmon messages muted
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,813 [wrapper] ==== wrapper stdout END ====
2026-03-06 11:55:56 (14608): Guest Log: 2026-03-06 09:55:38,820 [wrapper] ==== wrapper stderr END ====
2026-03-06 11:55:56 (14608): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 11:55:56 (14608): Guest Log:     "exeErrorCode": 0,
2026-03-06 11:55:56 (14608): Guest Log:     "exeErrorDiag": "",
2026-03-06 11:55:56 (14608): Guest Log:     "pilotErrorCode": 0,
2026-03-06 11:55:56 (14608): Guest Log:     "pilotErrorDiag": "",
2026-03-06 11:55:56 (14608): Guest Log:  *** Listing of results directory ***
2026-03-06 11:55:56 (14608): Guest Log: total 189336
2026-03-06 11:55:56 (14608): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 16:55 pilot3.tar.gz
2026-03-06 11:55:56 (14608): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 16:55 queuedata.json
2026-03-06 11:55:56 (14608): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 16:55 runpilot2-wrapper.sh
2026-03-06 11:55:56 (14608): Guest Log: -rwxr-xr-x. 1 atlas atlas      8260 Mar  6 06:12 init_data.xml
2026-03-06 11:55:56 (14608): Guest Log: -rwxr-xr-x. 1 atlas atlas    597949 Mar  6 06:12 input.tar.gz
2026-03-06 11:55:56 (14608): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 06:12 start_atlas.sh
2026-03-06 11:55:56 (14608): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 06:12 EVNT.46701403._000181.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 11:55:56 (14608): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  6 06:13 pandaJob.out
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas    998544 Mar  6 06:18 agis_schedconf.cvmfs.json
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas       445 Mar  6 06:18 workernode_map.json
2026-03-06 11:55:56 (14608): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 06:19 pilot3
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas 185557831 Mar  6 09:54 HITS.48955006._009012.pool.root.1
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas      1041 Mar  6 09:54 memory_monitor_summary.json
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 09:54 agis_ddmendpoints.agis.ALL.json
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas    443253 Mar  6 09:54 log.48955006._009012.job.log.tgz.1
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas      6420 Mar  6 09:54 heartbeat.json
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 09:55 pilot_heartbeat.json
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  6 09:55 pilotlog.txt
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas   1782310 Mar  6 09:55 log.48955006._009012.job.log.1
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 09:55 output.list
2026-03-06 11:55:56 (14608): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 09:55 runtime_log
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas   2242560 Mar  6 09:55 result.tar.gz
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas       660 Mar  6 09:55 sWJODmo9QI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4KOLDmMpXC7n.diag
2026-03-06 11:55:56 (14608): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Mar  6 09:55 runtime_log.err
2026-03-06 11:55:56 (14608): Guest Log: Looking for outputfile HITS.48955006._009012.pool.root.1
2026-03-06 11:55:56 (14608): Guest Log: HITS file was successfully produced
2026-03-06 11:55:56 (14608): Guest Log: -rw-------. 1 atlas atlas 185557831 Mar  6 09:54 /home/atlas/RunAtlas/HITS.48955006._009012.pool.root.1
2026-03-06 11:55:58 (14608): Guest Log: Successfully finished the ATLAS job!
2026-03-06 11:55:58 (14608): Guest Log: Copying the results back to the shared directory!
2026-03-06 11:55:58 (14608): Guest Log:  *** Contents of shared directory: ***
2026-03-06 11:56:00 (14608): Guest Log: total 610608
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root 436828178 Mar  6 06:11 ATLAS.root_0
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root 185557831 Mar  6  2026 HITS.pool.root.1
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root      8260 Mar  6 06:11 init_data.xml
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root    597949 Mar  5 19:45 input.tar.gz
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root   2242560 Mar  6  2026 result.tar.gz
2026-03-06 11:56:00 (14608): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 19:45 start_atlas.sh
2026-03-06 11:56:00 (14608): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 11:56:00 (14608): VM Completion File Detected.
2026-03-06 11:56:00 (14608): Powering off VM.
2026-03-06 11:56:01 (14608): Successfully stopped VM.
2026-03-06 11:56:01 (14608): Deregistering VM. (boinc_06e8ba9380d05dfd, slot#1)
2026-03-06 11:56:01 (14608): Removing network bandwidth throttle group from VM.
2026-03-06 11:56:01 (14608): Removing VM from VirtualBox.
2026-03-06 11:56:07 (14608): called boinc_finish(0)

</stderr_txt>
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