Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:21 (30646): wrapper (7.7.26015): starting
10:57:21 (30646): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 10:57:21] Arguments: --nthreads 12
[2026-03-05 10:57:21] Threads: 12
[2026-03-05 10:57:21] Checking for CVMFS
[2026-03-05 10:57:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 10:57:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 10:57:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 10:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 10:57:21] 2.11.2.0 2979 430465 97840 156924 2 52 15990804 20275201 1 130560 1 183159990 99.957 24130999 17502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 10:57:21] CVMFS is ok
[2026-03-05 10:57:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 10:57:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 10:57:21] Further information can be found at the LHC@home message board.
[2026-03-05 10:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 10:57:21] Checking for apptainer binary...
[2026-03-05 10:57:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 10:57:21] Running /usr/bin/apptainer --version
[2026-03-05 10:57:21] apptainer version 1.3.2-1.el7
[2026-03-05 10:57:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 10:57:23] c-205-21.aglt2.org
[2026-03-05 10:57:23] apptainer works
[2026-03-05 10:57:23] Set ATHENA_PROC_NUMBER=12
[2026-03-05 10:57:23] Set ATHENA_CORE_NUMBER=12
[2026-03-05 10:57:23] Starting ATLAS job with PandaID=7038620672
[2026-03-05 10:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 12:03:56]  *** The last 200 lines of the pilot log: ***
[2026-03-05 12:03:56]  guid=224d8bc3-fd12-4bf5-bbb1-8178ddd51a26
[2026-03-05 12:03:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 12:03:56]  is_altstaged=None
[2026-03-05 12:03:56]  is_tar=False
[2026-03-05 12:03:56]  lfn=log.48955006._005827.job.log.tgz.1
[2026-03-05 12:03:56]  mtime=0
[2026-03-05 12:03:56]  protocol_id=None
[2026-03-05 12:03:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 12:03:56]  replicas=None
[2026-03-05 12:03:56]  scope=mc23_13p6TeV
[2026-03-05 12:03:56]  status=None
[2026-03-05 12:03:56]  status_code=0
[2026-03-05 12:03:56]  storage_token=
[2026-03-05 12:03:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038620672/log.48955006._005827.job.log.tgz.1
[2026-03-05 12:03:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/5f/log.48955006._005827.job.log.tgz.1
[2026-03-05 12:03:56]  workdir=None
[2026-03-05 12:03:56] ]
[2026-03-05 12:03:56] 2026-03-05 17:02:49,276 | INFO     | transferring file log.48955006._005827.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038620672/log.48955006._005827.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 12:03:56] 2026-03-05 17:02:49,276 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038620672/log.48955006._005827.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._005827.job
[2026-03-05 12:03:56] 2026-03-05 17:02:49,300 | INFO     | adding to output.list: log.48955006._005827.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/5f/log.48955006._005827.job.log.tg
[2026-03-05 12:03:56] 2026-03-05 17:02:49,301 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 12:03:56] 2026-03-05 17:02:49,301 | INFO     | summary of transferred files:
[2026-03-05 12:03:56] 2026-03-05 17:02:49,301 | INFO     |  -- lfn=log.48955006._005827.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 12:03:56] 2026-03-05 17:02:49,301 | INFO     | stage-out finished correctly
[2026-03-05 12:03:56] 2026-03-05 17:02:49,380 | INFO     | time since job start (3906s) is within the limit (349056.0s)
[2026-03-05 12:03:56] 2026-03-05 17:02:49,978 | INFO     | monitor loop #297: job 0:7038620672 is in state 'finished'
[2026-03-05 12:03:56] 2026-03-05 17:02:49,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 12:03:56] 2026-03-05 17:02:51,338 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 12:03:56] 2026-03-05 17:02:51,391 | INFO     | time since job start (3908s) is within the limit (349056.0s)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,481 | INFO     | monitor loop #298: job 0:7038620672 is in state 'finished'
[2026-03-05 12:03:56] 2026-03-05 17:02:52,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,538 | INFO     | job 7038620672 has state=finished
[2026-03-05 12:03:56] 2026-03-05 17:02:52,538 | INFO     | preparing for final server update for job 7038620672 in state='finished'
[2026-03-05 12:03:56] 2026-03-05 17:02:52,538 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038620672/jobReport.json
[2026-03-05 12:03:56] 2026-03-05 17:02:52,541 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-05 12:03:56] 2026-03-05 17:02:52,541 | INFO     | this job has now completed (state=finished)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,541 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,542 | INFO     | log transfer has been attempted: DONE
[2026-03-05 12:03:56] 2026-03-05 17:02:52,542 | INFO     | job 7038620672 has finished - writing final server update
[2026-03-05 12:03:56] 2026-03-05 17:02:52,542 | INFO     | total number of processed events: 400 (read)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,544 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038620672/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,544 | INFO     | extracted standard info from prmon json
[2026-03-05 12:03:56] 2026-03-05 17:02:52,544 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 12:03:56] 2026-03-05 17:02:52,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 12:03:56] 2026-03-05 17:02:52,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 12:03:56] 2026-03-05 17:02:52,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 12:03:56] 2026-03-05 17:02:52,546 | INFO     | fitting pss+swap vs Time
[2026-03-05 12:03:56] 2026-03-05 17:02:52,546 | INFO     | sum of square deviations: 57407588.0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | sum of deviations: -5424464528.000001
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | mean x: 1772728300.0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | mean y: 2746168.192982456
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | intersect: 167508508318.16772
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | chi2: 0.04971331448780857
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | current memory leak: -94.49 B/s (using 57 data points, chi2=0.05)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,547 | INFO     | could have reported an average CPU frequency of 1673 MHz (6 samples)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | ..............................
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . Timing measurements:
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . get job = 0 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . initial setup = 7 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . payload setup = 7 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . stage-in = 0 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . payload execution = 3883 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . stage-out = 0 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,548 | INFO     | . log creation = 0 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,549 | INFO     | ..............................
[2026-03-05 12:03:56] 2026-03-05 17:02:52,625 | INFO     | 
[2026-03-05 12:03:56] 2026-03-05 17:02:52,625 | INFO     | job summary report
[2026-03-05 12:03:56] 2026-03-05 17:02:52,625 | INFO     | --------------------------------------------------
[2026-03-05 12:03:56] 2026-03-05 17:02:52,625 | INFO     | PanDA job id: 7038620672
[2026-03-05 12:03:56] 2026-03-05 17:02:52,625 | INFO     | task id: 48955006
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | errors: (none)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | pilot state: finished 
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | transexitcode: 0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | exeerrorcode: 0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,626 | INFO     | exeerrordiag: 
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | exitcode: 0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | exitmsg: OK
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | cpuconsumptiontime: 41972 s
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | nevents: 400
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | neventsw: 0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | pid: 6767
[2026-03-05 12:03:56] 2026-03-05 17:02:52,627 | INFO     | pgrp: 6767
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | corecount: 12
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | event service: False
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | sizes: {0: 2295595, 1: 2295801, 11: 2295829, 3894: 2321628, 3895: 2330626, 3897: 2330682, 3898: 2331004}
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | --------------------------------------------------
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | 
[2026-03-05 12:03:56] 2026-03-05 17:02:52,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 12:03:56] 2026-03-05 17:02:52,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 12:03:56] 2026-03-05 17:02:52,655 | INFO     | job 7038620672 has completed (purged errors)
[2026-03-05 12:03:56] 2026-03-05 17:02:52,655 | INFO     | overall cleanup function is called
[2026-03-05 12:03:56] 2026-03-05 17:02:53,664 | INFO     | --- collectZombieJob: --- 10, [6767]
[2026-03-05 12:03:56] 2026-03-05 17:02:53,664 | INFO     | zombie collector waiting for pid 6767
[2026-03-05 12:03:56] 2026-03-05 17:02:53,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 12:03:56] 2026-03-05 17:02:53,665 | INFO     | collected zombie processes
[2026-03-05 12:03:56] 2026-03-05 17:02:53,665 | INFO     | will attempt to kill all subprocesses of pid=6767
[2026-03-05 12:03:56] 2026-03-05 17:02:53,753 | INFO     | process IDs to be killed: [6767] (in reverse order)
[2026-03-05 12:03:56] 2026-03-05 17:02:53,806 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 12:03:56] 2026-03-05 17:02:53,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 12:03:56] 2026-03-05 17:02:53,810 | INFO     | did not find any defunct processes belonging to 6767
[2026-03-05 12:03:56] 2026-03-05 17:02:53,813 | INFO     | did not find any defunct processes belonging to 6767
[2026-03-05 12:03:56] 2026-03-05 17:02:53,813 | INFO     | ready for new job
[2026-03-05 12:03:56] 2026-03-05 17:02:53,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 12:03:56] 2026-03-05 17:02:53,815 | INFO     | **************************************
[2026-03-05 12:03:56] 2026-03-05 17:02:53,815 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 12:03:56] 2026-03-05 17:02:53,815 | INFO     | **************************************
[2026-03-05 12:03:56] 2026-03-05 17:02:53,815 | INFO     | 
[2026-03-05 12:03:56] 2026-03-05 17:02:53,816 | INFO     | architecture information:
[2026-03-05 12:03:56] 2026-03-05 17:02:53,816 | INFO     | executing command: cat /etc/os-release
[2026-03-05 12:03:56] 2026-03-05 17:02:53,833 | INFO     | cat /etc/os-release:
[2026-03-05 12:03:56] NAME="CentOS Linux"
[2026-03-05 12:03:56] VERSION="7 (Core)"
[2026-03-05 12:03:56] ID="centos"
[2026-03-05 12:03:56] ID_LIKE="rhel fedora"
[2026-03-05 12:03:56] VERSION_ID="7"
[2026-03-05 12:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 12:03:56] ANSI_COLOR="0;31"
[2026-03-05 12:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 12:03:56] HOME_URL="https://www.centos.org/"
[2026-03-05 12:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 12:03:56] 
[2026-03-05 12:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 12:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 12:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 12:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 12:03:56] 
[2026-03-05 12:03:56] 2026-03-05 17:02:53,833 | INFO     | **************************************
[2026-03-05 12:03:56] 2026-03-05 17:02:54,336 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 12:03:56] 2026-03-05 17:02:54,352 | INFO     | sufficient remaining disk space (28907143168 B)
[2026-03-05 12:03:56] 2026-03-05 17:02:54,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 12:03:56] 2026-03-05 17:02:54,353 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 12:03:56] 2026-03-05 17:02:54,353 | INFO     | update_server=False
[2026-03-05 12:03:56] 2026-03-05 17:02:54,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 12:03:56] 2026-03-05 17:02:54,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 12:03:56] 2026-03-05 17:02:54,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 12:03:56] 2026-03-05 17:02:54,354 | INFO     | aborting loop
[2026-03-05 12:03:56] 2026-03-05 17:02:54,450 | INFO     | all data control threads have been joined
[2026-03-05 12:03:56] 2026-03-05 17:02:54,842 | INFO     | all payload control threads have been joined
[2026-03-05 12:03:56] 2026-03-05 17:02:54,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 12:03:56] 2026-03-05 17:02:54,973 | INFO     | all job control threads have been joined
[2026-03-05 12:03:56] 2026-03-05 17:02:55,359 | INFO     | [job] retrieve thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,359 | INFO     | [job] queue monitor thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,360 | INFO     | [job] job monitor thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,445 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,456 | INFO     | [data] control thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,460 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,680 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,847 | INFO     | [payload] control thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,941 | INFO     | [payload] validate_post thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,976 | INFO     | [data] copytool_in thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:55,978 | INFO     | [job] control thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:56,688 | INFO     | [job] validate thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:56,867 | INFO     | [payload] failed_post thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:56,896 | INFO     | [data] copytool_out thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:02:57,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 12:03:56] 2026-03-05 17:03:01,425 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:03:04,568 | INFO     | job.realtimelogging is not enabled
[2026-03-05 12:03:56] 2026-03-05 17:03:05,572 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 12:03:56] 2026-03-05 17:03:24,596 | INFO     | PID=2302 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-05 12:03:56] 2026-03-05 17:03:24,596 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 12:03:56] 2026-03-05 17:03:24,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 12:03:56] 2026-03-05 17:03:24,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 12:03:56] 2026-03-05 17:03:49,335 | INFO     | [monitor] cgroup control has ended
[2026-03-05 12:03:56] 2026-03-05 17:03:51,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760298968896)>', '<ExcThread(monitor, started 139759594739456)>']
[2026-03-05 12:03:56] 2026-03-05 17:03:51,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 12:03:56] 2026-03-05 17:03:51,734 | INFO     | [monitor] control thread has ended
[2026-03-05 12:03:56] 2026-03-05 17:03:56,154 | INFO     | all workflow threads have been joined
[2026-03-05 12:03:56] 2026-03-05 17:03:56,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 12:03:56] 2026-03-05 17:03:56,155 | INFO     | traces error code: 0
[2026-03-05 12:03:56] 2026-03-05 17:03:56,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 12:03:56] 2026-03-05 17:03:56,259 [wrapper] ==== pilot stdout END ====
[2026-03-05 12:03:56] 2026-03-05 17:03:56,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 12:03:56] 2026-03-05 17:03:56,267 [wrapper] pilotpid: 2302
[2026-03-05 12:03:56] 2026-03-05 17:03:56,271 [wrapper] Pilot exit status: 0
[2026-03-05 12:03:56] 2026-03-05 17:03:56,287 [wrapper] pandaids: 7038620672
[2026-03-05 12:03:56] 2026-03-05 17:03:56,335 [wrapper] cleanup supervisor_pilot 25293 2303
[2026-03-05 12:03:56] 2026-03-05 17:03:56,339 [wrapper] Test setup, not cleaning
[2026-03-05 12:03:56] 2026-03-05 17:03:56,343 [wrapper] apfmon messages muted
[2026-03-05 12:03:56] 2026-03-05 17:03:56,347 [wrapper] ==== wrapper stdout END ====
[2026-03-05 12:03:56] 2026-03-05 17:03:56,350 [wrapper] ==== wrapper stderr END ====
[2026-03-05 12:03:56]  *** Error codes and diagnostics ***
[2026-03-05 12:03:56]     "exeErrorCode": 0,
[2026-03-05 12:03:56]     "exeErrorDiag": "",
[2026-03-05 12:03:56]     "pilotErrorCode": 0,
[2026-03-05 12:03:56]     "pilotErrorDiag": "",
[2026-03-05 12:03:56]  *** Listing of results directory ***
[2026-03-05 12:03:56] total 614336
[2026-03-05 12:03:56] -rwx------ 1 boincer umatlas     36322 Mar  5 06:39 runpilot2-wrapper.sh
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas    584627 Mar  5 06:39 pilot3.tar.gz
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas      5111 Mar  5 06:40 queuedata.json
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas       100 Mar  5 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 12:03:56] -rwxr-xr-x 1 boincer umatlas      7986 Mar  5 10:57 run_atlas
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas       105 Mar  5 10:57 job.xml
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas 438326738 Mar  5 10:57 EVNT.46701403._000117.pool.root.1
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 10:57 start_atlas.sh
[2026-03-05 12:03:56] drwxrwx--x 2 boincer umatlas      4096 Mar  5 10:57 shared
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas    597951 Mar  5 10:57 input.tar.gz
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas         0 Mar  5 10:57 boinc_lockfile
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas      2562 Mar  5 10:57 pandaJob.out
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas        57 Mar  5 10:57 setup.sh.local
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas    998470 Mar  5 10:57 agis_schedconf.cvmfs.json
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas   1521291 Mar  5 10:57 agis_ddmendpoints.agis.ALL.json
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas       445 Mar  5 10:57 workernode_map.json
[2026-03-05 12:03:56] drwx------ 5 boincer umatlas      4096 Mar  5 10:57 pilot3
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas 184880188 Mar  5 12:02 HITS.48955006._005827.pool.root.1
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas       530 Mar  5 12:02 boinc_task_state.xml
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas        95 Mar  5 12:02 pilot_heartbeat.json
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas      1045 Mar  5 12:02 memory_monitor_summary.json
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas      5953 Mar  5 12:02 init_data.xml
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas    393555 Mar  5 12:02 log.48955006._005827.job.log.tgz.1
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas      6422 Mar  5 12:02 heartbeat.json
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 12:03 boinc_mmap_file
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas        27 Mar  5 12:03 wrapper_checkpoint.txt
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas      4813 Mar  5 12:03 pilotlog.txt
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas    576133 Mar  5 12:03 log.48955006._005827.job.log.1
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas       357 Mar  5 12:03 output.list
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas       620 Mar  5 12:03 runtime_log
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas    983040 Mar  5 12:03 result.tar.gz
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas       659 Mar  5 12:03 U3bNDmOEMI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwlNLDmTN65Dn.diag
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas      9343 Mar  5 12:03 runtime_log.err
[2026-03-05 12:03:56] -rw-r--r-- 1 boincer umatlas     21370 Mar  5 12:03 stderr.txt
[2026-03-05 12:03:56] HITS file was successfully produced:
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas 184880188 Mar  5 12:02 shared/HITS.pool.root.1
[2026-03-05 12:03:56]  *** Contents of shared directory: ***
[2026-03-05 12:03:56] total 610168
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas 438326738 Mar  5 10:57 ATLAS.root_0
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 10:57 start_atlas.sh
[2026-03-05 12:03:56] -rw-r--r-- 2 boincer umatlas    597951 Mar  5 10:57 input.tar.gz
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas 184880188 Mar  5 12:02 HITS.pool.root.1
[2026-03-05 12:03:56] -rw------- 1 boincer umatlas    983040 Mar  5 12:03 result.tar.gz
12:03:57 (30646): run_atlas exited; CPU time 41958.583042
12:03:57 (30646): called boinc_finish(0)

</stderr_txt>
]]>

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