Name 4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm_0
Workunit 239605444
Created 5 Mar 2026, 13:53:14 UTC
Sent 5 Mar 2026, 17:19:07 UTC
Report deadline 13 Mar 2026, 17:19:07 UTC
Received 6 Mar 2026, 14:18:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11041768
Run time 1 hours 36 min 4 sec
CPU time 5 hours 33 min 54 sec
Priority 28
Validate state Valid
Credit 53.37
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.37 GB
Peak swap size 2.81 GB
Peak disk usage 1.43 GB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:24:44 (30119): wrapper (7.7.26015): starting
18:24:44 (30119): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 18:24:44] Arguments: --nthreads 4
[2026-03-05 18:24:44] Threads: 4
[2026-03-05 18:24:44] Checking for CVMFS
[2026-03-05 18:24:44] No cvmfs_config command found, will try listing directly
[2026-03-05 18:24:44] CVMFS is ok
[2026-03-05 18:24:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 18:24:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 18:24:44] Further information can be found at the LHC@home message board.
[2026-03-05 18:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 18:24:44] Checking for apptainer binary...
[2026-03-05 18:24:44] which: no apptainer in ((null))
[2026-03-05 18:24:44] apptainer is not installed, using version from CVMFS
[2026-03-05 18:24:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 18:24:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-05 18:24:45] apptainer works
[2026-03-05 18:24:45] Set ATHENA_PROC_NUMBER=4
[2026-03-05 18:24:45] Set ATHENA_CORE_NUMBER=4
[2026-03-05 18:24:45] Starting ATLAS job with PandaID=7038632116
[2026-03-05 18:24:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:40:29 (2294492): wrapper (7.7.26015): starting
20:40:29 (2294492): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 20:40:29] Arguments: --nthreads 4
[2026-03-05 20:40:29] Threads: 4
[2026-03-05 20:40:29] This job has been restarted, cleaning up previous attempt
[2026-03-05 20:40:29] Checking for CVMFS
[2026-03-05 20:40:29] No cvmfs_config command found, will try listing directly
[2026-03-05 20:40:29] CVMFS is ok
[2026-03-05 20:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 20:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 20:40:29] Further information can be found at the LHC@home message board.
[2026-03-05 20:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 20:40:29] Checking for apptainer binary...
[2026-03-05 20:40:29] which: no apptainer in ((null))
[2026-03-05 20:40:29] apptainer is not installed, using version from CVMFS
[2026-03-05 20:40:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 20:40:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-05 20:40:29] apptainer works
[2026-03-05 20:40:29] Set ATHENA_PROC_NUMBER=4
[2026-03-05 20:40:29] Set ATHENA_CORE_NUMBER=4
[2026-03-05 20:40:29] Starting ATLAS job with PandaID=7038632116
[2026-03-05 20:40:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 20:43:36] Job failed
[2026-03-05 20:43:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/0/
[2026-03-05 20:43:36] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/0/
[2026-03-05 20:43:36] + mv ATLAS.root_0 EVNT.46701403._000140.pool.root.1
[2026-03-05 20:43:36] mv: 'ATLAS.root_0' and 'EVNT.46701403._000140.pool.root.1' are the same file
[2026-03-05 20:43:36] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-05 20:43:36] + umask 077
[2026-03-05 20:43:36] ++ date +%s
[2026-03-05 20:43:36] + ACCOUNTING_STARTTIME=1772739629
[2026-03-05 20:43:36] + echo 'Detecting resource accounting method available for the job.'
[2026-03-05 20:43:36] Detecting resource accounting method available for the job.
[2026-03-05 20:43:36] + JOB_ACCOUNTING=
[2026-03-05 20:43:36] + command -v arc-job-cgroup
[2026-03-05 20:43:36] + '[' -z '' ']'
[2026-03-05 20:43:36] + GNU_TIME=/usr/bin/time
[2026-03-05 20:43:36] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-05 20:43:36] Looking for /usr/bin/time tool for accounting measurements
[2026-03-05 20:43:36] + '[' '!' -z /usr/bin/time ']'
[2026-03-05 20:43:36] + /usr/bin/time --version
[2026-03-05 20:43:36] + echo 'GNU time found and will be used for job accounting.'
[2026-03-05 20:43:36] GNU time found and will be used for job accounting.
[2026-03-05 20:43:36] + JOB_ACCOUNTING=gnutime
[2026-03-05 20:43:36] + '[' -z gnutime ']'
[2026-03-05 20:43:36] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-05 20:43:36] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-05 20:43:36] + export GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-05/BOINC_MCORE/7038632116.out
[2026-03-05 20:43:36] + GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-05/BOINC_MCORE/7038632116.out
[2026-03-05 20:43:36] + export PILOT_NOKILL=YES
[2026-03-05 20:43:36] + PILOT_NOKILL=YES
[2026-03-05 20:43:36] + export GRID_GLOBAL_JOBID=4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm
[2026-03-05 20:43:36] + GRID_GLOBAL_JOBID=4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm
[2026-03-05 20:43:36] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm
[2026-03-05 20:43:36] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm
[2026-03-05 20:43:36] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-05 20:43:36] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-05 20:43:36] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-05 20:43:36] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot48/slots/0
[2026-03-05 20:43:36] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot48/slots/0/log.48955006._006982.job.log.1
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot48/slots/0/log.48955006._006982.job.log.1
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/0.diag
[2026-03-05 20:43:36] + '[' '!' -z '' ']'
[2026-03-05 20:43:36] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-05 20:43:36] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-05 20:43:36] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-05 20:43:36] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-05 20:43:36] + '[' '!' -z '' ']'
[2026-03-05 20:43:36] + '[' -z yes ']'
[2026-03-05 20:43:36] ++ pwd
[2026-03-05 20:43:36] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/0/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag
[2026-03-05 20:43:36] + runtimeenvironments=
[2026-03-05 20:43:36] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-05 20:43:36] + RTE_function_0 1
[2026-03-05 20:43:36] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-05 20:43:36] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-05 20:43:36] + export BOINC_APP=ATLAS
[2026-03-05 20:43:36] + BOINC_APP=ATLAS
[2026-03-05 20:43:36] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-05 20:43:36] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-05 20:43:36] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-05 20:43:36] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-05 20:43:36] + '[' -z 1 ']'
[2026-03-05 20:43:36] + '[' 1 == 1 ']'
[2026-03-05 20:43:36] + shift
[2026-03-05 20:43:36] + export SITE_NAME=BOINC
[2026-03-05 20:43:36] + SITE_NAME=BOINC
[2026-03-05 20:43:36] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/0/
[2026-03-05 20:43:36] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/0/
[2026-03-05 20:43:36] + '[' -e /var/lib/boinc/var/slot48/slots/0/init_data.xml ']'
[2026-03-05 20:43:36] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot48/slots/0/init_data.xml
[2026-03-05 20:43:36] + '[' 0 -ne 0 ']'
[2026-03-05 20:43:36] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-05 20:43:36] + '[' -f /etc/os-release ']'
[2026-03-05 20:43:36] +++ cat /etc/os-release
[2026-03-05 20:43:36] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-05 20:43:36] +++ NAME='CentOS Linux'
[2026-03-05 20:43:36] +++ VERSION='7 (Core)'
[2026-03-05 20:43:36] +++ ID=centos
[2026-03-05 20:43:36] +++ ID_LIKE='rhel fedora'
[2026-03-05 20:43:36] +++ VERSION_ID=7
[2026-03-05 20:43:36] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-05 20:43:36] +++ ANSI_COLOR='0;31'
[2026-03-05 20:43:36] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-05 20:43:36] +++ HOME_URL=https://www.centos.org/
[2026-03-05 20:43:36] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-05 20:43:36] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-05 20:43:36] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-05 20:43:36] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-05 20:43:36] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-05 20:43:36] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-05 20:43:36] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-05 20:43:36] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-05 20:43:36] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-05 20:43:36] + HOME=/var/lib/boinc/var/slot48/slots/0
[2026-03-05 20:43:36] + export HOME
[2026-03-05 20:43:36] + cd /var/lib/boinc/var/slot48/slots/0
[2026-03-05 20:43:36] + '[' '!' -z '' ']'
[2026-03-05 20:43:36] + '[' -z '' ']'
[2026-03-05 20:43:36] ++ /bin/hostname -f
[2026-03-05 20:43:36] + nodename=skurut18.grid.cesnet.cz
[2026-03-05 20:43:36] + echo nodename=skurut18.grid.cesnet.cz
[2026-03-05 20:43:36] + echo Processors=2
[2026-03-05 20:43:36] + echo Nodecount=1
[2026-03-05 20:43:36] + echo Benchmark=HEPSPEC:1.0
[2026-03-05 20:43:36] + executable=./runpilot2-wrapper.sh
[2026-03-05 20:43:36] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-05 20:43:36] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-05 20:43:36] ++ head -n 1
[2026-03-05 20:43:36] ++ tr -d '\0'
[2026-03-05 20:43:36] + line1='#!/bin/bash'
[2026-03-05 20:43:36] ++ echo '#!/bin/bash'
[2026-03-05 20:43:36] ++ sed -n 's/^#! *//p'
[2026-03-05 20:43:36] + shebang=/bin/bash
[2026-03-05 20:43:36] ++ echo /bin/bash
[2026-03-05 20:43:36] ++ awk '{print $1}'
[2026-03-05 20:43:36] + interpreter=/bin/bash
[2026-03-05 20:43:36] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-05 20:43:36] + '[' x/bin/bash = x ']'
[2026-03-05 20:43:36] + type /bin/bash
[2026-03-05 20:43:36] + '[' xgnutime = xgnutime ']'
[2026-03-05 20:43:36] + /usr/bin/time -o /var/lib/boinc/var/slot48/slots/0/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-05 20:43:36] + RESULT=2
[2026-03-05 20:43:36] + sed -i -e /nodename=/d /var/lib/boinc/var/slot48/slots/0/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag
[2026-03-05 20:43:36] ++ grep domain_name init_data.xml
[2026-03-05 20:43:36] ++ awk -F '>' '{print $2}'
[2026-03-05 20:43:36] ++ sed -e 's# #_#g'
[2026-03-05 20:43:36] ++ awk -F '<' '{print $1}'
[2026-03-05 20:43:36] + hostname=skurut18.grid.cesnet.cz
[2026-03-05 20:43:36] ++ grep user_name init_data.xml
[2026-03-05 20:43:36] ++ awk -F '>' '{print $2}'
[2026-03-05 20:43:36] ++ awk -F '<' '{print $1}'
[2026-03-05 20:43:36] ++ sed -e 's# #_#g'
[2026-03-05 20:43:36] + username=praguelcg2
[2026-03-05 20:43:36] + nodename=praguelcg2@skurut18.grid.cesnet.cz
[2026-03-05 20:43:36] + echo nodename=praguelcg2@skurut18.grid.cesnet.cz
[2026-03-05 20:43:36] + '[' -n 4 ']'
[2026-03-05 20:43:36] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot48/slots/0/4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag
[2026-03-05 20:43:36] + echo exitcode=2
[2026-03-05 20:43:36] + runtimeenvironments=
[2026-03-05 20:43:36] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-05 20:43:36] + RTE_function_0 2
[2026-03-05 20:43:36] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-05 20:43:36] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-05 20:43:36] + export BOINC_APP=ATLAS
[2026-03-05 20:43:36] + BOINC_APP=ATLAS
[2026-03-05 20:43:36] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-05 20:43:36] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-05 20:43:36] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-05 20:43:36] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-05 20:43:36] + '[' -z 2 ']'
[2026-03-05 20:43:36] + '[' 2 == 1 ']'
[2026-03-05 20:43:36] + '[' 0 -ne 0 ']'
[2026-03-05 20:43:36] + echo 'zip all output files'
[2026-03-05 20:43:36] + flist='*.diag '
[2026-03-05 20:43:36] + for f in ./heartbeat.json ./output.list ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1 ./gmlog/
[2026-03-05 20:43:36] + '[' -e ./heartbeat.json ']'
[2026-03-05 20:43:36] + flist='*.diag  ./heartbeat.json'
[2026-03-05 20:43:36] + for f in ./heartbeat.json ./output.list ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1 ./gmlog/
[2026-03-05 20:43:36] + '[' -e ./output.list ']'
[2026-03-05 20:43:36] + for f in ./heartbeat.json ./output.list ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1 ./gmlog/
[2026-03-05 20:43:36] + '[' -e ./log.48955006._006982.job.log.1 ']'
[2026-03-05 20:43:36] + flist='*.diag  ./heartbeat.json ./log.48955006._006982.job.log.1'
[2026-03-05 20:43:36] + for f in ./heartbeat.json ./output.list ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1 ./gmlog/
[2026-03-05 20:43:36] + '[' -e ./log.48955006._006982.job.log.1 ']'
[2026-03-05 20:43:36] + flist='*.diag  ./heartbeat.json ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1'
[2026-03-05 20:43:36] + for f in ./heartbeat.json ./output.list ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1 ./gmlog/
[2026-03-05 20:43:36] + '[' -e ./gmlog/ ']'
[2026-03-05 20:43:36] + '[' -f output.list ']'
[2026-03-05 20:43:36] + tar cvf result.tar.gz 4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag ./heartbeat.json ./log.48955006._006982.job.log.1 ./log.48955006._006982.job.log.1
[2026-03-05 20:43:36] + '[' xgnutime = xcgroup ']'
[2026-03-05 20:43:36] + '[' -n '' ']'
[2026-03-05 20:43:36] + '[' -n '' ']'
[2026-03-05 20:43:36] ++ date +%s
[2026-03-05 20:43:36] + ACCOUNTING_ENDTIME=1772739816
[2026-03-05 20:43:36] ++ date -d '1970-01-01 UTC 1772739629 seconds' +%Y%m%d%H%M%SZ
[2026-03-05 20:43:36] + echo LRMSStartTime=20260305204029Z
[2026-03-05 20:43:36] ++ date -d '1970-01-01 UTC 1772739816 seconds' +%Y%m%d%H%M%SZ
[2026-03-05 20:43:36] + echo LRMSEndTime=20260305204336Z
[2026-03-05 20:43:36] + echo walltime=187
[2026-03-05 20:43:36] + echo exitcode=2
[2026-03-05 20:43:36] + exit 2
[2026-03-05 20:43:36] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-05 20:43:36] ./pilot3/pilot/util/realtimelogger.py
[2026-03-05 20:43:36] ./pilot3/pilot/util/loggingsupport.py
[2026-03-05 20:43:36] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-05 20:43:36] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-05 20:43:36] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-05 20:43:36] ./log.48955006._006982.job.log.1
[2026-03-05 20:43:36] ./runtime_log
[2026-03-05 20:43:36] ./PanDA_Pilot-7038632116/log.EVNTtoHITS
[2026-03-05 20:43:36] ./PanDA_Pilot-7038632116/PoolFileCatalog.xml
[2026-03-05 20:43:36] ./PanDA_Pilot-7038632116/pilotlog.txt
[2026-03-05 20:43:36] ./PanDA_Pilot-7038632116/prmon.log
[2026-03-05 20:43:36] ./pilotlog.txt
[2026-03-05 20:43:36] ./runtime_log.err
21:10:29 (3212405): wrapper (7.7.26015): starting
21:10:29 (3212405): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 21:10:29] Arguments: --nthreads 4
[2026-03-05 21:10:29] Threads: 4
[2026-03-05 21:10:29] This job has been restarted, cleaning up previous attempt
[2026-03-05 21:10:29] Checking for CVMFS
[2026-03-05 21:10:29] No cvmfs_config command found, will try listing directly
[2026-03-05 21:10:29] CVMFS is ok
[2026-03-05 21:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 21:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 21:10:29] Further information can be found at the LHC@home message board.
[2026-03-05 21:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 21:10:29] Checking for apptainer binary...
[2026-03-05 21:10:29] which: no apptainer in ((null))
[2026-03-05 21:10:29] apptainer is not installed, using version from CVMFS
[2026-03-05 21:10:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 21:10:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-05 21:10:29] apptainer works
[2026-03-05 21:10:29] Set ATHENA_PROC_NUMBER=4
[2026-03-05 21:10:29] Set ATHENA_CORE_NUMBER=4
[2026-03-05 21:10:29] Starting ATLAS job with PandaID=7038632116
[2026-03-05 21:10:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 22:36:51]  *** The last 200 lines of the pilot log: ***
[2026-03-05 22:36:51]  direct_access_wan=False
[2026-03-05 22:36:51]  domain=
[2026-03-05 22:36:51]  filesize=295953
[2026-03-05 22:36:51]  filetype=log
[2026-03-05 22:36:51]  guid=44a52271-5764-46a2-baa3-bf71c343a1c4
[2026-03-05 22:36:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 22:36:51]  is_altstaged=None
[2026-03-05 22:36:51]  is_tar=False
[2026-03-05 22:36:51]  lfn=log.48955006._006982.job.log.tgz.1
[2026-03-05 22:36:51]  mtime=0
[2026-03-05 22:36:51]  protocol_id=None
[2026-03-05 22:36:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 22:36:51]  replicas=None
[2026-03-05 22:36:51]  scope=mc23_13p6TeV
[2026-03-05 22:36:51]  status=None
[2026-03-05 22:36:51]  status_code=0
[2026-03-05 22:36:51]  storage_token=
[2026-03-05 22:36:51]  surl=/var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7038632116/log.48955006._006982.job.log.tgz.1
[2026-03-05 22:36:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/56/log.48955006._006982.job.log.tgz.1
[2026-03-05 22:36:51]  workdir=None
[2026-03-05 22:36:51] ]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,102 | INFO     | transferring file log.48955006._006982.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7038632116/log.48955006._006982.job.log.tgz.1 to /var/lib/b
[2026-03-05 22:36:51] 2026-03-05 21:35:46,102 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7038632116/log.48955006._006982.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/0/lo
[2026-03-05 22:36:51] 2026-03-05 21:35:46,119 | INFO     | adding to output.list: log.48955006._006982.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/56/log.48955006._006982.job.log.tg
[2026-03-05 22:36:51] 2026-03-05 21:35:46,120 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 22:36:51] 2026-03-05 21:35:46,120 | INFO     | summary of transferred files:
[2026-03-05 22:36:51] 2026-03-05 21:35:46,120 | INFO     |  -- lfn=log.48955006._006982.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 22:36:51] 2026-03-05 21:35:46,120 | INFO     | stage-out finished correctly
[2026-03-05 22:36:51] 2026-03-05 21:35:46,153 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 22:36:51] 2026-03-05 21:35:46,201 | INFO     | job 7038632116 has state=finished
[2026-03-05 22:36:51] 2026-03-05 21:35:46,202 | INFO     | preparing for final server update for job 7038632116 in state='finished'
[2026-03-05 22:36:51] 2026-03-05 21:35:46,202 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7038632116/jobReport.json
[2026-03-05 22:36:51] 2026-03-05 21:35:46,204 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/0/workernode_map.json
[2026-03-05 22:36:51] 2026-03-05 21:35:46,204 | INFO     | this job has now completed (state=finished)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,204 | INFO     | log transfer has been attempted: DONE
[2026-03-05 22:36:51] 2026-03-05 21:35:46,204 | INFO     | job 7038632116 has finished - writing final server update
[2026-03-05 22:36:51] 2026-03-05 21:35:46,205 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3040186/.job.ad'
[2026-03-05 22:36:51] 2026-03-05 21:35:46,205 | INFO     | total number of processed events: 400 (read)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,224 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7038632116/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,225 | INFO     | extracted standard info from prmon json
[2026-03-05 22:36:51] 2026-03-05 21:35:46,225 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 22:36:51] 2026-03-05 21:35:46,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 22:36:51] 2026-03-05 21:35:46,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 22:36:51] 2026-03-05 21:35:46,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | fitting pss+swap vs Time
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | sum of square deviations: 141539398.0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | sum of deviations: 742336938.0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | mean x: 1772744081.0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | mean y: 2320554.350649351
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | intersect: -9295256173.700462
[2026-03-05 22:36:51] 2026-03-05 21:35:46,227 | INFO     | chi2: 0.0003404475968086716
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | current memory leak: 5.24 B/s (using 77 data points, chi2=0.00)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | could have reported an average CPU frequency of 4341 MHz (6 samples)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | ..............................
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . Timing measurements:
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . get job = 0 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . initial setup = 0 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . payload setup = 5 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . stage-in = 0 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . payload execution = 5087 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . stage-out = 0 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | . log creation = 0 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,228 | INFO     | ..............................
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | 
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | job summary report
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | --------------------------------------------------
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | PanDA job id: 7038632116
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | task id: 48955006
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | errors: (none)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | pilot state: finished 
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | transexitcode: 0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | exeerrorcode: 0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | exeerrordiag: 
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | exitcode: 0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | exitmsg: OK
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | cpuconsumptiontime: 18468 s
[2026-03-05 22:36:51] 2026-03-05 21:35:46,282 | INFO     | nevents: 400
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | neventsw: 0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | pid: 3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | pgrp: 3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | corecount: 4
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | event service: False
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | sizes: {0: 2295550, 1: 2295812, 11: 2295840, 5096: 2322527, 5098: 2331741}
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | --------------------------------------------------
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | 
[2026-03-05 22:36:51] 2026-03-05 21:35:46,283 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | job 7038632116 has completed (purged errors)
[2026-03-05 22:36:51] 2026-03-05 21:35:46,305 | INFO     | overall cleanup function is called
[2026-03-05 22:36:51] 2026-03-05 21:35:47,312 | INFO     | --- collectZombieJob: --- 10, [3246866]
[2026-03-05 22:36:51] 2026-03-05 21:35:47,313 | INFO     | zombie collector waiting for pid 3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:47,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 22:36:51] 2026-03-05 21:35:47,313 | INFO     | collected zombie processes
[2026-03-05 22:36:51] 2026-03-05 21:35:47,313 | INFO     | will attempt to kill all subprocesses of pid=3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:47,840 | INFO     | process IDs to be killed: [3246866] (in reverse order)
[2026-03-05 22:36:51] 2026-03-05 21:35:48,098 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 22:36:51] 2026-03-05 21:35:48,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 22:36:51] 2026-03-05 21:35:48,135 | INFO     | did not find any defunct processes belonging to 3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:48,169 | INFO     | did not find any defunct processes belonging to 3246866
[2026-03-05 22:36:51] 2026-03-05 21:35:48,170 | INFO     | ready for new job
[2026-03-05 22:36:51] 2026-03-05 21:35:48,170 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 22:36:51] 2026-03-05 21:35:48,171 | INFO     | **************************************
[2026-03-05 22:36:51] 2026-03-05 21:35:48,171 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 22:36:51] 2026-03-05 21:35:48,171 | INFO     | **************************************
[2026-03-05 22:36:51] 2026-03-05 21:35:48,171 | INFO     | 
[2026-03-05 22:36:51] 2026-03-05 21:35:48,178 | INFO     | architecture information:
[2026-03-05 22:36:51] 2026-03-05 21:35:48,178 | INFO     | executing command: cat /etc/os-release
[2026-03-05 22:36:51] 2026-03-05 21:35:48,192 | INFO     | cat /etc/os-release:
[2026-03-05 22:36:51] NAME="CentOS Linux"
[2026-03-05 22:36:51] VERSION="7 (Core)"
[2026-03-05 22:36:51] ID="centos"
[2026-03-05 22:36:51] ID_LIKE="rhel fedora"
[2026-03-05 22:36:51] VERSION_ID="7"
[2026-03-05 22:36:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 22:36:51] ANSI_COLOR="0;31"
[2026-03-05 22:36:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 22:36:51] HOME_URL="https://www.centos.org/"
[2026-03-05 22:36:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 22:36:51] 
[2026-03-05 22:36:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 22:36:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 22:36:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 22:36:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 22:36:51] 
[2026-03-05 22:36:51] 2026-03-05 21:35:48,193 | INFO     | **************************************
[2026-03-05 22:36:51] 2026-03-05 21:35:48,695 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-05 22:36:51] 2026-03-05 21:35:48,712 | INFO     | sufficient remaining disk space (325760057344 B)
[2026-03-05 22:36:51] 2026-03-05 21:35:48,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 22:36:51] 2026-03-05 21:35:48,713 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 22:36:51] 2026-03-05 21:35:48,713 | INFO     | update_server=False
[2026-03-05 22:36:51] 2026-03-05 21:35:48,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 22:36:51] 2026-03-05 21:35:48,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:36:51] 2026-03-05 21:35:48,713 | INFO     | aborting loop
[2026-03-05 22:36:51] 2026-03-05 21:35:49,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 22:36:51] 2026-03-05 21:35:49,415 | INFO     | all job control threads have been joined
[2026-03-05 22:36:51] 2026-03-05 21:35:49,695 | INFO     | all data control threads have been joined
[2026-03-05 22:36:51] 2026-03-05 21:35:49,717 | INFO     | [job] retrieve thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:49,718 | INFO     | [job] job monitor thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:49,812 | INFO     | job.realtimelogging is not enabled
[2026-03-05 22:36:51] 2026-03-05 21:35:49,987 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,025 | INFO     | all payload control threads have been joined
[2026-03-05 22:36:51] 2026-03-05 21:35:50,298 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,365 | INFO     | [payload] validate_post thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,420 | INFO     | [job] control thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,519 | INFO     | [data] copytool_in thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,680 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,700 | INFO     | [data] control thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,938 | INFO     | [job] validate thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:50,997 | INFO     | [payload] failed_post thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:51,030 | INFO     | [payload] control thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:51,166 | INFO     | [data] copytool_out thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:51,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:36:51] 2026-03-05 21:35:52,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 22:36:51] 2026-03-05 21:35:52,296 | INFO     | [job] queue monitor thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:35:56,212 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 22:36:51] 2026-03-05 21:36:19,451 | INFO     | PID=3217862 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 22:36:51] 2026-03-05 21:36:19,452 | INFO     | .. there are 53 such processes running
[2026-03-05 22:36:51] 2026-03-05 21:36:19,452 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 22:36:51] 2026-03-05 21:36:19,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 22:36:51] 2026-03-05 21:36:19,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 22:36:51] 2026-03-05 21:36:45,464 | INFO     | [monitor] cgroup control has ended
[2026-03-05 22:36:51] 2026-03-05 21:36:45,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23087099418432)>', '<ExcThread(monitor, started 23086864017152)>']
[2026-03-05 22:36:51] 2026-03-05 21:36:46,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 22:36:51] 2026-03-05 21:36:46,607 | INFO     | [monitor] control thread has ended
[2026-03-05 22:36:51] 2026-03-05 21:36:50,785 | INFO     | all workflow threads have been joined
[2026-03-05 22:36:51] 2026-03-05 21:36:50,785 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 22:36:51] 2026-03-05 21:36:50,786 | INFO     | traces error code: 0
[2026-03-05 22:36:51] 2026-03-05 21:36:50,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 22:36:51] 2026-03-05 21:36:51,022 [wrapper] ==== pilot stdout END ====
[2026-03-05 22:36:51] 2026-03-05 21:36:51,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 22:36:51] 2026-03-05 21:36:51,032 [wrapper] pilotpid: 3217862
[2026-03-05 22:36:51] 2026-03-05 21:36:51,035 [wrapper] Pilot exit status: 0
[2026-03-05 22:36:51] 2026-03-05 21:36:51,044 [wrapper] pandaids: 7038632116 7038632116 7038632116
[2026-03-05 22:36:51] 2026-03-05 21:36:51,194 [wrapper] cleanup supervisor_pilot 3968280 3217863
[2026-03-05 22:36:51] 2026-03-05 21:36:51,199 [wrapper] Test setup, not cleaning
[2026-03-05 22:36:51] 2026-03-05 21:36:51,203 [wrapper] apfmon messages muted
[2026-03-05 22:36:51] 2026-03-05 21:36:51,205 [wrapper] ==== wrapper stdout END ====
[2026-03-05 22:36:51] 2026-03-05 21:36:51,208 [wrapper] ==== wrapper stderr END ====
[2026-03-05 22:36:51]  *** Error codes and diagnostics ***
[2026-03-05 22:36:51]     "exeErrorCode": 0,
[2026-03-05 22:36:51]     "exeErrorDiag": "",
[2026-03-05 22:36:51]     "pilotErrorCode": 0,
[2026-03-05 22:36:51]     "pilotErrorDiag": "",
[2026-03-05 22:36:51]  *** Listing of results directory ***
[2026-03-05 22:36:51] total 1047422
[2026-03-05 22:36:51] drwx------. 5 boinc boinc        22 Feb  2 16:00 pilot3
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc      5111 Mar  5 14:51 queuedata.json
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc    584627 Mar  5 14:51 pilot3.tar.gz
[2026-03-05 22:36:51] -rwx------. 1 boinc boinc     36322 Mar  5 14:51 runpilot2-wrapper.sh
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc       100 Mar  5 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 22:36:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 18:23 run_atlas
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc       105 Mar  5 18:23 job.xml
[2026-03-05 22:36:51] -rw-r--r--. 3 boinc boinc 442202964 Mar  5 18:24 EVNT.46701403._000140.pool.root.1
[2026-03-05 22:36:51] -rw-r--r--. 3 boinc boinc 442202964 Mar  5 18:24 ATLAS.root_0
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc     15845 Mar  5 18:24 start_atlas.sh
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc    597951 Mar  5 18:24 input.tar.gz
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc         0 Mar  5 18:24 boinc_lockfile
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc         0 Mar  5 20:40 wrapper_sigint_2299063
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc         0 Mar  5 20:43 wrapper_sigkill_2299063
[2026-03-05 22:36:51] drwxrwx--x. 2 boinc boinc         6 Mar  5 20:43 shared
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc      6706 Mar  5 21:10 init_data.xml
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc      2562 Mar  5 21:10 pandaJob.out
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc    998528 Mar  5 21:10 agis_schedconf.cvmfs.json
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc       444 Mar  5 21:10 workernode_map.json
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc 184907082 Mar  5 22:35 HITS.48955006._006982.pool.root.1
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc       530 Mar  5 22:35 boinc_task_state.xml
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc      1046 Mar  5 22:35 memory_monitor_summary.json
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc   1521291 Mar  5 22:35 agis_ddmendpoints.agis.ALL.json
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc    295953 Mar  5 22:35 log.48955006._006982.job.log.tgz.1
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc      6379 Mar  5 22:35 heartbeat.json
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc        97 Mar  5 22:36 pilot_heartbeat.json
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc      8192 Mar  5 22:36 boinc_mmap_file
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc        27 Mar  5 22:36 wrapper_checkpoint.txt
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc      4902 Mar  5 22:36 pilotlog.txt
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc    729483 Mar  5 22:36 log.48955006._006982.job.log.1
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc       357 Mar  5 22:36 output.list
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc       620 Mar  5 22:36 runtime_log
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc   1044480 Mar  5 22:36 result.tar.gz
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc      9281 Mar  5 22:36 runtime_log.err
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc      1400 Mar  5 22:36 4spNDmqHOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uLLDmG3H4Nm.diag
[2026-03-05 22:36:51] -rw-r--r--. 1 boinc boinc     38299 Mar  5 22:36 stderr.txt
[2026-03-05 22:36:51] HITS file was successfully produced:
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc 184907082 Mar  5 22:35 shared/HITS.pool.root.1
[2026-03-05 22:36:51]  *** Contents of shared directory: ***
[2026-03-05 22:36:51] total 613799
[2026-03-05 22:36:51] -rw-r--r--. 3 boinc boinc 442202964 Mar  5 18:24 ATLAS.root_0
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc     15845 Mar  5 18:24 start_atlas.sh
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc    597951 Mar  5 18:24 input.tar.gz
[2026-03-05 22:36:51] -rw-------. 1 boinc boinc 184907082 Mar  5 22:35 HITS.pool.root.1
[2026-03-05 22:36:51] -rw-r--r--. 2 boinc boinc   1044480 Mar  5 22:36 result.tar.gz
22:36:52 (3212405): run_atlas exited; CPU time 18742.439230
22:36:52 (3212405): called boinc_finish(0)

</stderr_txt>
]]>


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