Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:38 (2064833): wrapper (7.7.26015): starting
08:00:38 (2064833): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 08:00:38] Arguments: --nthreads 8
[2026-03-05 08:00:38] Threads: 8
[2026-03-05 08:00:38] Checking for CVMFS
[2026-03-05 08:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 08:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 08:00:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 08:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 08:00:39] 2.11.3.0 767685 136082 367304 156924 3 402 27094224 45568001 12353 130560 0 722384508 99.806 430117611 22487 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-05 08:00:39] CVMFS is ok
[2026-03-05 08:00:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 08:00:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 08:00:39] Further information can be found at the LHC@home message board.
[2026-03-05 08:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 08:00:39] Checking for apptainer binary...
[2026-03-05 08:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 08:00:39] Running /usr/bin/apptainer --version
[2026-03-05 08:00:39] apptainer version 1.4.1-1.el9
[2026-03-05 08:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 08:00:40] wns0005.triumf.lcg
[2026-03-05 08:00:40] apptainer works
[2026-03-05 08:00:40] Set ATHENA_PROC_NUMBER=8
[2026-03-05 08:00:40] Set ATHENA_CORE_NUMBER=8
[2026-03-05 08:00:40] Starting ATLAS job with PandaID=7038625096
[2026-03-05 08:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 08:08:00]  *** The last 200 lines of the pilot log: ***
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | wrong length of table data, x=[1772726648.0, 1772726709.0], y=[2982.0, 467709.0] (must be same and length>=4)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . Timing measurements:
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . get job = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . initial setup = 49 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload setup = 43 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-in = 1 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload execution = 103 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-out = 3 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . log creation = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038625096/pilotlog.txt
[2026-03-05 08:08:00] 2026-03-05 16:07:22,421 | INFO     | PID=2068605 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:08:00] 2026-03-05 16:07:22,422 | INFO     | .. there are 19 such processes running
[2026-03-05 08:08:00] 2026-03-05 16:07:22,561 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 08:08:00] - Log from pilotlog.txt -
[2026-03-05 08:08:00] 2026-03-05 16:07:22,320 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 08:08:00] 2026-03-05 16:07:22,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | wrong length of table data, x=[1772726648.0, 1772726709.0], y=[2982.0, 467709.0] (must be same and length>=4)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . Timing measurements:
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . get job = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . initial setup = 49 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload setup = 43 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-in = 1 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload execution = 103 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-out = 3 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . log creation = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038625096/pilotlog.txt
[2026-03-05 08:08:00] 2026-03-05 16:07:22,421 | INFO     | PID=2068605 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:08:00] 2026-03-05 16:07:22,422 | INFO     | .. there are 19 such processes running
[2026-03-05 08:08:00] 2026-03-05 16:07:22,561 | WARNING  | 
[2026-03-05 08:08:00] [begin log extracts]
[2026-03-05 08:08:00] - Log from pilotlog.txt -
[2026-03-05 08:08:00] 2026-03-05 16:07:22,320 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 08:08:00] 2026-03-05 16:07:22,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | WARNING  | wrong length of table data, x=[1772726648.0, 1772726709.0], y=[2982.0, 467709.0] (must be same and length>=4)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,321 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . Timing measurements:
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . get job = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . initial setup = 49 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload setup = 43 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-in = 1 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . payload execution = 103 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . stage-out = 3 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | . log creation = 0 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | ..............................
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 08:08:00] 2026-03-05 16:07:22,322 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038625096/pilotlog.txt
[2026-03-05 08:08:00] 2026-03-05 16:07:22,421 | INFO     | PID=2068605 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:08:00] 2026-03-05 16:07:22,422 | INFO     | .. there are 19 such processes running
[2026-03-05 08:08:00] [end log extracts]
[2026-03-05 08:08:00] 2026-03-05 16:07:22,561 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,562 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | 
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | job summary report
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | --------------------------------------------------
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | PanDA job id: 7038625096
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | task id: 48955006
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 08:04:58,603 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 08:08:00] 2026-03-05 16:07:22,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | pilot state: failed 
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | transexitcode: 65
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | exeerrorcode: 65
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | exitcode: 65
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | cpuconsumptiontime: 15 s
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | nevents: 0
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | neventsw: 0
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | pid: 2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | pgrp: 2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | corecount: 8
[2026-03-05 08:08:00] 2026-03-05 16:07:22,979 | INFO     | event service: False
[2026-03-05 08:08:00] 2026-03-05 16:07:22,980 | INFO     | sizes: {0: 2295309, 1: 2295365, 2: 2295421, 3: 2295421, 4: 2295421, 5: 2296038, 16: 2296038, 151: 2319338, 158: 2323630, 161: 2323686, 277: 2323852}
[2026-03-05 08:08:00] 2026-03-05 16:07:22,980 | INFO     | --------------------------------------------------
[2026-03-05 08:08:00] 2026-03-05 16:07:22,980 | INFO     | 
[2026-03-05 08:08:00] 2026-03-05 16:07:22,980 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 08:08:00] 2026-03-05 16:07:23,423 | INFO     | time since job start (293s) is within the limit (349056.0s)
[2026-03-05 08:08:00] 2026-03-05 16:07:23,520 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,520 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,520 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | job 7038625096 has completed (purged errors)
[2026-03-05 08:08:00] 2026-03-05 16:07:23,522 | INFO     | overall cleanup function is called
[2026-03-05 08:08:00] 2026-03-05 16:07:24,529 | INFO     | --- collectZombieJob: --- 10, [2073287]
[2026-03-05 08:08:00] 2026-03-05 16:07:24,529 | INFO     | zombie collector waiting for pid 2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:24,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 08:08:00] 2026-03-05 16:07:24,529 | INFO     | collected zombie processes
[2026-03-05 08:08:00] 2026-03-05 16:07:24,529 | INFO     | will attempt to kill all subprocesses of pid=2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:25,752 | INFO     | process IDs to be killed: [2073287] (in reverse order)
[2026-03-05 08:08:00] 2026-03-05 16:07:26,636 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 08:08:00] 2026-03-05 16:07:26,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 08:08:00] 2026-03-05 16:07:26,666 | INFO     | did not find any defunct processes belonging to 2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:26,691 | INFO     | did not find any defunct processes belonging to 2073287
[2026-03-05 08:08:00] 2026-03-05 16:07:26,691 | INFO     | ready for new job
[2026-03-05 08:08:00] 2026-03-05 16:07:26,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 08:08:00] 2026-03-05 16:07:26,719 | INFO     | **************************************
[2026-03-05 08:08:00] 2026-03-05 16:07:26,719 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 08:08:00] 2026-03-05 16:07:26,741 | INFO     | **************************************
[2026-03-05 08:08:00] 2026-03-05 16:07:26,741 | INFO     | 
[2026-03-05 08:08:00] 2026-03-05 16:07:26,742 | INFO     | architecture information:
[2026-03-05 08:08:00] 2026-03-05 16:07:26,746 | INFO     | executing command: cat /etc/os-release
[2026-03-05 08:08:00] 2026-03-05 16:07:26,885 | INFO     | cat /etc/os-release:
[2026-03-05 08:08:00] NAME="CentOS Linux"
[2026-03-05 08:08:00] VERSION="7 (Core)"
[2026-03-05 08:08:00] ID="centos"
[2026-03-05 08:08:00] ID_LIKE="rhel fedora"
[2026-03-05 08:08:00] VERSION_ID="7"
[2026-03-05 08:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 08:08:00] ANSI_COLOR="0;31"
[2026-03-05 08:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 08:08:00] HOME_URL="https://www.centos.org/"
[2026-03-05 08:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 08:08:00] 
[2026-03-05 08:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 08:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 08:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 08:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 08:08:00] 
[2026-03-05 08:08:00] 2026-03-05 16:07:26,885 | INFO     | **************************************
[2026-03-05 08:08:00] 2026-03-05 16:07:27,389 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 08:08:00] 2026-03-05 16:07:27,520 | INFO     | sufficient remaining disk space (1445714722816 B)
[2026-03-05 08:08:00] 2026-03-05 16:07:27,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 08:08:00] 2026-03-05 16:07:27,520 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 08:08:00] 2026-03-05 16:07:27,521 | INFO     | update_server=False
[2026-03-05 08:08:00] 2026-03-05 16:07:27,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 08:08:00] 2026-03-05 16:07:27,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 08:08:00] 2026-03-05 16:07:27,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:08:00] 2026-03-05 16:07:28,077 | INFO     | all data control threads have been joined
[2026-03-05 08:08:00] 2026-03-05 16:07:28,259 | INFO     | all job control threads have been joined
[2026-03-05 08:08:00] 2026-03-05 16:07:28,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:08:00] 2026-03-05 16:07:28,317 | INFO     | aborting loop
[2026-03-05 08:08:00] 2026-03-05 16:07:28,432 | INFO     | all payload control threads have been joined
[2026-03-05 08:08:00] 2026-03-05 16:07:28,527 | INFO     | [job] retrieve thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:28,649 | INFO     | [payload] failed_post thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:28,939 | INFO     | [payload] validate_post thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,010 | INFO     | [job] queue monitor thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,083 | INFO     | [data] control thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,265 | INFO     | [job] control thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,323 | INFO     | [job] job monitor thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,438 | INFO     | [payload] control thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,535 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,539 | INFO     | [data] copytool_in thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,549 | INFO     | [data] copytool_out thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,582 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,707 | INFO     | [job] validate thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:29,722 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:30,351 | INFO     | [monitor] cgroup control has ended
[2026-03-05 08:08:00] 2026-03-05 16:07:30,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 08:08:00] 2026-03-05 16:07:34,759 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 08:08:00] 2026-03-05 16:07:36,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433957181248)>', '<ExcThread(monitor, started 140433283872512)>']
[2026-03-05 08:08:00] 2026-03-05 16:07:41,659 | INFO     | all workflow threads have been joined
[2026-03-05 08:08:00] 2026-03-05 16:07:41,660 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 08:08:00] 2026-03-05 16:07:41,660 | INFO     | traces error code: 0
[2026-03-05 08:08:00] 2026-03-05 16:07:41,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 08:08:00] 2026-03-05 16:07:57,567 | INFO     | PID=2068605 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:08:00] 2026-03-05 16:07:57,568 | INFO     | .. there are 19 such processes running
[2026-03-05 08:08:00] 2026-03-05 16:07:57,568 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 08:08:00] 2026-03-05 16:07:57,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 08:08:00] 2026-03-05 16:07:57,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 08:08:00] 2026-03-05 16:07:57,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 08:08:00] 2026-03-05 16:07:57,584 | INFO     | [monitor] control thread has ended
[2026-03-05 08:08:00] 2026-03-05 16:07:58,232 [wrapper] ==== pilot stdout END ====
[2026-03-05 08:08:00] 2026-03-05 16:07:58,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 08:08:00] 2026-03-05 16:07:58,322 [wrapper] pilotpid: 2068605
[2026-03-05 08:08:00] 2026-03-05 16:07:58,361 [wrapper] Pilot exit status: 0
[2026-03-05 08:08:00] 2026-03-05 16:07:58,556 [wrapper] pandaids: 7038625096
[2026-03-05 08:08:00] 2026-03-05 16:07:58,927 [wrapper] cleanup supervisor_pilot 2068611 2068606
[2026-03-05 08:08:00] 2026-03-05 16:07:58,965 [wrapper] Test setup, not cleaning
[2026-03-05 08:08:00] 2026-03-05 16:07:59,002 [wrapper] apfmon messages muted
[2026-03-05 08:08:00] 2026-03-05 16:07:59,045 [wrapper] ==== wrapper stdout END ====
[2026-03-05 08:08:00] 2026-03-05 16:07:59,110 [wrapper] ==== wrapper stderr END ====
[2026-03-05 08:08:00]  *** Error codes and diagnostics ***
[2026-03-05 08:08:00]     "exeErrorCode": 65,
[2026-03-05 08:08:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 08:08:00]     "pilotErrorCode": 1305,
[2026-03-05 08:08:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 08:08:00]  *** Listing of results directory ***
[2026-03-05 08:08:00] total 434856
[2026-03-05 08:08:00] -rwx------. 1 boinc boinc     36322 Mar  5 03:38 runpilot2-wrapper.sh
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc      5111 Mar  5 03:39 queuedata.json
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc    584627 Mar  5 03:39 pilot3.tar.gz
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc       100 Mar  5 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 08:08:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 08:00 run_atlas
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc       105 Mar  5 08:00 job.xml
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc      6443 Mar  5 08:00 init_data.xml
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc 441130723 Mar  5 08:00 EVNT.46701403._000125.pool.root.1
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc     15845 Mar  5 08:00 start_atlas.sh
[2026-03-05 08:08:00] drwxrwx--x. 2 boinc boinc      4096 Mar  5 08:00 shared
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc    597951 Mar  5 08:00 input.tar.gz
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc         0 Mar  5 08:00 boinc_lockfile
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc      2562 Mar  5 08:00 pandaJob.out
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc    998470 Mar  5 08:01 agis_schedconf.cvmfs.json
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc   1521291 Mar  5 08:01 agis_ddmendpoints.agis.ALL.json
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc       437 Mar  5 08:02 workernode_map.json
[2026-03-05 08:08:00] drwx------. 5 boinc boinc      4096 Mar  5 08:02 pilot3
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc       525 Mar  5 08:04 boinc_task_state.xml
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc       980 Mar  5 08:05 memory_monitor_summary.json
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc     22594 Mar  5 08:05 log.48955006._006233.job.log.tgz.1
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc      7002 Mar  5 08:07 heartbeat.json
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc        95 Mar  5 08:07 pilot_heartbeat.json
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc       823 Mar  5 08:07 pilotlog.txt
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc      8192 Mar  5 08:07 boinc_mmap_file
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc        23 Mar  5 08:07 wrapper_checkpoint.txt
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc     95999 Mar  5 08:07 log.48955006._006233.job.log.1
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc       188 Mar  5 08:07 output.list
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc       620 Mar  5 08:07 runtime_log
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc    133120 Mar  5 08:07 result.tar.gz
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc      8633 Mar  5 08:07 runtime_log.err
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc       643 Mar  5 08:07 fwCLDmQDMI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQhLLDm6U8WVn.diag
[2026-03-05 08:08:00] -rw-r--r--. 1 boinc boinc     22165 Mar  5 08:08 stderr.txt
[2026-03-05 08:08:00] No HITS result produced
[2026-03-05 08:08:00]  *** Contents of shared directory: ***
[2026-03-05 08:08:00] total 431528
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc 441130723 Mar  5 08:00 ATLAS.root_0
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc     15845 Mar  5 08:00 start_atlas.sh
[2026-03-05 08:08:00] -rw-r--r--. 2 boinc boinc    597951 Mar  5 08:00 input.tar.gz
[2026-03-05 08:08:00] -rw-------. 1 boinc boinc    133120 Mar  5 08:07 result.tar.gz
08:08:01 (2064833): run_atlas exited; CPU time 27.078336
08:08:01 (2064833): called boinc_finish(0)

</stderr_txt>
]]>

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