Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:49 (898398): wrapper (7.7.26015): starting
06:25:49 (898398): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 06:25:49] Arguments: --nthreads 8
[2026-03-05 06:25:49] Threads: 8
[2026-03-05 06:25:49] Checking for CVMFS
[2026-03-05 06:25:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 06:25:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 06:25:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 06:25:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 06:25:51] 2.11.3.0 253229 135971 217908 156922 1 228 39171641 45568000 13355 130560 0 782267429 99.807 447544192 17216 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-05 06:25:51] CVMFS is ok
[2026-03-05 06:25:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 06:25:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 06:25:51] Further information can be found at the LHC@home message board.
[2026-03-05 06:25:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 06:25:51] Checking for apptainer binary...
[2026-03-05 06:25:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 06:25:51] Running /usr/bin/apptainer --version
[2026-03-05 06:25:52] apptainer version 1.4.1-1.el9
[2026-03-05 06:25:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 06:25:53] wns0023.triumf.lcg
[2026-03-05 06:25:53] apptainer works
[2026-03-05 06:25:53] Set ATHENA_PROC_NUMBER=8
[2026-03-05 06:25:53] Set ATHENA_CORE_NUMBER=8
[2026-03-05 06:25:53] Starting ATLAS job with PandaID=7038618751
[2026-03-05 06:25:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 06:36:31]  *** The last 200 lines of the pilot log: ***
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | WARNING  | wrong length of table data, x=[1772721075.0, 1772721136.0, 1772721197.0], y=[13853.0, 462079.0, 611822.0] (must be same and length>=4)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . Timing measurements:
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . get job = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . initial setup = 69 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload setup = 95 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-in = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload execution = 209 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-out = 3 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . log creation = 0 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 06:36:31] 2026-03-05 14:35:54,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618751/pilotlog.txt
[2026-03-05 06:36:31] 2026-03-05 14:35:55,346 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 06:36:31] - Log from pilotlog.txt -
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038618751/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | extracted standard info from prmon json
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | WARNING  | wrong length of table data, x=[1772721075.0, 1772721136.0, 1772721197.0], y=[13853.0, 462079.0, 611822.0] (must be same and length>=4)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . Timing measurements:
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . get job = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . initial setup = 69 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload setup = 95 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-in = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload execution = 209 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-out = 3 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . log creation = 0 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 06:36:31] 2026-03-05 14:35:54,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618751/pilotlog.txt
[2026-03-05 06:36:31] 2026-03-05 14:35:55,347 | WARNING  | 
[2026-03-05 06:36:31] [begin log extracts]
[2026-03-05 06:36:31] - Log from pilotlog.txt -
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038618751/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | extracted standard info from prmon json
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 06:36:31] 2026-03-05 14:35:54,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 06:36:31] 2026-03-05 14:35:54,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | WARNING  | wrong length of table data, x=[1772721075.0, 1772721136.0, 1772721197.0], y=[13853.0, 462079.0, 611822.0] (must be same and length>=4)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,907 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . Timing measurements:
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . get job = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . initial setup = 69 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload setup = 95 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-in = 1 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . payload execution = 209 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . stage-out = 3 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | . log creation = 0 s
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | ..............................
[2026-03-05 06:36:31] 2026-03-05 14:35:54,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 06:36:31] 2026-03-05 14:35:54,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038618751/pilotlog.txt
[2026-03-05 06:36:31] [end log extracts]
[2026-03-05 06:36:31] 2026-03-05 14:35:55,347 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 06:36:31] 2026-03-05 14:35:55,347 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 06:36:31] 2026-03-05 14:35:56,063 | INFO     | 
[2026-03-05 06:36:31] 2026-03-05 14:35:56,063 | INFO     | job summary report
[2026-03-05 06:36:31] 2026-03-05 14:35:56,063 | INFO     | --------------------------------------------------
[2026-03-05 06:36:31] 2026-03-05 14:35:56,063 | INFO     | PanDA job id: 7038618751
[2026-03-05 06:36:31] 2026-03-05 14:35:56,063 | INFO     | task id: 48955010
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 06:33:31,941 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | pilot state: failed 
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | transexitcode: 65
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | exeerrorcode: 65
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 06:36:31] 2026-03-05 14:35:56,072 | INFO     | exitcode: 65
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | cpuconsumptiontime: 16 s
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | nevents: 0
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | neventsw: 0
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | pid: 907820
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | pgrp: 907820
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | corecount: 8
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | event service: False
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | sizes: {0: 2294660, 1: 2295258, 2: 2295342, 3: 2295398, 4: 2295398, 5: 2296015, 17: 2296015, 309: 2319419, 313: 2323711, 316: 2323767, 434: 2323961}
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | --------------------------------------------------
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | 
[2026-03-05 06:36:31] 2026-03-05 14:35:56,073 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 06:36:31] 2026-03-05 14:35:56,532 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | job 7038618751 has completed (purged errors)
[2026-03-05 06:36:31] 2026-03-05 14:35:56,534 | INFO     | overall cleanup function is called
[2026-03-05 06:36:31] 2026-03-05 14:35:57,549 | INFO     | --- collectZombieJob: --- 10, [907820]
[2026-03-05 06:36:31] 2026-03-05 14:35:57,549 | INFO     | zombie collector waiting for pid 907820
[2026-03-05 06:36:31] 2026-03-05 14:35:57,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 06:36:31] 2026-03-05 14:35:57,549 | INFO     | collected zombie processes
[2026-03-05 06:36:31] 2026-03-05 14:35:57,549 | INFO     | will attempt to kill all subprocesses of pid=907820
[2026-03-05 06:36:31] 2026-03-05 14:35:58,689 | INFO     | process IDs to be killed: [907820] (in reverse order)
[2026-03-05 06:36:31] 2026-03-05 14:35:58,957 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 06:36:31] 2026-03-05 14:35:58,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 06:36:31] 2026-03-05 14:35:58,964 | INFO     | did not find any defunct processes belonging to 907820
[2026-03-05 06:36:31] 2026-03-05 14:35:58,969 | INFO     | did not find any defunct processes belonging to 907820
[2026-03-05 06:36:31] 2026-03-05 14:35:58,969 | INFO     | ready for new job
[2026-03-05 06:36:31] 2026-03-05 14:35:58,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 06:36:31] 2026-03-05 14:35:58,970 | INFO     | **************************************
[2026-03-05 06:36:31] 2026-03-05 14:35:58,970 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 06:36:31] 2026-03-05 14:35:58,970 | INFO     | **************************************
[2026-03-05 06:36:31] 2026-03-05 14:35:58,971 | INFO     | 
[2026-03-05 06:36:31] 2026-03-05 14:35:58,972 | INFO     | architecture information:
[2026-03-05 06:36:31] 2026-03-05 14:35:58,972 | INFO     | executing command: cat /etc/os-release
[2026-03-05 06:36:31] 2026-03-05 14:35:58,983 | INFO     | cat /etc/os-release:
[2026-03-05 06:36:31] NAME="CentOS Linux"
[2026-03-05 06:36:31] VERSION="7 (Core)"
[2026-03-05 06:36:31] ID="centos"
[2026-03-05 06:36:31] ID_LIKE="rhel fedora"
[2026-03-05 06:36:31] VERSION_ID="7"
[2026-03-05 06:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 06:36:31] ANSI_COLOR="0;31"
[2026-03-05 06:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 06:36:31] HOME_URL="https://www.centos.org/"
[2026-03-05 06:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 06:36:31] 
[2026-03-05 06:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 06:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 06:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 06:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 06:36:31] 
[2026-03-05 06:36:31] 2026-03-05 14:35:58,983 | INFO     | **************************************
[2026-03-05 06:36:31] 2026-03-05 14:35:59,487 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 06:36:31] 2026-03-05 14:35:59,570 | INFO     | sufficient remaining disk space (1439310020608 B)
[2026-03-05 06:36:31] 2026-03-05 14:35:59,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 06:36:31] 2026-03-05 14:35:59,570 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 06:36:31] 2026-03-05 14:35:59,570 | INFO     | update_server=False
[2026-03-05 06:36:31] 2026-03-05 14:35:59,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 06:36:31] 2026-03-05 14:35:59,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 06:36:31] 2026-03-05 14:36:00,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 06:36:31] 2026-03-05 14:36:00,020 | INFO     | aborting loop
[2026-03-05 06:36:31] 2026-03-05 14:36:00,533 | INFO     | all payload control threads have been joined
[2026-03-05 06:36:31] 2026-03-05 14:36:00,568 | INFO     | all data control threads have been joined
[2026-03-05 06:36:31] 2026-03-05 14:36:00,587 | INFO     | [job] retrieve thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:00,633 | INFO     | [job] validate thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:00,665 | INFO     | all job control threads have been joined
[2026-03-05 06:36:31] 2026-03-05 14:36:00,719 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:00,866 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:00,926 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:00,962 | INFO     | [payload] validate_post thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,026 | INFO     | [job] job monitor thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,035 | INFO     | [payload] failed_post thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 06:36:31] 2026-03-05 14:36:01,539 | INFO     | [payload] control thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,574 | INFO     | [data] control thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,578 | INFO     | [data] copytool_out thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,671 | INFO     | [job] control thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,690 | INFO     | [data] copytool_in thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:01,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:02,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 06:36:31] 2026-03-05 14:36:02,109 | INFO     | [job] queue monitor thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:06,031 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 06:36:31] 2026-03-05 14:36:23,403 | INFO     | [monitor] cgroup control has ended
[2026-03-05 06:36:31] 2026-03-05 14:36:23,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010913097536)>', '<ExcThread(monitor, started 140009994696448)>']
[2026-03-05 06:36:31] 2026-03-05 14:36:28,553 | INFO     | all workflow threads have been joined
[2026-03-05 06:36:31] 2026-03-05 14:36:28,553 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 06:36:31] 2026-03-05 14:36:28,553 | INFO     | traces error code: 0
[2026-03-05 06:36:31] 2026-03-05 14:36:28,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 06:36:31] 2026-03-05 14:36:29,415 | INFO     | PID=902309 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 06:36:31] 2026-03-05 14:36:29,415 | INFO     | .. there are 26 such processes running
[2026-03-05 06:36:31] 2026-03-05 14:36:29,415 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 06:36:31] 2026-03-05 14:36:29,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 06:36:31] 2026-03-05 14:36:29,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 06:36:31] 2026-03-05 14:36:29,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 06:36:31] 2026-03-05 14:36:29,416 | INFO     | [monitor] control thread has ended
[2026-03-05 06:36:31] 2026-03-05 14:36:29,964 [wrapper] ==== pilot stdout END ====
[2026-03-05 06:36:31] 2026-03-05 14:36:29,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 06:36:31] 2026-03-05 14:36:30,025 [wrapper] pilotpid: 902309
[2026-03-05 06:36:31] 2026-03-05 14:36:30,058 [wrapper] Pilot exit status: 0
[2026-03-05 06:36:31] 2026-03-05 14:36:30,248 [wrapper] pandaids: 7038618751
[2026-03-05 06:36:31] 2026-03-05 14:36:30,598 [wrapper] cleanup supervisor_pilot  902315 902310
[2026-03-05 06:36:31] 2026-03-05 14:36:30,628 [wrapper] Test setup, not cleaning
[2026-03-05 06:36:31] 2026-03-05 14:36:30,715 [wrapper] apfmon messages muted
[2026-03-05 06:36:31] 2026-03-05 14:36:30,763 [wrapper] ==== wrapper stdout END ====
[2026-03-05 06:36:31] 2026-03-05 14:36:30,820 [wrapper] ==== wrapper stderr END ====
[2026-03-05 06:36:31]  *** Error codes and diagnostics ***
[2026-03-05 06:36:31]     "exeErrorCode": 65,
[2026-03-05 06:36:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 06:36:31]     "pilotErrorCode": 1305,
[2026-03-05 06:36:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 06:36:31]  *** Listing of results directory ***
[2026-03-05 06:36:31] total 428576
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc      5111 Mar  5 02:54 queuedata.json
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc    584627 Mar  5 02:54 pilot3.tar.gz
[2026-03-05 06:36:31] -rwx------. 1 boinc boinc     36322 Mar  5 02:55 runpilot2-wrapper.sh
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc       100 Mar  5 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 06:36:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 06:25 run_atlas
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc       105 Mar  5 06:25 job.xml
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc      6444 Mar  5 06:25 init_data.xml
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc 434659519 Mar  5 06:25 EVNT.46701403._001096.pool.root.1
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc     15845 Mar  5 06:25 start_atlas.sh
[2026-03-05 06:36:31] drwxrwx--x. 2 boinc boinc      4096 Mar  5 06:25 shared
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc    597953 Mar  5 06:25 input.tar.gz
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc         0 Mar  5 06:25 boinc_lockfile
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc      2561 Mar  5 06:25 pandaJob.out
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc   1521291 Mar  5 06:27 agis_ddmendpoints.agis.ALL.json
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc       442 Mar  5 06:28 workernode_map.json
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc    998460 Mar  5 06:28 agis_schedconf.cvmfs.json
[2026-03-05 06:36:31] drwx------. 5 boinc boinc      4096 Mar  5 06:28 pilot3
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc       525 Mar  5 06:33 boinc_task_state.xml
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc       987 Mar  5 06:33 memory_monitor_summary.json
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc     25193 Mar  5 06:33 log.48955010._004781.job.log.tgz.1
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc        95 Mar  5 06:35 pilot_heartbeat.json
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc      7059 Mar  5 06:35 heartbeat.json
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc        23 Mar  5 06:36 wrapper_checkpoint.txt
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc      8192 Mar  5 06:36 boinc_mmap_file
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc       822 Mar  5 06:36 pilotlog.txt
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc    113265 Mar  5 06:36 log.48955010._004781.job.log.1
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc       188 Mar  5 06:36 output.list
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc       620 Mar  5 06:36 runtime_log
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc    153600 Mar  5 06:36 result.tar.gz
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc      8633 Mar  5 06:36 runtime_log.err
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc       643 Mar  5 06:36 qfONDmKXLI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBbNLDmJnvzvm.diag
[2026-03-05 06:36:31] -rw-r--r--. 1 boinc boinc     21902 Mar  5 06:36 stderr.txt
[2026-03-05 06:36:31] No HITS result produced
[2026-03-05 06:36:31]  *** Contents of shared directory: ***
[2026-03-05 06:36:31] total 425228
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc 434659519 Mar  5 06:25 ATLAS.root_0
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc     15845 Mar  5 06:25 start_atlas.sh
[2026-03-05 06:36:31] -rw-r--r--. 2 boinc boinc    597953 Mar  5 06:25 input.tar.gz
[2026-03-05 06:36:31] -rw-------. 1 boinc boinc    153600 Mar  5 06:36 result.tar.gz
06:36:33 (898398): run_atlas exited; CPU time 32.904668
06:36:33 (898398): called boinc_finish(0)

</stderr_txt>
]]>

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