Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:43 (1804299): wrapper (7.7.26015): starting
07:29:43 (1804299): wrapper: running run_atlas (--nthreads 9)
[2026-03-05 07:29:43] Arguments: --nthreads 9
[2026-03-05 07:29:43] Threads: 9
[2026-03-05 07:29:43] Checking for CVMFS
[2026-03-05 07:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 07:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 07:29:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 07:29:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 07:29:43] 2.13.3.0 2295398 96082 114988 156918 1 188 32452272 37030912 1832 16776704 0 74885676 99.984 3775460 33234 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 07:29:43] CVMFS is ok
[2026-03-05 07:29:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 07:29:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 07:29:43] Further information can be found at the LHC@home message board.
[2026-03-05 07:29:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 07:29:43] Checking for apptainer binary...
[2026-03-05 07:29:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 07:29:43] Running /usr/bin/apptainer --version
[2026-03-05 07:29:43] apptainer version 1.4.5-2.el9
[2026-03-05 07:29:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 07:29:43] c-205-36.aglt2.org
[2026-03-05 07:29:43] apptainer works
[2026-03-05 07:29:43] Set ATHENA_PROC_NUMBER=9
[2026-03-05 07:29:43] Set ATHENA_CORE_NUMBER=9
[2026-03-05 07:29:43] Starting ATLAS job with PandaID=7038567236
[2026-03-05 07:29:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 08:43:11]  *** The last 200 lines of the pilot log: ***
[2026-03-05 08:43:11]  is_tar=False
[2026-03-05 08:43:11]  lfn=log.48955006._002466.job.log.tgz.1
[2026-03-05 08:43:11]  mtime=0
[2026-03-05 08:43:11]  protocol_id=None
[2026-03-05 08:43:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 08:43:11]  replicas=None
[2026-03-05 08:43:11]  scope=mc23_13p6TeV
[2026-03-05 08:43:11]  status=None
[2026-03-05 08:43:11]  status_code=0
[2026-03-05 08:43:11]  storage_token=
[2026-03-05 08:43:11]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7038567236/log.48955006._002466.job.log.tgz.1
[2026-03-05 08:43:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/66/log.48955006._002466.job.log.tgz.1
[2026-03-05 08:43:11]  workdir=None
[2026-03-05 08:43:11] ]
[2026-03-05 08:43:11] 2026-03-05 13:42:01,610 | INFO     | transferring file log.48955006._002466.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7038567236/log.48955006._002466.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 08:43:11] 2026-03-05 13:42:01,610 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7038567236/log.48955006._002466.job.log.tgz.1 /tmp/boinchome/slots/1/log.48955006._002466.job
[2026-03-05 08:43:11] 2026-03-05 13:42:01,626 | INFO     | adding to output.list: log.48955006._002466.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/66/log.48955006._002466.job.log.tg
[2026-03-05 08:43:11] 2026-03-05 13:42:01,627 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 08:43:11] 2026-03-05 13:42:01,627 | INFO     | summary of transferred files:
[2026-03-05 08:43:11] 2026-03-05 13:42:01,627 | INFO     |  -- lfn=log.48955006._002466.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 08:43:11] 2026-03-05 13:42:01,628 | INFO     | stage-out finished correctly
[2026-03-05 08:43:11] 2026-03-05 13:42:02,615 | INFO     | time since job start (4325s) is within the limit (349056.0s)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,828 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 08:43:11] 2026-03-05 13:42:02,933 | INFO     | job 7038567236 has state=finished
[2026-03-05 08:43:11] 2026-03-05 13:42:02,933 | INFO     | preparing for final server update for job 7038567236 in state='finished'
[2026-03-05 08:43:11] 2026-03-05 13:42:02,934 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7038567236/jobReport.json
[2026-03-05 08:43:11] 2026-03-05 13:42:02,937 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-05 08:43:11] 2026-03-05 13:42:02,937 | INFO     | this job has now completed (state=finished)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,937 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,937 | INFO     | log transfer has been attempted: DONE
[2026-03-05 08:43:11] 2026-03-05 13:42:02,938 | INFO     | job 7038567236 has finished - writing final server update
[2026-03-05 08:43:11] 2026-03-05 13:42:02,938 | INFO     | total number of processed events: 400 (read)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,945 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7038567236/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,945 | INFO     | extracted standard info from prmon json
[2026-03-05 08:43:11] 2026-03-05 13:42:02,946 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 08:43:11] 2026-03-05 13:42:02,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 08:43:11] 2026-03-05 13:42:02,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 08:43:11] 2026-03-05 13:42:02,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 08:43:11] 2026-03-05 13:42:02,948 | INFO     | fitting pss+swap vs Time
[2026-03-05 08:43:11] 2026-03-05 13:42:02,948 | INFO     | sum of square deviations: 81266640.0
[2026-03-05 08:43:11] 2026-03-05 13:42:02,949 | INFO     | sum of deviations: -110347658.0
[2026-03-05 08:43:11] 2026-03-05 13:42:02,949 | INFO     | mean x: 1772716044.5
[2026-03-05 08:43:11] 2026-03-05 13:42:02,949 | INFO     | mean y: 2568456.0625
[2026-03-05 08:43:11] 2026-03-05 13:42:02,949 | INFO     | intersect: 2409645502.8014665
[2026-03-05 08:43:11] 2026-03-05 13:42:02,949 | INFO     | chi2: 0.004274878166782571
[2026-03-05 08:43:11] 2026-03-05 13:42:02,950 | INFO     | current memory leak: -1.36 B/s (using 64 data points, chi2=0.00)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,950 | INFO     | could have reported an average CPU frequency of 2712 MHz (6 samples)
[2026-03-05 08:43:11] 2026-03-05 13:42:02,950 | INFO     | ..............................
[2026-03-05 08:43:11] 2026-03-05 13:42:02,950 | INFO     | . Timing measurements:
[2026-03-05 08:43:11] 2026-03-05 13:42:02,950 | INFO     | . get job = 0 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . initial setup = 6 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . payload setup = 4 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . stage-in = 0 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . payload execution = 4303 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . stage-out = 0 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | . log creation = 0 s
[2026-03-05 08:43:11] 2026-03-05 13:42:02,951 | INFO     | ..............................
[2026-03-05 08:43:11] 2026-03-05 13:42:03,054 | INFO     | 
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | job summary report
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | --------------------------------------------------
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | PanDA job id: 7038567236
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | task id: 48955006
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | errors: (none)
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | pilot state: finished 
[2026-03-05 08:43:11] 2026-03-05 13:42:03,055 | INFO     | transexitcode: 0
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | exeerrorcode: 0
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | exeerrordiag: 
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | exitcode: 0
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | exitmsg: OK
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | cpuconsumptiontime: 35296 s
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | nevents: 400
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | neventsw: 0
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | pid: 1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:03,056 | INFO     | pgrp: 1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | corecount: 9
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | event service: False
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | sizes: {0: 2295591, 1: 2295797, 11: 2295825, 4311: 2321999, 4312: 2321998, 4313: 2331052, 4314: 2331430}
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | --------------------------------------------------
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | 
[2026-03-05 08:43:11] 2026-03-05 13:42:03,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-05 08:43:11] 2026-03-05 13:42:03,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 08:43:11] 2026-03-05 13:42:03,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,077 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 08:43:11] 2026-03-05 13:42:03,077 | INFO     | job 7038567236 has completed (purged errors)
[2026-03-05 08:43:11] 2026-03-05 13:42:03,077 | INFO     | overall cleanup function is called
[2026-03-05 08:43:11] 2026-03-05 13:42:03,857 | INFO     | PID=1807991 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:43:11] 2026-03-05 13:42:03,857 | INFO     | .. there are 3 such processes running
[2026-03-05 08:43:11] 2026-03-05 13:42:04,085 | INFO     | --- collectZombieJob: --- 10, [1812640]
[2026-03-05 08:43:11] 2026-03-05 13:42:04,086 | INFO     | zombie collector waiting for pid 1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:04,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 08:43:11] 2026-03-05 13:42:04,086 | INFO     | collected zombie processes
[2026-03-05 08:43:11] 2026-03-05 13:42:04,086 | INFO     | will attempt to kill all subprocesses of pid=1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:04,276 | INFO     | process IDs to be killed: [1812640] (in reverse order)
[2026-03-05 08:43:11] 2026-03-05 13:42:04,331 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 08:43:11] 2026-03-05 13:42:04,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 08:43:11] 2026-03-05 13:42:04,336 | INFO     | did not find any defunct processes belonging to 1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:04,341 | INFO     | did not find any defunct processes belonging to 1812640
[2026-03-05 08:43:11] 2026-03-05 13:42:04,341 | INFO     | ready for new job
[2026-03-05 08:43:11] 2026-03-05 13:42:04,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 08:43:11] 2026-03-05 13:42:04,343 | INFO     | **************************************
[2026-03-05 08:43:11] 2026-03-05 13:42:04,343 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 08:43:11] 2026-03-05 13:42:04,343 | INFO     | **************************************
[2026-03-05 08:43:11] 2026-03-05 13:42:04,343 | INFO     | 
[2026-03-05 08:43:11] 2026-03-05 13:42:04,345 | INFO     | architecture information:
[2026-03-05 08:43:11] 2026-03-05 13:42:04,345 | INFO     | executing command: cat /etc/os-release
[2026-03-05 08:43:11] 2026-03-05 13:42:04,357 | INFO     | cat /etc/os-release:
[2026-03-05 08:43:11] NAME="CentOS Linux"
[2026-03-05 08:43:11] VERSION="7 (Core)"
[2026-03-05 08:43:11] ID="centos"
[2026-03-05 08:43:11] ID_LIKE="rhel fedora"
[2026-03-05 08:43:11] VERSION_ID="7"
[2026-03-05 08:43:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 08:43:11] ANSI_COLOR="0;31"
[2026-03-05 08:43:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 08:43:11] HOME_URL="https://www.centos.org/"
[2026-03-05 08:43:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 08:43:11] 
[2026-03-05 08:43:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 08:43:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 08:43:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 08:43:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 08:43:11] 
[2026-03-05 08:43:11] 2026-03-05 13:42:04,357 | INFO     | **************************************
[2026-03-05 08:43:11] 2026-03-05 13:42:04,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-05 08:43:11] 2026-03-05 13:42:04,873 | INFO     | sufficient remaining disk space (40383807488 B)
[2026-03-05 08:43:11] 2026-03-05 13:42:04,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 08:43:11] 2026-03-05 13:42:04,873 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 08:43:11] 2026-03-05 13:42:04,873 | INFO     | update_server=False
[2026-03-05 08:43:11] 2026-03-05 13:42:04,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 08:43:11] 2026-03-05 13:42:04,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:43:11] 2026-03-05 13:42:04,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 08:43:11] 2026-03-05 13:42:04,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 08:43:11] 2026-03-05 13:42:05,610 | INFO     | all data control threads have been joined
[2026-03-05 08:43:11] 2026-03-05 13:42:05,857 | INFO     | all job control threads have been joined
[2026-03-05 08:43:11] 2026-03-05 13:42:05,879 | INFO     | [job] retrieve thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:05,879 | INFO     | [job] queue monitor thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,227 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,247 | INFO     | all payload control threads have been joined
[2026-03-05 08:43:11] 2026-03-05 13:42:06,352 | INFO     | [job] validate thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,501 | WARNING  | process 1812640 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 08:43:11] 2026-03-05 13:42:06,607 | INFO     | [payload] validate_post thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,615 | INFO     | [data] control thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,645 | INFO     | [payload] failed_post thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,651 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 08:43:11] 2026-03-05 13:42:06,762 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,837 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,842 | INFO     | number of running child processes to parent process 1812640: 1
[2026-03-05 08:43:11] 2026-03-05 13:42:06,842 | INFO     | maximum number of monitored processes: 6
[2026-03-05 08:43:11] 2026-03-05 13:42:06,842 | INFO     | aborting job monitoring since job object (job id=7038567236) has expired
[2026-03-05 08:43:11] 2026-03-05 13:42:06,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:43:11] 2026-03-05 13:42:06,842 | INFO     | will abort loop
[2026-03-05 08:43:11] 2026-03-05 13:42:06,857 | INFO     | [job] control thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:06,880 | INFO     | [data] copytool_out thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:07,154 | INFO     | [data] copytool_in thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:07,252 | INFO     | [payload] control thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:07,848 | INFO     | [job] job monitor thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:08,880 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:15,485 | INFO     | job.realtimelogging is not enabled
[2026-03-05 08:43:11] 2026-03-05 13:42:16,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 08:43:11] 2026-03-05 13:42:36,159 | INFO     | PID=1807991 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:43:11] 2026-03-05 13:42:36,159 | INFO     | .. there are 3 such processes running
[2026-03-05 08:43:11] 2026-03-05 13:42:36,159 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 08:43:11] 2026-03-05 13:42:36,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 08:43:11] 2026-03-05 13:42:36,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 08:43:11] 2026-03-05 13:43:04,259 | INFO     | [monitor] cgroup control has ended
[2026-03-05 08:43:11] 2026-03-05 13:43:05,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049099024192)>', '<ExcThread(monitor, started 140048481646336)>']
[2026-03-05 08:43:11] 2026-03-05 13:43:06,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 08:43:11] 2026-03-05 13:43:06,303 | INFO     | [monitor] control thread has ended
[2026-03-05 08:43:11] 2026-03-05 13:43:10,843 | INFO     | all workflow threads have been joined
[2026-03-05 08:43:11] 2026-03-05 13:43:10,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 08:43:11] 2026-03-05 13:43:10,843 | INFO     | traces error code: 0
[2026-03-05 08:43:11] 2026-03-05 13:43:10,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 08:43:11] 2026-03-05 13:43:10,947 [wrapper] ==== pilot stdout END ====
[2026-03-05 08:43:11] 2026-03-05 13:43:10,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 08:43:11] 2026-03-05 13:43:10,952 [wrapper] pilotpid: 1807991
[2026-03-05 08:43:11] 2026-03-05 13:43:10,954 [wrapper] Pilot exit status: 0
[2026-03-05 08:43:11] 2026-03-05 13:43:10,962 [wrapper] pandaids: 7038567236
[2026-03-05 08:43:11] 2026-03-05 13:43:11,001 [wrapper] cleanup supervisor_pilot 1874264 1807992
[2026-03-05 08:43:11] 2026-03-05 13:43:11,003 [wrapper] Test setup, not cleaning
[2026-03-05 08:43:11] 2026-03-05 13:43:11,006 [wrapper] apfmon messages muted
[2026-03-05 08:43:11] 2026-03-05 13:43:11,008 [wrapper] ==== wrapper stdout END ====
[2026-03-05 08:43:11] 2026-03-05 13:43:11,011 [wrapper] ==== wrapper stderr END ====
[2026-03-05 08:43:11]  *** Error codes and diagnostics ***
[2026-03-05 08:43:11]     "exeErrorCode": 0,
[2026-03-05 08:43:11]     "exeErrorDiag": "",
[2026-03-05 08:43:11]     "pilotErrorCode": 0,
[2026-03-05 08:43:11]     "pilotErrorDiag": "",
[2026-03-05 08:43:11]  *** Listing of results directory ***
[2026-03-05 08:43:11] total 606776
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 23:31 pilot3.tar.gz
[2026-03-05 08:43:11] -rwx------. 1 boincer umatlas     36322 Mar  4 23:34 runpilot2-wrapper.sh
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 23:36 queuedata.json
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas       100 Mar  5 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 08:43:11] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  5 07:29 run_atlas
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas       105 Mar  5 07:29 job.xml
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas 434816312 Mar  5 07:29 EVNT.46701403._000050.pool.root.1
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 07:29 start_atlas.sh
[2026-03-05 08:43:11] drwxrwx--x. 2 boincer umatlas      4096 Mar  5 07:29 shared
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas    597945 Mar  5 07:29 input.tar.gz
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas         0 Mar  5 07:29 boinc_lockfile
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas      2560 Mar  5 07:29 pandaJob.out
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas    998489 Mar  5 07:29 agis_schedconf.cvmfs.json
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas   1521291 Mar  5 07:29 agis_ddmendpoints.agis.ALL.json
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas       440 Mar  5 07:29 workernode_map.json
[2026-03-05 08:43:11] drwx------. 5 boincer umatlas      4096 Mar  5 07:29 pilot3
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas      6531 Mar  5 08:37 init_data.xml
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas 180621256 Mar  5 08:41 HITS.48955006._002466.pool.root.1
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas       530 Mar  5 08:41 boinc_task_state.xml
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas        95 Mar  5 08:41 pilot_heartbeat.json
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas      1032 Mar  5 08:41 memory_monitor_summary.json
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas    339564 Mar  5 08:42 log.48955006._002466.job.log.tgz.1
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas      6369 Mar  5 08:42 heartbeat.json
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas      8192 Mar  5 08:43 boinc_mmap_file
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas        27 Mar  5 08:43 wrapper_checkpoint.txt
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas      5412 Mar  5 08:43 pilotlog.txt
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas    647166 Mar  5 08:43 log.48955006._002466.job.log.1
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas       357 Mar  5 08:43 output.list
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas       620 Mar  5 08:43 runtime_log
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas   1003520 Mar  5 08:43 result.tar.gz
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas       650 Mar  5 08:43 uyOKDmKbFI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNrKLDmMyRFdm.diag
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas      8816 Mar  5 08:43 runtime_log.err
[2026-03-05 08:43:11] -rw-r--r--. 1 boincer umatlas     21628 Mar  5 08:43 stderr.txt
[2026-03-05 08:43:11] HITS file was successfully produced:
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas 180621256 Mar  5 08:41 shared/HITS.pool.root.1
[2026-03-05 08:43:11]  *** Contents of shared directory: ***
[2026-03-05 08:43:11] total 602600
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas 434816312 Mar  5 07:29 ATLAS.root_0
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 07:29 start_atlas.sh
[2026-03-05 08:43:11] -rw-r--r--. 2 boincer umatlas    597945 Mar  5 07:29 input.tar.gz
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas 180621256 Mar  5 08:41 HITS.pool.root.1
[2026-03-05 08:43:11] -rw-------. 1 boincer umatlas   1003520 Mar  5 08:43 result.tar.gz
08:43:12 (1804299): run_atlas exited; CPU time 35383.143927
08:43:12 (1804299): called boinc_finish(0)

</stderr_txt>
]]>

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