Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:30:46 (892011): wrapper (7.7.26015): starting
02:30:46 (892011): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 02:30:46] Arguments: --nthreads 12
[2026-03-08 02:30:46] Threads: 12
[2026-03-08 02:30:46] Checking for CVMFS
[2026-03-08 02:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 02:30:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 02:30:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 02:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 02:30:48] 2.13.3.0 450165 4727 47804 157023 3 49 2752309 4096000 912 130560 0 1324384 99.974 185633 4047 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-08 02:30:48] CVMFS is ok
[2026-03-08 02:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 02:30:48] Checking for apptainer binary...
[2026-03-08 02:30:48] apptainer is not installed, using version from CVMFS
[2026-03-08 02:30:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 02:30:48] g630
[2026-03-08 02:30:48] apptainer works
[2026-03-08 02:30:48] Set ATHENA_PROC_NUMBER=12
[2026-03-08 02:30:48] Set ATHENA_CORE_NUMBER=12
[2026-03-08 02:30:48] Starting ATLAS job with PandaID=7038572870
[2026-03-08 02:30:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 06:57:59]  *** The last 200 lines of the pilot log: ***
[2026-03-08 06:57:59] 2026-03-08 06:57:25,215 | INFO     | time since job start (15966s) is within the limit (349056.0s)
[2026-03-08 06:57:59] 2026-03-08 06:57:25,975 | INFO     | job 7038572870 has state=finished
[2026-03-08 06:57:59] 2026-03-08 06:57:25,975 | INFO     | preparing for final server update for job 7038572870 in state='finished'
[2026-03-08 06:57:59] 2026-03-08 06:57:25,975 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7038572870/jobReport.json
[2026-03-08 06:57:59] 2026-03-08 06:57:25,976 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/0/workernode_map.json
[2026-03-08 06:57:59] 2026-03-08 06:57:25,977 | INFO     | this job has now completed (state=finished)
[2026-03-08 06:57:59] 2026-03-08 06:57:25,977 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 06:57:59] 2026-03-08 06:57:25,977 | INFO     | log transfer has been attempted: DONE
[2026-03-08 06:57:59] 2026-03-08 06:57:25,977 | INFO     | job 7038572870 has finished - writing final server update
[2026-03-08 06:57:59] 2026-03-08 06:57:25,977 | INFO     | total number of processed events: 400 (read)
[2026-03-08 06:57:59] 2026-03-08 06:57:25,978 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7038572870/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 06:57:59] 2026-03-08 06:57:25,978 | INFO     | extracted standard info from prmon json
[2026-03-08 06:57:59] 2026-03-08 06:57:25,978 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 06:57:59] 2026-03-08 06:57:25,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 06:57:59] 2026-03-08 06:57:25,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 06:57:59] 2026-03-08 06:57:25,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 06:57:59] 2026-03-08 06:57:25,988 | INFO     | fitting pss+swap vs Time
[2026-03-08 06:57:59] 2026-03-08 06:57:25,991 | INFO     | sum of square deviations: 5576683165.5
[2026-03-08 06:57:59] 2026-03-08 06:57:25,996 | INFO     | sum of deviations: -1488581688.5000057
[2026-03-08 06:57:59] 2026-03-08 06:57:25,996 | INFO     | mean x: 1772945060.5
[2026-03-08 06:57:59] 2026-03-08 06:57:25,996 | INFO     | mean y: 2661344.2786259544
[2026-03-08 06:57:59] 2026-03-08 06:57:25,996 | INFO     | intersect: 475912822.5236177
[2026-03-08 06:57:59] 2026-03-08 06:57:25,998 | INFO     | chi2: 2.9615504865588185
[2026-03-08 06:57:59] 2026-03-08 06:57:26,000 | INFO     | sum of square deviations: 5263458688.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,005 | INFO     | sum of deviations: 15960142540.999979
[2026-03-08 06:57:59] 2026-03-08 06:57:26,005 | INFO     | mean x: 1772944908.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,005 | INFO     | mean y: 2669705.53307393
[2026-03-08 06:57:59] 2026-03-08 06:57:26,005 | INFO     | intersect: -5373349206.429192
[2026-03-08 06:57:59] 2026-03-08 06:57:26,005 | INFO     | chi2: 2.2645546302555326
[2026-03-08 06:57:59] 2026-03-08 06:57:26,006 | INFO     | current chi2=2.2645546302555326 (change=23.534829457294247 %)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,006 | INFO     | right removable region: 256
[2026-03-08 06:57:59] 2026-03-08 06:57:26,008 | INFO     | sum of square deviations: 5263458688.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | sum of deviations: -55743715704.99997
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | mean x: 1772945213.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | mean y: 2687601.618677043
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | intersect: 18779419741.52003
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | chi2: 1.1241220814783943
[2026-03-08 06:57:59] 2026-03-08 06:57:26,015 | INFO     | current chi2=1.1241220814783943 (change=62.04278513635704 %)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,018 | INFO     | sum of square deviations: 4962187923.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | sum of deviations: -65291039479.49997
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | mean x: 1772945365.5
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | mean y: 2692410.7023809524
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | intersect: 23330596885.523903
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | chi2: 1.0444984979168834
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | current chi2=1.0444984979168834 (change=7.083179387135032 %)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,021 | INFO     | left removable region: 20
[2026-03-08 06:57:59] 2026-03-08 06:57:26,025 | INFO     | sum of square deviations: 4075741535.0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,028 | INFO     | sum of deviations: -31208125270.999996
[2026-03-08 06:57:59] 2026-03-08 06:57:26,028 | INFO     | mean x: 1772945487.5
[2026-03-08 06:57:59] 2026-03-08 06:57:26,028 | INFO     | mean y: 2692678.940677966
[2026-03-08 06:57:59] 2026-03-08 06:57:26,028 | INFO     | intersect: 13578211243.454891
[2026-03-08 06:57:59] 2026-03-08 06:57:26,029 | INFO     | chi2: 0.25572868089050815
[2026-03-08 06:57:59] 2026-03-08 06:57:26,029 | INFO     | current memory leak: -7.66 B/s (using 236 data points, chi2=0.26)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,029 | INFO     | could have reported an average CPU frequency of 3403 MHz (12 samples)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,032 | INFO     | ..............................
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . Timing measurements:
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . get job = 0 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . initial setup = 11 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . payload setup = 10 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . stage-in = 0 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . payload execution = 15945 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . stage-out = 2 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | . log creation = 0 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,037 | INFO     | ..............................
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | 
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | job summary report
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | --------------------------------------------------
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | PanDA job id: 7038572870
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | task id: 48955006
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | errors: (none)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | pilot state: finished 
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | transexitcode: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,256 | INFO     | exeerrorcode: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | exeerrordiag: 
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | exitcode: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | exitmsg: OK
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | cpuconsumptiontime: 31696 s
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | nevents: 400
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | neventsw: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | pid: 900394
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | pgrp: 900394
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | corecount: 12
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | event service: False
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | sizes: {0: 2295391, 1: 2295852, 2: 2295852, 15959: 2327089, 15962: 2336189, 15965: 2336327}
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | --------------------------------------------------
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | 
[2026-03-08 06:57:59] 2026-03-08 06:57:26,257 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-03-08 06:57:59] 2026-03-08 06:57:26,301 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | job 7038572870 has completed (purged errors)
[2026-03-08 06:57:59] 2026-03-08 06:57:26,303 | INFO     | overall cleanup function is called
[2026-03-08 06:57:59] 2026-03-08 06:57:27,322 | INFO     | --- collectZombieJob: --- 10, [900394]
[2026-03-08 06:57:59] 2026-03-08 06:57:27,322 | INFO     | zombie collector waiting for pid 900394
[2026-03-08 06:57:59] 2026-03-08 06:57:27,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 06:57:59] 2026-03-08 06:57:27,322 | INFO     | collected zombie processes
[2026-03-08 06:57:59] 2026-03-08 06:57:27,322 | INFO     | will attempt to kill all subprocesses of pid=900394
[2026-03-08 06:57:59] 2026-03-08 06:57:27,487 | INFO     | process IDs to be killed: [900394] (in reverse order)
[2026-03-08 06:57:59] 2026-03-08 06:57:27,547 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 06:57:59] 2026-03-08 06:57:27,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 06:57:59] 2026-03-08 06:57:27,549 | INFO     | did not find any defunct processes belonging to 900394
[2026-03-08 06:57:59] 2026-03-08 06:57:27,554 | INFO     | did not find any defunct processes belonging to 900394
[2026-03-08 06:57:59] 2026-03-08 06:57:27,554 | INFO     | ready for new job
[2026-03-08 06:57:59] 2026-03-08 06:57:27,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 06:57:59] 2026-03-08 06:57:27,557 | INFO     | **************************************
[2026-03-08 06:57:59] 2026-03-08 06:57:27,558 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 06:57:59] 2026-03-08 06:57:27,558 | INFO     | **************************************
[2026-03-08 06:57:59] 2026-03-08 06:57:27,558 | INFO     | 
[2026-03-08 06:57:59] 2026-03-08 06:57:27,558 | INFO     | architecture information:
[2026-03-08 06:57:59] 2026-03-08 06:57:27,563 | INFO     | executing command: cat /etc/os-release
[2026-03-08 06:57:59] 2026-03-08 06:57:27,589 | INFO     | cat /etc/os-release:
[2026-03-08 06:57:59] NAME="CentOS Linux"
[2026-03-08 06:57:59] VERSION="7 (Core)"
[2026-03-08 06:57:59] ID="centos"
[2026-03-08 06:57:59] ID_LIKE="rhel fedora"
[2026-03-08 06:57:59] VERSION_ID="7"
[2026-03-08 06:57:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 06:57:59] ANSI_COLOR="0;31"
[2026-03-08 06:57:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 06:57:59] HOME_URL="https://www.centos.org/"
[2026-03-08 06:57:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 06:57:59] 
[2026-03-08 06:57:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 06:57:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 06:57:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 06:57:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 06:57:59] 
[2026-03-08 06:57:59] 2026-03-08 06:57:27,589 | INFO     | **************************************
[2026-03-08 06:57:59] 2026-03-08 06:57:28,092 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-03-08 06:57:59] 2026-03-08 06:57:28,125 | INFO     | sufficient remaining disk space (194062057472 B)
[2026-03-08 06:57:59] 2026-03-08 06:57:28,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 06:57:59] 2026-03-08 06:57:28,125 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 06:57:59] 2026-03-08 06:57:28,125 | INFO     | update_server=False
[2026-03-08 06:57:59] 2026-03-08 06:57:28,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 06:57:59] 2026-03-08 06:57:28,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 06:57:59] 2026-03-08 06:57:28,144 | INFO     | all payload control threads have been joined
[2026-03-08 06:57:59] 2026-03-08 06:57:28,184 | INFO     | all data control threads have been joined
[2026-03-08 06:57:59] 2026-03-08 06:57:28,421 | INFO     | all job control threads have been joined
[2026-03-08 06:57:59] 2026-03-08 06:57:28,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 06:57:59] 2026-03-08 06:57:28,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 06:57:59] 2026-03-08 06:57:28,681 | INFO     | aborting loop
[2026-03-08 06:57:59] 2026-03-08 06:57:29,132 | INFO     | [job] queue monitor thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,134 | INFO     | [job] retrieve thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,149 | INFO     | [payload] control thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,183 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,189 | INFO     | [data] control thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 06:57:59] 2026-03-08 06:57:29,290 | INFO     | [data] copytool_in thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,311 | INFO     | [payload] failed_post thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,426 | INFO     | [job] control thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,686 | INFO     | [job] job monitor thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:29,724 | INFO     | [payload] validate_post thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:30,041 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:30,107 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:30,408 | INFO     | [job] validate thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:30,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:30,554 | INFO     | [data] copytool_out thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:33,227 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 06:57:59] 2026-03-08 06:57:45,153 | INFO     | [monitor] cgroup control has ended
[2026-03-08 06:57:59] 2026-03-08 06:57:45,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500066961216)>', '<ExcThread(monitor, started 140499411248896)>']
[2026-03-08 06:57:59] 2026-03-08 06:57:50,938 | INFO     | all workflow threads have been joined
[2026-03-08 06:57:59] 2026-03-08 06:57:50,938 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 06:57:59] 2026-03-08 06:57:50,938 | INFO     | traces error code: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:50,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | INFO     | PID=896018 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | INFO     | .. there are 2 such processes running
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | CRITICAL | thread 'MainThread' is not alive
[2026-03-08 06:57:59] 2026-03-08 06:57:58,503 | INFO     | [monitor] control thread has ended
[2026-03-08 06:57:59] 2026-03-08 06:57:58,756 [wrapper] ==== pilot stdout END ====
[2026-03-08 06:57:59] 2026-03-08 06:57:58,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 06:57:59] 2026-03-08 06:57:58,776 [wrapper] pilotpid: 896018
[2026-03-08 06:57:59] 2026-03-08 06:57:58,789 [wrapper] Pilot exit status: 0
[2026-03-08 06:57:59] 2026-03-08 06:57:58,812 [wrapper] pandaids: 7038572870
[2026-03-08 06:57:59] 2026-03-08 06:57:58,850 [wrapper] cleanup supervisor_pilot  919704 896019
[2026-03-08 06:57:59] 2026-03-08 06:57:58,851 [wrapper] Test setup, not cleaning
[2026-03-08 06:57:59] 2026-03-08 06:57:58,863 [wrapper] apfmon messages muted
[2026-03-08 06:57:59] 2026-03-08 06:57:58,876 [wrapper] ==== wrapper stdout END ====
[2026-03-08 06:57:59] 2026-03-08 06:57:58,892 [wrapper] ==== wrapper stderr END ====
[2026-03-08 06:57:59]  *** Error codes and diagnostics ***
[2026-03-08 06:57:59]     "exeErrorCode": 0,
[2026-03-08 06:57:59]     "exeErrorDiag": "",
[2026-03-08 06:57:59]     "pilotErrorCode": 0,
[2026-03-08 06:57:59]     "pilotErrorDiag": "",
[2026-03-08 06:57:59]  *** Listing of results directory ***
[2026-03-08 06:57:59] total 615424
[2026-03-08 06:57:59] -rw-r--r-- 1 boinc boinc      5111 Mar  5 06:14 queuedata.json
[2026-03-08 06:57:59] -rw-r--r-- 1 boinc boinc    584627 Mar  5 06:14 pilot3.tar.gz
[2026-03-08 06:57:59] -rwx------ 1 boinc boinc     36322 Mar  5 06:14 runpilot2-wrapper.sh
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc       100 Mar  8 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 06:57:59] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 02:30 run_atlas
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc       105 Mar  8 02:30 job.xml
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc 439962409 Mar  8 02:30 EVNT.46701403._000073.pool.root.1
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc     15845 Mar  8 02:30 start_atlas.sh
[2026-03-08 06:57:59] drwxrwx--x 2 boinc boinc      4096 Mar  8 02:30 shared
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc    597953 Mar  8 02:30 input.tar.gz
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc      9312 Mar  8 02:30 init_data.xml
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc         0 Mar  8 02:30 boinc_setup_complete
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc         0 Mar  8 02:30 boinc_lockfile
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc      2562 Mar  8 02:30 pandaJob.out
[2026-03-08 06:57:59] -rw------- 1 boinc boinc    999177 Mar  8 02:31 agis_schedconf.cvmfs.json
[2026-03-08 06:57:59] -rw------- 1 boinc boinc       415 Mar  8 02:31 workernode_map.json
[2026-03-08 06:57:59] drwx------ 5 boinc boinc      4096 Mar  8 02:31 pilot3
[2026-03-08 06:57:59] -rw------- 1 boinc boinc 180578226 Mar  8 06:56 HITS.48955006._003630.pool.root.1
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc       531 Mar  8 06:56 boinc_task_state.xml
[2026-03-08 06:57:59] -rw------- 1 boinc boinc        95 Mar  8 06:57 pilot_heartbeat.json
[2026-03-08 06:57:59] -rw------- 1 boinc boinc      1022 Mar  8 06:57 memory_monitor_summary.json
[2026-03-08 06:57:59] -rw------- 1 boinc boinc   1521291 Mar  8 06:57 agis_ddmendpoints.agis.ALL.json
[2026-03-08 06:57:59] -rw------- 1 boinc boinc    568441 Mar  8 06:57 log.48955006._003630.job.log.tgz.1
[2026-03-08 06:57:59] -rw------- 1 boinc boinc      6299 Mar  8 06:57 heartbeat.json
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc        28 Mar  8 06:57 wrapper_checkpoint.txt
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc      8192 Mar  8 06:57 boinc_mmap_file
[2026-03-08 06:57:59] -rw------- 1 boinc boinc       891 Mar  8 06:57 pilotlog.txt
[2026-03-08 06:57:59] -rw------- 1 boinc boinc   2287980 Mar  8 06:57 log.48955006._003630.job.log.1
[2026-03-08 06:57:59] -rw------- 1 boinc boinc       357 Mar  8 06:57 output.list
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc       620 Mar  8 06:57 runtime_log
[2026-03-08 06:57:59] -rw------- 1 boinc boinc   2877440 Mar  8 06:57 result.tar.gz
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc      9147 Mar  8 06:57 runtime_log.err
[2026-03-08 06:57:59] -rw------- 1 boinc boinc       651 Mar  8 06:57 XvNMDmv9GI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmezMLDmawfXwn.diag
[2026-03-08 06:57:59] -rw-rw-r-- 1 boinc boinc     21055 Mar  8 06:57 stderr.txt
[2026-03-08 06:57:59] HITS file was successfully produced:
[2026-03-08 06:57:59] -rw------- 1 boinc boinc 180578226 Mar  8 06:56 shared/HITS.pool.root.1
[2026-03-08 06:57:59]  *** Contents of shared directory: ***
[2026-03-08 06:57:59] total 609420
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc 439962409 Mar  8 02:30 ATLAS.root_0
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc     15845 Mar  8 02:30 start_atlas.sh
[2026-03-08 06:57:59] -rw-r--r-- 2 boinc boinc    597953 Mar  8 02:30 input.tar.gz
[2026-03-08 06:57:59] -rw------- 1 boinc boinc 180578226 Mar  8 06:56 HITS.pool.root.1
[2026-03-08 06:57:59] -rw------- 1 boinc boinc   2877440 Mar  8 06:57 result.tar.gz
06:58:00 (892011): run_atlas exited; CPU time 31777.458770
06:58:00 (892011): called boinc_finish(0)

</stderr_txt>
]]>

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