Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 11:59:07 (3844): vboxwrapper version 26210
2026-03-05 11:59:07 (3844): BOINC client version: 8.2.8
2026-03-05 11:59:08 (3844): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-05 11:59:08 (3844): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 11:59:09 (3844): Create VM. (boinc_2ff0ae75242bcf48, slot#1)
2026-03-05 11:59:09 (3844): Setting Memory Size for VM. (4400MB)
2026-03-05 11:59:09 (3844): Setting CPU Count for VM. (4)
2026-03-05 11:59:10 (3844): Setting Chipset Options for VM.
2026-03-05 11:59:10 (3844): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 11:59:10 (3844): Setting Boot Options for VM.
2026-03-05 11:59:11 (3844): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 11:59:11 (3844): Enabling VM Network Access.
2026-03-05 11:59:11 (3844): Disabling USB Support for VM.
2026-03-05 11:59:12 (3844): Disabling COM Port Support for VM.
2026-03-05 11:59:12 (3844): Disabling LPT Port Support for VM.
2026-03-05 11:59:12 (3844): Disabling Audio Support for VM.
2026-03-05 11:59:12 (3844): Disabling Clipboard Support for VM.
2026-03-05 11:59:13 (3844): Disabling Drag and Drop Support for VM.
2026-03-05 11:59:13 (3844): Adding storage controller(s) to VM.
2026-03-05 11:59:13 (3844): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 11:59:15 (3844): Adding VirtualBox Guest Additions to VM.
2026-03-05 11:59:16 (3844): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 11:59:16 (3844): forwarding host port 54121 to guest port 80
2026-03-05 11:59:16 (3844): Enabling remote desktop for VM.
2026-03-05 11:59:16 (3844): Required extension pack not installed, remote desktop not enabled.
2026-03-05 11:59:16 (3844): Enabling shared directory for VM.
2026-03-05 11:59:17 (3844): Starting VM using VBoxManage interface. (boinc_2ff0ae75242bcf48, slot#1)
2026-03-05 11:59:21 (3844): Successfully started VM. (PID = '18256')
2026-03-05 11:59:21 (3844): Reporting VM Process ID to BOINC.
2026-03-05 11:59:21 (3844): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-05 11:59:21 (3844): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 11:59:21 (3844): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 11:59:21 (3844): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 11:59:21 (3844): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 11:59:21 (3844): Detected: Web Application Enabled (http://localhost:54121)
2026-03-05 11:59:21 (3844): Preference change detected
2026-03-05 11:59:21 (3844): Setting CPU throttle for VM. (80%)
2026-03-05 11:59:21 (3844): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 11:59:23 (3844): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 11:59:23 (3844): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 11:59:26 (3844): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 11:59:26 (3844): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 11:59:26 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 11:59:32 (3844): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 11:59:32 (3844): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 11:59:38 (3844): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000284 main     Log opened 2026-03-05T11:59:36.868282000Z
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000350 main     OS Product: Linux
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000363 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000374 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000385 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000385 main     Process ID: 1306
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.000385 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 11:59:38 (3844): Guest Log: 00:00:00.001039 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 11:59:38 (3844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 11:59:38 (3844): Guest Log: [INFO] Mounting shared directory
2026-03-05 11:59:38 (3844): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 11:59:42 (3844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 11:59:42 (3844): Guest Log: [INFO] Detected branch: prod
2026-03-05 11:59:42 (3844): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 11:59:42 (3844): Guest Log: Copying input files
2026-03-05 11:59:44 (3844): Guest Log: Copied input files into RunAtlas.
2026-03-05 11:59:44 (3844): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 11:59:44 (3844): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 11:59:44 (3844): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 11:59:44 (3844): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 11:59:48 (3844): Guest Log: 00:00:10.009160 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 303 001 000ns (GuestNow=1 772 729 988 173 568 000 ns GuestLast=1 772 711 976 870 567 000 ns fSetTimeLastLoop=true )
2026-03-05 11:59:52 (3844): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 11:59:52 (3844): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 11:59:52 (3844): Guest Log: 2.6.3.0 1585 0 30116 156926 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 11:59:53 (3844): Guest Log: copied the webapp to /var/www
2026-03-05 11:59:53 (3844): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-05 11:59:53 (3844): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-05 11:59:54 (3844): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 11:59:54 (3844): Guest Log:  *** Starting ATLAS job. (PandaID=7038627163 taskID=48955006) ***
2026-03-05 13:39:25 (3844): Status Report: Elapsed Time: '6000.000000'
2026-03-05 13:39:25 (3844): Status Report: CPU Time: '17087.328125'
2026-03-05 15:19:30 (3844): Status Report: Elapsed Time: '12000.000000'
2026-03-05 15:19:30 (3844): Status Report: CPU Time: '35663.718750'
2026-03-05 15:39:27 (3844): Guest Log:  *** Job finished ***
2026-03-05 15:39:27 (3844): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:38:51,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:38:51,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:19,101 | INFO     | [monitor] cgroup control has ended
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:19,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268010678080)>', '<ExcThread(monitor, started 140267558516480)>']
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:20,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:20,124 | INFO     | [monitor] control thread has ended
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,660 | INFO     | all workflow threads have been joined
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,660 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,660 | INFO     | traces error code: 0
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,859 [wrapper] ==== pilot stdout END ====
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,903 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,928 [wrapper] pilotpid: 5987
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:24,955 [wrapper] Pilot exit status: 0
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,055 [wrapper] pandaids: 7038627163
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,226 [wrapper] cleanup supervisor_pilot 27926 5988
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,248 [wrapper] Test setup, not cleaning
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,272 [wrapper] apfmon messages muted
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,294 [wrapper] ==== wrapper stdout END ====
2026-03-05 15:39:27 (3844): Guest Log: 2026-03-05 20:39:25,312 [wrapper] ==== wrapper stderr END ====
2026-03-05 15:39:27 (3844): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 15:39:27 (3844): Guest Log:     "exeErrorCode": 0,
2026-03-05 15:39:27 (3844): Guest Log:     "exeErrorDiag": "",
2026-03-05 15:39:27 (3844): Guest Log:     "pilotErrorCode": 0,
2026-03-05 15:39:27 (3844): Guest Log:     "pilotErrorDiag": "",
2026-03-05 15:39:27 (3844): Guest Log:  *** Listing of results directory ***
2026-03-05 15:39:27 (3844): Guest Log: total 187812
2026-03-05 15:39:27 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 12:30 queuedata.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 12:30 pilot3.tar.gz
2026-03-05 15:39:27 (3844): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 12:30 runpilot2-wrapper.sh
2026-03-05 15:39:27 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas     15013 Mar  5 16:59 init_data.xml
2026-03-05 15:39:27 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas    597957 Mar  5 16:59 input.tar.gz
2026-03-05 15:39:27 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 16:59 start_atlas.sh
2026-03-05 15:39:27 (3844): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 16:59 EVNT.46701403._000130.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 15:39:27 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  5 16:59 pandaJob.out
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas    998462 Mar  5 17:00 agis_schedconf.cvmfs.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas       423 Mar  5 17:00 workernode_map.json
2026-03-05 15:39:27 (3844): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 17:01 pilot3
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas 184034403 Mar  5 20:37 HITS.48955006._006470.pool.root.1
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas      1032 Mar  5 20:38 memory_monitor_summary.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 20:38 pilot_heartbeat.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 20:38 agis_ddmendpoints.agis.ALL.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas    392021 Mar  5 20:38 log.48955006._006470.job.log.tgz.1
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas      6367 Mar  5 20:38 heartbeat.json
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas      4987 Mar  5 20:39 pilotlog.txt
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas   1817161 Mar  5 20:39 log.48955006._006470.job.log.1
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 20:39 output.list
2026-03-05 15:39:27 (3844): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 20:39 runtime_log
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas   2222080 Mar  5 20:39 result.tar.gz
2026-03-05 15:39:27 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      8719 Mar  5 20:39 runtime_log.err
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas       648 Mar  5 20:39 ffIODml1MI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHpNLDmE8SdKm.diag
2026-03-05 15:39:27 (3844): Guest Log: Looking for outputfile HITS.48955006._006470.pool.root.1
2026-03-05 15:39:27 (3844): Guest Log: HITS file was successfully produced
2026-03-05 15:39:27 (3844): Guest Log: -rw-------. 1 atlas atlas 184034403 Mar  5 20:37 /home/atlas/RunAtlas/HITS.48955006._006470.pool.root.1
2026-03-05 15:39:31 (3844): Guest Log: Successfully finished the ATLAS job!
2026-03-05 15:39:31 (3844): Guest Log: Copying the results back to the shared directory!
2026-03-05 15:39:31 (3844): Guest Log:  *** Contents of shared directory: ***
2026-03-05 15:39:31 (3844): Guest Log: total 612052
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root 439845823 Mar  5 16:59 ATLAS.root_0
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root 184034403 Mar  5 20:39 HITS.pool.root.1
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root     15013 Mar  5 16:59 init_data.xml
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root    597957 Mar  5 16:58 input.tar.gz
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root   2222080 Mar  5 20:39 result.tar.gz
2026-03-05 15:39:31 (3844): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 16:58 start_atlas.sh
2026-03-05 15:39:31 (3844): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 15:39:31 (3844): VM Completion File Detected.
2026-03-05 15:39:31 (3844): Powering off VM.
2026-03-05 15:39:31 (3844): Successfully stopped VM.
2026-03-05 15:39:31 (3844): Deregistering VM. (boinc_2ff0ae75242bcf48, slot#1)
2026-03-05 15:39:31 (3844): Removing network bandwidth throttle group from VM.
2026-03-05 15:39:31 (3844): Removing VM from VirtualBox.
2026-03-05 15:39:37 (3844): called boinc_finish(0)

</stderr_txt>
]]>

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