Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:01 (2335231): wrapper (7.7.26015): starting
01:26:01 (2335231): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 01:26:01] Arguments: --nthreads 4
[2026-03-06 01:26:01] Threads: 4
[2026-03-06 01:26:01] Checking for CVMFS
[2026-03-06 01:26:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 01:26:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 01:26:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 01:26:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 01:26:02] 2.9.2.0 141980 12054 103916 156938 1 49 28697456 36864001 0 130560 0 6060535 99.986 454834 11490 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-06 01:26:02] CVMFS is ok
[2026-03-06 01:26:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 01:26:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 01:26:02] Further information can be found at the LHC@home message board.
[2026-03-06 01:26:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 01:26:02] Checking for apptainer binary...
[2026-03-06 01:26:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 01:26:02] Running /usr/bin/apptainer --version
[2026-03-06 01:26:02] apptainer version 1.4.1-1.1
[2026-03-06 01:26:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 01:26:02] magicA244a
[2026-03-06 01:26:02] apptainer works
[2026-03-06 01:26:02] Set ATHENA_PROC_NUMBER=4
[2026-03-06 01:26:02] Set ATHENA_CORE_NUMBER=4
[2026-03-06 01:26:02] Starting ATLAS job with PandaID=7038587994
[2026-03-06 01:26:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 02:24:40]  *** The last 200 lines of the pilot log: ***
[2026-03-06 02:24:40] 2026-03-06 01:24:08,724 | INFO     | executing command: cat /etc/os-release
[2026-03-06 02:24:40] 2026-03-06 01:24:08,735 | INFO     | cat /etc/os-release:
[2026-03-06 02:24:40] NAME="CentOS Linux"
[2026-03-06 02:24:40] VERSION="7 (Core)"
[2026-03-06 02:24:40] ID="centos"
[2026-03-06 02:24:40] ID_LIKE="rhel fedora"
[2026-03-06 02:24:40] VERSION_ID="7"
[2026-03-06 02:24:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 02:24:40] ANSI_COLOR="0;31"
[2026-03-06 02:24:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 02:24:40] HOME_URL="https://www.centos.org/"
[2026-03-06 02:24:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 02:24:40] 
[2026-03-06 02:24:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 02:24:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 02:24:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 02:24:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 02:24:40] 
[2026-03-06 02:24:40] 2026-03-06 01:24:08,735 | INFO     | **************************************
[2026-03-06 02:24:40] 2026-03-06 01:24:09,238 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | INFO     | sufficient remaining disk space (328227356672 B)
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | INFO     | update_server=False
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 02:24:40] 2026-03-06 01:24:09,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 02:24:40] 2026-03-06 01:24:09,578 | INFO     | all data control threads have been joined
[2026-03-06 02:24:40] 2026-03-06 01:24:09,678 | INFO     | all payload control threads have been joined
[2026-03-06 02:24:40] 2026-03-06 01:24:09,757 | WARNING  | process 2343827 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 02:24:40] 2026-03-06 01:24:09,785 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 02:24:40] 2026-03-06 01:24:09,794 | INFO     | all job control threads have been joined
[2026-03-06 02:24:40] 2026-03-06 01:24:09,822 | INFO     | number of running child processes to parent process 2343827: 1
[2026-03-06 02:24:40] 2026-03-06 01:24:09,822 | INFO     | maximum number of monitored processes: 6
[2026-03-06 02:24:40] 2026-03-06 01:24:09,822 | INFO     | aborting job monitoring since job object (job id=7038587994) has expired
[2026-03-06 02:24:40] 2026-03-06 01:24:09,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 02:24:40] 2026-03-06 01:24:09,822 | INFO     | will abort loop
[2026-03-06 02:24:40] 2026-03-06 01:24:10,259 | INFO     | [job] retrieve thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,259 | INFO     | [job] queue monitor thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,344 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,584 | INFO     | [data] control thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,612 | INFO     | [payload] failed_post thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,680 | INFO     | [payload] control thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,800 | INFO     | [job] control thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,827 | INFO     | [job] job monitor thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:10,968 | INFO     | [job] validate thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:11,116 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:11,139 | INFO     | [payload] validate_post thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:11,180 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:11,236 | INFO     | [data] copytool_in thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:11,259 | INFO     | [data] copytool_out thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:12,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 02:24:40] 2026-03-06 01:24:16,676 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:17,275 | INFO     | [monitor] cgroup control has ended
[2026-03-06 02:24:40] 2026-03-06 01:24:19,699 | INFO     | job.realtimelogging is not enabled
[2026-03-06 02:24:40] 2026-03-06 01:24:20,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 02:24:40] 2026-03-06 01:24:21,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640090113856)>', '<ExcThread(monitor, started 139639738308352)>']
[2026-03-06 02:24:40] 2026-03-06 01:24:26,652 | INFO     | all workflow threads have been joined
[2026-03-06 02:24:40] 2026-03-06 01:24:26,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 02:24:40] 2026-03-06 01:24:26,652 | INFO     | traces error code: 0
[2026-03-06 02:24:40] 2026-03-06 01:24:26,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 02:24:40] 2026-03-06 01:24:40,372 | INFO     | PID=2339332 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 02:24:40] 2026-03-06 01:24:40,373 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 02:24:40] 2026-03-06 01:24:40,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 02:24:40] 2026-03-06 01:24:40,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 02:24:40] 2026-03-06 01:24:40,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 02:24:40] 2026-03-06 01:24:40,373 | INFO     | [monitor] control thread has ended
[2026-03-06 02:24:40] 2026-03-06 01:24:40,423 [wrapper] ==== pilot stdout END ====
[2026-03-06 02:24:40] 2026-03-06 01:24:40,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 02:24:40] 2026-03-06 01:24:40,429 [wrapper] pilotpid: 2339332
[2026-03-06 02:24:40] 2026-03-06 01:24:40,432 [wrapper] Pilot exit status: 0
[2026-03-06 02:24:40] 2026-03-06 01:24:40,440 [wrapper] pandaids: 7038587994
[2026-03-06 02:24:40] 2026-03-06 01:24:40,457 [wrapper] cleanup supervisor_pilot 2348763 2339333
[2026-03-06 02:24:40] 2026-03-06 01:24:40,460 [wrapper] Test setup, not cleaning
[2026-03-06 02:24:40] 2026-03-06 01:24:40,462 [wrapper] apfmon messages muted
[2026-03-06 02:24:40] 2026-03-06 01:24:40,465 [wrapper] ==== wrapper stdout END ====
[2026-03-06 02:24:40] 2026-03-06 01:24:40,467 [wrapper] ==== wrapper stderr END ====
[2026-03-06 02:24:40]  *** Error codes and diagnostics ***
[2026-03-06 02:24:40]     "exeErrorCode": 0,
[2026-03-06 02:24:40]     "exeErrorDiag": "",
[2026-03-06 02:24:40]     "pilotErrorCode": 0,
[2026-03-06 02:24:40]     "pilotErrorDiag": "",
[2026-03-06 02:24:40]  *** Listing of results directory ***
[2026-03-06 02:24:40] total 615704
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc    584627 Mar  5 10:52 pilot3.tar.gz
[2026-03-06 02:24:40] -rwx------ 1 boinc boinc     36322 Mar  5 10:54 runpilot2-wrapper.sh
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      5111 Mar  5 10:55 queuedata.json
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc       100 Mar  6 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 02:24:40] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 01:26 run_atlas
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc       105 Mar  6 01:26 job.xml
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc 440434511 Mar  6 01:26 EVNT.46701403._002143.pool.root.1
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc    597957 Mar  6 01:26 input.tar.gz
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc     15845 Mar  6 01:26 start_atlas.sh
[2026-03-06 02:24:40] drwxrwx--x 2 boinc boinc      4096 Mar  6 01:26 shared
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc         0 Mar  6 01:26 boinc_setup_complete
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      6438 Mar  6 01:26 init_data.xml
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc         0 Mar  6 01:26 boinc_lockfile
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      2570 Mar  6 01:26 pandaJob.out
[2026-03-06 02:24:40] -rw------- 1 boinc boinc    998560 Mar  6 01:26 agis_schedconf.cvmfs.json
[2026-03-06 02:24:40] -rw------- 1 boinc boinc   1521291 Mar  6 01:26 agis_ddmendpoints.agis.ALL.json
[2026-03-06 02:24:40] -rw------- 1 boinc boinc       426 Mar  6 01:26 workernode_map.json
[2026-03-06 02:24:40] drwx------ 5 boinc boinc      4096 Mar  6 01:26 pilot3
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc       530 Mar  6 02:23 boinc_task_state.xml
[2026-03-06 02:24:40] -rw------- 1 boinc boinc 184528819 Mar  6 02:23 HITS.48955015._004885.pool.root.1
[2026-03-06 02:24:40] -rw------- 1 boinc boinc      1012 Mar  6 02:24 memory_monitor_summary.json
[2026-03-06 02:24:40] -rw------- 1 boinc boinc    272558 Mar  6 02:24 log.48955015._004885.job.log.tgz.1
[2026-03-06 02:24:40] -rw------- 1 boinc boinc      6299 Mar  6 02:24 heartbeat.json
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      8192 Mar  6 02:24 boinc_mmap_file
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc        27 Mar  6 02:24 wrapper_checkpoint.txt
[2026-03-06 02:24:40] -rw------- 1 boinc boinc        95 Mar  6 02:24 pilot_heartbeat.json
[2026-03-06 02:24:40] -rw------- 1 boinc boinc       747 Mar  6 02:24 pilotlog.txt
[2026-03-06 02:24:40] -rw------- 1 boinc boinc    525132 Mar  6 02:24 log.48955015._004885.job.log.1
[2026-03-06 02:24:40] -rw------- 1 boinc boinc       357 Mar  6 02:24 output.list
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc       620 Mar  6 02:24 runtime_log
[2026-03-06 02:24:40] -rw------- 1 boinc boinc    819200 Mar  6 02:24 result.tar.gz
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      8916 Mar  6 02:24 runtime_log.err
[2026-03-06 02:24:40] -rw------- 1 boinc boinc       661 Mar  6 02:24 PovMDmlaKI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbTLLDmbrt62n.diag
[2026-03-06 02:24:40] -rw-r--r-- 1 boinc boinc      9618 Mar  6 02:24 stderr.txt
[2026-03-06 02:24:40] HITS file was successfully produced:
[2026-03-06 02:24:40] -rw------- 1 boinc boinc 184528819 Mar  6 02:23 shared/HITS.pool.root.1
[2026-03-06 02:24:40]  *** Contents of shared directory: ***
[2026-03-06 02:24:40] total 611724
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc 440434511 Mar  6 01:26 ATLAS.root_0
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc    597957 Mar  6 01:26 input.tar.gz
[2026-03-06 02:24:40] -rw-r--r-- 2 boinc boinc     15845 Mar  6 01:26 start_atlas.sh
[2026-03-06 02:24:40] -rw------- 1 boinc boinc 184528819 Mar  6 02:23 HITS.pool.root.1
[2026-03-06 02:24:40] -rw------- 1 boinc boinc    819200 Mar  6 02:24 result.tar.gz
02:24:41 (2335231): run_atlas exited; CPU time 12869.837488
02:24:41 (2335231): called boinc_finish(0)

</stderr_txt>
]]>

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