Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:53 (328932): wrapper (7.7.26015): starting
04:56:53 (328932): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 04:56:53] Arguments: --nthreads 4
[2026-03-07 04:56:53] Threads: 4
[2026-03-07 04:56:53] Checking for CVMFS
[2026-03-07 04:56:53] No cvmfs_config command found, will try listing directly
[2026-03-07 04:56:53] CVMFS is ok
[2026-03-07 04:56:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 04:56:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 04:56:53] Further information can be found at the LHC@home message board.
[2026-03-07 04:56:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 04:56:53] Checking for apptainer binary...
[2026-03-07 04:56:53] which: no apptainer in ((null))
[2026-03-07 04:56:53] apptainer is not installed, using version from CVMFS
[2026-03-07 04:56:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 04:56:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-07 04:56:53] apptainer works
[2026-03-07 04:56:53] Set ATHENA_PROC_NUMBER=4
[2026-03-07 04:56:53] Set ATHENA_CORE_NUMBER=4
[2026-03-07 04:56:53] Starting ATLAS job with PandaID=7038632345
[2026-03-07 04:56:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:20:21]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:20:21]  is_altstaged=None
[2026-03-07 06:20:21]  is_tar=False
[2026-03-07 06:20:21]  lfn=log.48955010._005915.job.log.tgz.1
[2026-03-07 06:20:21]  mtime=0
[2026-03-07 06:20:21]  protocol_id=None
[2026-03-07 06:20:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 06:20:21]  replicas=None
[2026-03-07 06:20:21]  scope=mc23_13p6TeV
[2026-03-07 06:20:21]  status=None
[2026-03-07 06:20:21]  status_code=0
[2026-03-07 06:20:21]  storage_token=
[2026-03-07 06:20:21]  surl=/var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/log.48955010._005915.job.log.tgz.1
[2026-03-07 06:20:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/ac/log.48955010._005915.job.log.tgz.1
[2026-03-07 06:20:21]  workdir=None
[2026-03-07 06:20:21] ]
[2026-03-07 06:20:21] 2026-03-07 05:19:20,075 | INFO     | transferring file log.48955010._005915.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/log.48955010._005915.job.log.tgz.1 to /var/lib/b
[2026-03-07 06:20:21] 2026-03-07 05:19:20,075 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/log.48955010._005915.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/1/lo
[2026-03-07 06:20:21] 2026-03-07 05:19:20,143 | INFO     | adding to output.list: log.48955010._005915.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/ac/log.48955010._005915.job.log.tg
[2026-03-07 06:20:21] 2026-03-07 05:19:20,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 06:20:21] 2026-03-07 05:19:20,144 | INFO     | summary of transferred files:
[2026-03-07 06:20:21] 2026-03-07 05:19:20,144 | INFO     |  -- lfn=log.48955010._005915.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 06:20:21] 2026-03-07 05:19:20,145 | INFO     | stage-out finished correctly
[2026-03-07 06:20:21] 2026-03-07 05:19:20,568 | INFO     | time since job start (4935s) is within the limit (349056.0s)
[2026-03-07 06:20:21] 2026-03-07 05:19:20,805 | WARNING  | process 348728 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 06:20:21] 2026-03-07 05:19:20,805 | INFO     | using path: /var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:20:21] 2026-03-07 05:19:20,905 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 06:20:21] 2026-03-07 05:19:20,998 | INFO     | job 7038632345 has state=finished
[2026-03-07 06:20:21] 2026-03-07 05:19:20,999 | INFO     | preparing for final server update for job 7038632345 in state='finished'
[2026-03-07 06:20:21] 2026-03-07 05:19:21,558 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,558 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/jobReport.json
[2026-03-07 06:20:21] 2026-03-07 05:19:21,560 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/1/workernode_map.json
[2026-03-07 06:20:21] 2026-03-07 05:19:21,560 | INFO     | this job has now completed (state=finished)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,560 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,560 | INFO     | log transfer has been attempted: DONE
[2026-03-07 06:20:21] 2026-03-07 05:19:21,568 | INFO     | job 7038632345 has finished - writing final server update
[2026-03-07 06:20:21] 2026-03-07 05:19:21,568 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_108252/.job.ad'
[2026-03-07 06:20:21] 2026-03-07 05:19:21,568 | INFO     | total number of processed events: 400 (read)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,586 | INFO     | using path: /var/lib/boinc/var/slot48/slots/1/PanDA_Pilot-7038632345/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,587 | INFO     | extracted standard info from prmon json
[2026-03-07 06:20:21] 2026-03-07 05:19:21,587 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 06:20:21] 2026-03-07 05:19:21,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 06:20:21] 2026-03-07 05:19:21,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 06:20:21] 2026-03-07 05:19:21,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 06:20:21] 2026-03-07 05:19:21,588 | INFO     | fitting pss+swap vs Time
[2026-03-07 06:20:21] 2026-03-07 05:19:21,588 | INFO     | sum of square deviations: 125630262.5
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | sum of deviations: -163800341.50000003
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | mean x: 1772858377.5
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | mean y: 2327582.743243243
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | intersect: 2313831211.6211653
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | chi2: 0.00019743718237426563
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | current memory leak: -1.30 B/s (using 74 data points, chi2=0.00)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | could have reported an average CPU frequency of 3543 MHz (6 samples)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | ..............................
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . Timing measurements:
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . get job = 0 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . initial setup = 4 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . payload setup = 4 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . stage-in = 0 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . payload execution = 4912 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . stage-out = 1 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,589 | INFO     | . log creation = 0 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,590 | INFO     | ..............................
[2026-03-07 06:20:21] 2026-03-07 05:19:21,629 | INFO     | number of running child processes to parent process 348728: 1
[2026-03-07 06:20:21] 2026-03-07 05:19:21,629 | INFO     | maximum number of monitored processes: 6
[2026-03-07 06:20:21] 2026-03-07 05:19:21,629 | INFO     | aborting job monitoring since job object (job id=7038632345) has expired
[2026-03-07 06:20:21] 2026-03-07 05:19:21,677 | INFO     | 
[2026-03-07 06:20:21] 2026-03-07 05:19:21,677 | INFO     | job summary report
[2026-03-07 06:20:21] 2026-03-07 05:19:21,677 | INFO     | --------------------------------------------------
[2026-03-07 06:20:21] 2026-03-07 05:19:21,677 | INFO     | PanDA job id: 7038632345
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | task id: 48955010
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | errors: (none)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | pilot state: finished 
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | transexitcode: 0
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | exeerrorcode: 0
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | exeerrordiag: 
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | exitcode: 0
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | exitmsg: OK
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | cpuconsumptiontime: 18199 s
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | nevents: 400
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | neventsw: 0
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | pid: 348728
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | pgrp: 348728
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | corecount: 4
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | event service: False
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | sizes: {0: 2295759, 11: 2295759, 4920: 2322209, 4921: 2322208, 4923: 2331284, 4924: 2331662}
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | --------------------------------------------------
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | 
[2026-03-07 06:20:21] 2026-03-07 05:19:21,678 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/1
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,740 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,740 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 06:20:21] 2026-03-07 05:19:21,740 | INFO     | job 7038632345 has completed (purged errors)
[2026-03-07 06:20:21] 2026-03-07 05:19:21,740 | INFO     | overall cleanup function is called
[2026-03-07 06:20:21] 2026-03-07 05:19:22,748 | INFO     | --- collectZombieJob: --- 10, [348728]
[2026-03-07 06:20:21] 2026-03-07 05:19:22,749 | INFO     | zombie collector waiting for pid 348728
[2026-03-07 06:20:21] 2026-03-07 05:19:22,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 06:20:21] 2026-03-07 05:19:22,749 | INFO     | collected zombie processes
[2026-03-07 06:20:21] 2026-03-07 05:19:22,749 | INFO     | will attempt to kill all subprocesses of pid=348728
[2026-03-07 06:20:21] 2026-03-07 05:19:23,467 | INFO     | process IDs to be killed: [348728] (in reverse order)
[2026-03-07 06:20:21] 2026-03-07 05:19:23,760 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 06:20:21] 2026-03-07 05:19:23,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 06:20:21] 2026-03-07 05:19:23,803 | INFO     | did not find any defunct processes belonging to 348728
[2026-03-07 06:20:21] 2026-03-07 05:19:23,837 | INFO     | did not find any defunct processes belonging to 348728
[2026-03-07 06:20:21] 2026-03-07 05:19:23,838 | INFO     | ready for new job
[2026-03-07 06:20:21] 2026-03-07 05:19:23,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 06:20:21] 2026-03-07 05:19:23,839 | INFO     | **************************************
[2026-03-07 06:20:21] 2026-03-07 05:19:23,839 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 06:20:21] 2026-03-07 05:19:23,839 | INFO     | **************************************
[2026-03-07 06:20:21] 2026-03-07 05:19:23,839 | INFO     | 
[2026-03-07 06:20:21] 2026-03-07 05:19:23,846 | INFO     | architecture information:
[2026-03-07 06:20:21] 2026-03-07 05:19:23,846 | INFO     | executing command: cat /etc/os-release
[2026-03-07 06:20:21] 2026-03-07 05:19:23,864 | INFO     | cat /etc/os-release:
[2026-03-07 06:20:21] NAME="CentOS Linux"
[2026-03-07 06:20:21] VERSION="7 (Core)"
[2026-03-07 06:20:21] ID="centos"
[2026-03-07 06:20:21] ID_LIKE="rhel fedora"
[2026-03-07 06:20:21] VERSION_ID="7"
[2026-03-07 06:20:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 06:20:21] ANSI_COLOR="0;31"
[2026-03-07 06:20:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 06:20:21] HOME_URL="https://www.centos.org/"
[2026-03-07 06:20:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 06:20:21] 
[2026-03-07 06:20:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 06:20:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 06:20:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 06:20:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 06:20:21] 
[2026-03-07 06:20:21] 2026-03-07 05:19:23,865 | INFO     | **************************************
[2026-03-07 06:20:21] 2026-03-07 05:19:24,367 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/1
[2026-03-07 06:20:21] 2026-03-07 05:19:24,387 | INFO     | sufficient remaining disk space (179581222912 B)
[2026-03-07 06:20:21] 2026-03-07 05:19:24,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 06:20:21] 2026-03-07 05:19:24,388 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 06:20:21] 2026-03-07 05:19:24,388 | INFO     | update_server=False
[2026-03-07 06:20:21] 2026-03-07 05:19:24,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 06:20:21] 2026-03-07 05:19:24,623 | INFO     | all data control threads have been joined
[2026-03-07 06:20:21] 2026-03-07 05:19:24,789 | INFO     | all payload control threads have been joined
[2026-03-07 06:20:21] 2026-03-07 05:19:25,092 | INFO     | all job control threads have been joined
[2026-03-07 06:20:21] 2026-03-07 05:19:25,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:20:21] 2026-03-07 05:19:25,137 | INFO     | aborting loop
[2026-03-07 06:20:21] 2026-03-07 05:19:25,393 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:25,590 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:25,591 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:25,628 | INFO     | [data] control thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:25,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:20:21] 2026-03-07 05:19:25,794 | INFO     | [payload] control thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:25,968 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,097 | INFO     | [job] control thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,142 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,303 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:20:21] 2026-03-07 05:19:26,787 | INFO     | [job] validate thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,948 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,991 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:26,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 06:20:21] 2026-03-07 05:19:27,698 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:27,730 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:30,999 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:20:21] 2026-03-07 05:19:54,473 | INFO     | PID=336152 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 06:20:21] 2026-03-07 05:19:54,474 | INFO     | .. there are 59 such processes running
[2026-03-07 06:20:21] 2026-03-07 05:19:54,475 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:20:21] 2026-03-07 05:19:54,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:20:21] 2026-03-07 05:19:54,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:20:21] 2026-03-07 05:20:13,523 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:20:21] 2026-03-07 05:20:15,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22845305759552)>', '<ExcThread(monitor, started 22844998153984)>']
[2026-03-07 06:20:21] 2026-03-07 05:20:15,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:20:21] 2026-03-07 05:20:15,581 | INFO     | [monitor] control thread has ended
[2026-03-07 06:20:21] 2026-03-07 05:20:20,427 | INFO     | all workflow threads have been joined
[2026-03-07 06:20:21] 2026-03-07 05:20:20,427 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:20:21] 2026-03-07 05:20:20,428 | INFO     | traces error code: 0
[2026-03-07 06:20:21] 2026-03-07 05:20:20,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:20:21] 2026-03-07 05:20:20,601 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:20:21] 2026-03-07 05:20:20,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:20:21] 2026-03-07 05:20:20,620 [wrapper] pilotpid: 336152
[2026-03-07 06:20:21] 2026-03-07 05:20:20,654 [wrapper] Pilot exit status: 0
[2026-03-07 06:20:21] 2026-03-07 05:20:20,708 [wrapper] pandaids: 7038632345
[2026-03-07 06:20:21] 2026-03-07 05:20:20,880 [wrapper] cleanup supervisor_pilot 1260691 336153
[2026-03-07 06:20:21] 2026-03-07 05:20:20,893 [wrapper] Test setup, not cleaning
[2026-03-07 06:20:21] 2026-03-07 05:20:20,921 [wrapper] apfmon messages muted
[2026-03-07 06:20:21] 2026-03-07 05:20:20,926 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:20:21] 2026-03-07 05:20:20,959 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:20:21]  *** Error codes and diagnostics ***
[2026-03-07 06:20:21]     "exeErrorCode": 0,
[2026-03-07 06:20:21]     "exeErrorDiag": "",
[2026-03-07 06:20:21]     "pilotErrorCode": 0,
[2026-03-07 06:20:21]     "pilotErrorDiag": "",
[2026-03-07 06:20:21]  *** Listing of results directory ***
[2026-03-07 06:20:21] total 616745
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc      5111 Mar  5 14:51 queuedata.json
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc    584627 Mar  5 14:51 pilot3.tar.gz
[2026-03-07 06:20:21] -rwx------. 1 boinc boinc     36322 Mar  5 14:51 runpilot2-wrapper.sh
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc       100 Mar  7 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:20:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 04:56 run_atlas
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc       105 Mar  7 04:56 job.xml
[2026-03-07 06:20:21] drwxrwx--x. 2 boinc boinc         5 Mar  7 04:56 shared
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc    597943 Mar  7 04:56 input.tar.gz
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc 442725077 Mar  7 04:56 EVNT.46701403._001119.pool.root.1
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:56 start_atlas.sh
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc         0 Mar  7 04:56 boinc_lockfile
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc      2560 Mar  7 04:56 pandaJob.out
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc    999155 Mar  7 04:57 agis_schedconf.cvmfs.json
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc   1521291 Mar  7 04:57 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc       444 Mar  7 04:57 workernode_map.json
[2026-03-07 06:20:21] drwx------. 5 boinc boinc        22 Mar  7 04:57 pilot3
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc      6708 Mar  7 05:57 init_data.xml
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc 186248714 Mar  7 06:18 HITS.48955010._005915.pool.root.1
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc       530 Mar  7 06:18 boinc_task_state.xml
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc      1044 Mar  7 06:19 memory_monitor_summary.json
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc    272639 Mar  7 06:19 log.48955010._005915.job.log.tgz.1
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc      6375 Mar  7 06:19 heartbeat.json
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc        95 Mar  7 06:19 pilot_heartbeat.json
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc        27 Mar  7 06:20 wrapper_checkpoint.txt
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc      8192 Mar  7 06:20 boinc_mmap_file
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc      4829 Mar  7 06:20 pilotlog.txt
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc    711927 Mar  7 06:20 log.48955010._005915.job.log.1
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc       357 Mar  7 06:20 output.list
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc       620 Mar  7 06:20 runtime_log
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc   1003520 Mar  7 06:20 result.tar.gz
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc       670 Mar  7 06:20 yKxKDm1HOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBwLLDmddN8Im.diag
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc      9204 Mar  7 06:20 runtime_log.err
[2026-03-07 06:20:21] -rw-r--r--. 1 boinc boinc     21392 Mar  7 06:20 stderr.txt
[2026-03-07 06:20:21] HITS file was successfully produced:
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc 186248714 Mar  7 06:18 shared/HITS.pool.root.1
[2026-03-07 06:20:21]  *** Contents of shared directory: ***
[2026-03-07 06:20:21] total 615287
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc    597943 Mar  7 04:56 input.tar.gz
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc 442725077 Mar  7 04:56 ATLAS.root_0
[2026-03-07 06:20:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 04:56 start_atlas.sh
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc 186248714 Mar  7 06:18 HITS.pool.root.1
[2026-03-07 06:20:21] -rw-------. 1 boinc boinc   1003520 Mar  7 06:20 result.tar.gz
06:20:23 (328932): run_atlas exited; CPU time 18425.356498
06:20:23 (328932): called boinc_finish(0)

</stderr_txt>
]]>

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