Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:48:00 (1865591): wrapper (7.7.26015): starting
15:48:00 (1865591): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 15:48:00] Arguments: --nthreads 4
[2026-03-06 15:48:00] Threads: 4
[2026-03-06 15:48:00] Checking for CVMFS
[2026-03-06 15:48:00] No cvmfs_config command found, will try listing directly
[2026-03-06 15:48:00] CVMFS is ok
[2026-03-06 15:48:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 15:48:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 15:48:00] Further information can be found at the LHC@home message board.
[2026-03-06 15:48:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 15:48:00] Checking for apptainer binary...
[2026-03-06 15:48:00] which: no apptainer in ((null))
[2026-03-06 15:48:00] apptainer is not installed, using version from CVMFS
[2026-03-06 15:48:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 15:48:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-06 15:48:00] apptainer works
[2026-03-06 15:48:00] Set ATHENA_PROC_NUMBER=4
[2026-03-06 15:48:00] Set ATHENA_CORE_NUMBER=4
[2026-03-06 15:48:00] Starting ATLAS job with PandaID=7038637547
[2026-03-06 15:48:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 19:37:28]  *** The last 200 lines of the pilot log: ***
[2026-03-06 19:37:28] 2026-03-06 18:35:57,331 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18138/.job.ad'
[2026-03-06 19:37:28] 2026-03-06 18:35:57,332 | INFO     | total number of processed events: 400 (read)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,375 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7038637547/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,376 | INFO     | extracted standard info from prmon json
[2026-03-06 19:37:28] 2026-03-06 18:35:57,377 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 19:37:28] 2026-03-06 18:35:57,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 19:37:28] 2026-03-06 18:35:57,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 19:37:28] 2026-03-06 18:35:57,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 19:37:28] 2026-03-06 18:35:57,385 | INFO     | fitting pss+swap vs Time
[2026-03-06 19:37:28] 2026-03-06 18:35:57,385 | INFO     | sum of square deviations: 3485088600.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,388 | INFO     | sum of deviations: 18946938367.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,389 | INFO     | mean x: 1772815334.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,389 | INFO     | mean y: 2303896.125
[2026-03-06 19:37:28] 2026-03-06 18:35:57,389 | INFO     | intersect: -9635735974.323053
[2026-03-06 19:37:28] 2026-03-06 18:35:57,390 | INFO     | chi2: 2.2031195808689583
[2026-03-06 19:37:28] 2026-03-06 18:35:57,390 | INFO     | sum of square deviations: 3256879670.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,393 | INFO     | sum of deviations: 32450129313.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,393 | INFO     | mean x: 1772815182.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,393 | INFO     | mean y: 2312748.497716895
[2026-03-06 19:37:28] 2026-03-06 18:35:57,393 | INFO     | intersect: -17661244930.300297
[2026-03-06 19:37:28] 2026-03-06 18:35:57,394 | INFO     | chi2: 1.3914727380256111
[2026-03-06 19:37:28] 2026-03-06 18:35:57,394 | INFO     | current chi2=1.3914727380256111 (change=36.84079837932428 %)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,395 | INFO     | sum of square deviations: 3038856977.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,397 | INFO     | sum of deviations: 31558019319.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,397 | INFO     | mean x: 1772815029.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,398 | INFO     | mean y: 2312124.38317757
[2026-03-06 19:37:28] 2026-03-06 18:35:57,398 | INFO     | intersect: -18408074203.176247
[2026-03-06 19:37:28] 2026-03-06 18:35:57,398 | INFO     | chi2: 1.3920817029463541
[2026-03-06 19:37:28] 2026-03-06 18:35:57,399 | INFO     | current chi2=1.3920817029463541 (change=-0.04376405689464673 %)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,399 | INFO     | right removable region: 213
[2026-03-06 19:37:28] 2026-03-06 18:35:57,399 | INFO     | sum of square deviations: 3256879670.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,402 | INFO     | sum of deviations: -11296838209.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,402 | INFO     | mean x: 1772815487.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,402 | INFO     | mean y: 2323887.2739726026
[2026-03-06 19:37:28] 2026-03-06 18:35:57,403 | INFO     | intersect: 6151525503.63229
[2026-03-06 19:37:28] 2026-03-06 18:35:57,403 | INFO     | chi2: 0.8364051436213437
[2026-03-06 19:37:28] 2026-03-06 18:35:57,403 | INFO     | current chi2=0.8364051436213437 (change=62.03541782823031 %)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,404 | INFO     | sum of square deviations: 3038856977.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,407 | INFO     | sum of deviations: -9281769119.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,407 | INFO     | mean x: 1772815639.5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,407 | INFO     | mean y: 2322480.8925233646
[2026-03-06 19:37:28] 2026-03-06 18:35:57,407 | INFO     | intersect: 5417143112.173038
[2026-03-06 19:37:28] 2026-03-06 18:35:57,408 | INFO     | chi2: 0.8335600378778557
[2026-03-06 19:37:28] 2026-03-06 18:35:57,408 | INFO     | current chi2=0.8335600378778557 (change=0.34015880523757097 %)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,408 | INFO     | left removable region: 20
[2026-03-06 19:37:28] 2026-03-06 18:35:57,409 | INFO     | sum of square deviations: 2229146912.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,411 | INFO     | sum of deviations: 4332146556.000001
[2026-03-06 19:37:28] 2026-03-06 18:35:57,411 | INFO     | mean x: 1772815609.0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,412 | INFO     | mean y: 2331712.7461139895
[2026-03-06 19:37:28] 2026-03-06 18:35:57,412 | INFO     | intersect: -3442975993.806874
[2026-03-06 19:37:28] 2026-03-06 18:35:57,412 | INFO     | chi2: 0.0002728439102344484
[2026-03-06 19:37:28] 2026-03-06 18:35:57,413 | INFO     | current memory leak: 1.94 B/s (using 193 data points, chi2=0.00)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,413 | INFO     | could have reported an average CPU frequency of 1995 MHz (11 samples)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | ..............................
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . Timing measurements:
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . get job = 0 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . initial setup = 11 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . payload setup = 12 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . stage-in = 0 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,414 | INFO     | . payload execution = 13630 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,415 | INFO     | . stage-out = 1 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,415 | INFO     | . log creation = 0 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,415 | INFO     | ..............................
[2026-03-06 19:37:28] 2026-03-06 18:35:57,497 | INFO     | time since job start (13648s) is within the limit (349056.0s)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,579 | INFO     | 
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | job summary report
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | --------------------------------------------------
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | PanDA job id: 7038637547
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | task id: 48955006
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | errors: (none)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,580 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | pilot state: finished 
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | transexitcode: 0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | exeerrorcode: 0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | exeerrordiag: 
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | exitcode: 0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,581 | INFO     | exitmsg: OK
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | cpuconsumptiontime: 50586 s
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | nevents: 400
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | neventsw: 0
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | pid: 1875469
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | pgrp: 1875469
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | corecount: 4
[2026-03-06 19:37:28] 2026-03-06 18:35:57,582 | INFO     | event service: False
[2026-03-06 19:37:28] 2026-03-06 18:35:57,583 | INFO     | sizes: {0: 2295323, 1: 2295840, 2: 2295840, 13644: 2326158, 13646: 2335234, 13647: 2335372}
[2026-03-06 19:37:28] 2026-03-06 18:35:57,583 | INFO     | --------------------------------------------------
[2026-03-06 19:37:28] 2026-03-06 18:35:57,583 | INFO     | 
[2026-03-06 19:37:28] 2026-03-06 18:35:57,583 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/5
[2026-03-06 19:37:28] 2026-03-06 18:35:57,627 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,631 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 19:37:28] 2026-03-06 18:35:57,631 | INFO     | job 7038637547 has completed (purged errors)
[2026-03-06 19:37:28] 2026-03-06 18:35:57,631 | INFO     | overall cleanup function is called
[2026-03-06 19:37:28] 2026-03-06 18:35:58,643 | INFO     | --- collectZombieJob: --- 10, [1875469]
[2026-03-06 19:37:28] 2026-03-06 18:35:58,643 | INFO     | zombie collector waiting for pid 1875469
[2026-03-06 19:37:28] 2026-03-06 18:35:58,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 19:37:28] 2026-03-06 18:35:58,644 | INFO     | collected zombie processes
[2026-03-06 19:37:28] 2026-03-06 18:35:58,644 | INFO     | will attempt to kill all subprocesses of pid=1875469
[2026-03-06 19:37:28] 2026-03-06 18:36:00,303 | INFO     | process IDs to be killed: [1875469] (in reverse order)
[2026-03-06 19:37:28] 2026-03-06 18:36:00,913 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 19:37:28] 2026-03-06 18:36:00,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 19:37:28] 2026-03-06 18:36:00,969 | INFO     | did not find any defunct processes belonging to 1875469
[2026-03-06 19:37:28] 2026-03-06 18:36:01,028 | INFO     | did not find any defunct processes belonging to 1875469
[2026-03-06 19:37:28] 2026-03-06 18:36:01,029 | INFO     | ready for new job
[2026-03-06 19:37:28] 2026-03-06 18:36:01,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 19:37:28] 2026-03-06 18:36:01,033 | INFO     | **************************************
[2026-03-06 19:37:28] 2026-03-06 18:36:01,033 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 19:37:28] 2026-03-06 18:36:01,033 | INFO     | **************************************
[2026-03-06 19:37:28] 2026-03-06 18:36:01,033 | INFO     | 
[2026-03-06 19:37:28] 2026-03-06 18:36:01,048 | INFO     | architecture information:
[2026-03-06 19:37:28] 2026-03-06 18:36:01,054 | INFO     | executing command: cat /etc/os-release
[2026-03-06 19:37:28] 2026-03-06 18:36:01,089 | INFO     | cat /etc/os-release:
[2026-03-06 19:37:28] NAME="CentOS Linux"
[2026-03-06 19:37:28] VERSION="7 (Core)"
[2026-03-06 19:37:28] ID="centos"
[2026-03-06 19:37:28] ID_LIKE="rhel fedora"
[2026-03-06 19:37:28] VERSION_ID="7"
[2026-03-06 19:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 19:37:28] ANSI_COLOR="0;31"
[2026-03-06 19:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 19:37:28] HOME_URL="https://www.centos.org/"
[2026-03-06 19:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 19:37:28] 
[2026-03-06 19:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 19:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 19:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 19:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 19:37:28] 
[2026-03-06 19:37:28] 2026-03-06 18:36:01,089 | INFO     | **************************************
[2026-03-06 19:37:28] 2026-03-06 18:36:01,592 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/5
[2026-03-06 19:37:28] 2026-03-06 18:36:01,638 | INFO     | sufficient remaining disk space (207690399744 B)
[2026-03-06 19:37:28] 2026-03-06 18:36:01,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 19:37:28] 2026-03-06 18:36:01,639 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 19:37:28] 2026-03-06 18:36:01,639 | INFO     | update_server=False
[2026-03-06 19:37:28] 2026-03-06 18:36:01,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 19:37:28] 2026-03-06 18:36:02,372 | INFO     | all data control threads have been joined
[2026-03-06 19:37:28] 2026-03-06 18:36:02,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 19:37:28] 2026-03-06 18:36:02,560 | INFO     | aborting loop
[2026-03-06 19:37:28] 2026-03-06 18:36:02,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 19:37:28] 2026-03-06 18:36:02,644 | INFO     | [job] retrieve thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:02,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 19:37:28] 2026-03-06 18:36:02,724 | INFO     | [job] validate thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:02,731 | INFO     | all payload control threads have been joined
[2026-03-06 19:37:28] 2026-03-06 18:36:02,986 | INFO     | [payload] failed_post thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:02,997 | INFO     | [data] copytool_in thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,068 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,090 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,227 | INFO     | all job control threads have been joined
[2026-03-06 19:37:28] 2026-03-06 18:36:03,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 19:37:28] 2026-03-06 18:36:03,377 | INFO     | [data] control thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,564 | INFO     | [job] job monitor thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,599 | INFO     | [job] queue monitor thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,736 | INFO     | [payload] control thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,754 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:03,816 | INFO     | job.realtimelogging is not enabled
[2026-03-06 19:37:28] 2026-03-06 18:36:03,990 | INFO     | [payload] validate_post thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:04,235 | INFO     | [job] control thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:04,682 | INFO     | [data] copytool_out thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:04,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:07,336 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 19:37:28] 2026-03-06 18:36:32,335 | INFO     | PID=1869704 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-06 19:37:28] 2026-03-06 18:36:32,335 | INFO     | .. there are 23 such processes running
[2026-03-06 19:37:28] 2026-03-06 18:36:32,336 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 19:37:28] 2026-03-06 18:36:32,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 19:37:28] 2026-03-06 18:36:32,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 19:37:28] 2026-03-06 18:36:51,731 | INFO     | [monitor] cgroup control has ended
[2026-03-06 19:37:28] 2026-03-06 18:36:52,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23243553630016)>', '<ExcThread(monitor, started 23243313653504)>']
[2026-03-06 19:37:28] 2026-03-06 18:36:53,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 19:37:28] 2026-03-06 18:36:53,446 | INFO     | [monitor] control thread has ended
[2026-03-06 19:37:28] 2026-03-06 18:36:57,535 | INFO     | all workflow threads have been joined
[2026-03-06 19:37:28] 2026-03-06 18:36:57,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 19:37:28] 2026-03-06 18:36:57,535 | INFO     | traces error code: 0
[2026-03-06 19:37:28] 2026-03-06 18:36:57,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 19:37:28] 2026-03-06 18:36:57,858 [wrapper] ==== pilot stdout END ====
[2026-03-06 19:37:28] 2026-03-06 18:36:57,864 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 19:37:28] 2026-03-06 18:36:57,868 [wrapper] pilotpid: 1869704
[2026-03-06 19:37:28] 2026-03-06 18:36:57,887 [wrapper] Pilot exit status: 0
[2026-03-06 19:37:28] 2026-03-06 18:36:57,980 [wrapper] pandaids: 7038637547
[2026-03-06 19:37:28] 2026-03-06 18:36:58,298 [wrapper] cleanup supervisor_pilot 2289972 1869705
[2026-03-06 19:37:28] 2026-03-06 18:36:58,313 [wrapper] Test setup, not cleaning
[2026-03-06 19:37:28] 2026-03-06 18:36:58,319 [wrapper] apfmon messages muted
[2026-03-06 19:37:28] 2026-03-06 18:36:58,324 [wrapper] ==== wrapper stdout END ====
[2026-03-06 19:37:28] 2026-03-06 18:36:58,347 [wrapper] ==== wrapper stderr END ====
[2026-03-06 19:37:28]  *** Error codes and diagnostics ***
[2026-03-06 19:37:28]     "exeErrorCode": 0,
[2026-03-06 19:37:28]     "exeErrorDiag": "",
[2026-03-06 19:37:28]     "pilotErrorCode": 0,
[2026-03-06 19:37:28]     "pilotErrorDiag": "",
[2026-03-06 19:37:28]  *** Listing of results directory ***
[2026-03-06 19:37:28] total 613284
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc    584627 Mar  5 15:54 pilot3.tar.gz
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc      5111 Mar  5 15:54 queuedata.json
[2026-03-06 19:37:28] -rwx------. 1 boinc boinc     36322 Mar  5 15:54 runpilot2-wrapper.sh
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc       100 Mar  6 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 19:37:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 15:47 run_atlas
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc       105 Mar  6 15:47 job.xml
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc 438775708 Mar  6 15:48 EVNT.46701403._000158.pool.root.1
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc      6690 Mar  6 15:48 init_data.xml
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:48 start_atlas.sh
[2026-03-06 19:37:28] drwxrwx--x. 2 boinc boinc      4096 Mar  6 15:48 shared
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc    597959 Mar  6 15:48 input.tar.gz
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc         0 Mar  6 15:48 boinc_lockfile
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc      2562 Mar  6 15:48 pandaJob.out
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc    998899 Mar  6 15:48 agis_schedconf.cvmfs.json
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc       442 Mar  6 15:48 workernode_map.json
[2026-03-06 19:37:28] drwx------. 5 boinc boinc      4096 Mar  6 15:48 pilot3
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc 180943004 Mar  6 19:35 HITS.48955006._007879.pool.root.1
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc       530 Mar  6 19:35 boinc_task_state.xml
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc      1028 Mar  6 19:35 memory_monitor_summary.json
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc   1521291 Mar  6 19:35 agis_ddmendpoints.agis.ALL.json
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc    408183 Mar  6 19:35 log.48955006._007879.job.log.tgz.1
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc      6356 Mar  6 19:35 heartbeat.json
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc        95 Mar  6 19:36 pilot_heartbeat.json
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc      4903 Mar  6 19:36 pilotlog.txt
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc   1768733 Mar  6 19:36 log.48955006._007879.job.log.1
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc       357 Mar  6 19:36 output.list
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc       620 Mar  6 19:36 runtime_log
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc   2191360 Mar  6 19:36 result.tar.gz
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc      9205 Mar  6 19:36 runtime_log.err
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc       666 Mar  6 19:36 CsKODmtGPI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmo6NLDmba6Hdm.diag
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc        27 Mar  6 19:37 wrapper_checkpoint.txt
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc      8192 Mar  6 19:37 boinc_mmap_file
[2026-03-06 19:37:28] -rw-r--r--. 1 boinc boinc     20865 Mar  6 19:37 stderr.txt
[2026-03-06 19:37:28] HITS file was successfully produced:
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc 180943004 Mar  6 19:35 shared/HITS.pool.root.1
[2026-03-06 19:37:28]  *** Contents of shared directory: ***
[2026-03-06 19:37:28] total 607944
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc 438775708 Mar  6 15:48 ATLAS.root_0
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc     15845 Mar  6 15:48 start_atlas.sh
[2026-03-06 19:37:28] -rw-r--r--. 2 boinc boinc    597959 Mar  6 15:48 input.tar.gz
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc 180943004 Mar  6 19:35 HITS.pool.root.1
[2026-03-06 19:37:28] -rw-------. 1 boinc boinc   2191360 Mar  6 19:36 result.tar.gz
19:37:29 (1865591): run_atlas exited; CPU time 51848.853068
19:37:29 (1865591): called boinc_finish(0)

</stderr_txt>
]]>

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