Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:05:43 (1108681): wrapper (7.7.26015): starting
06:05:43 (1108681): wrapper: running run_atlas (--nthreads 9)
[2026-03-05 06:05:43] Arguments: --nthreads 9
[2026-03-05 06:05:43] Threads: 9
[2026-03-05 06:05:43] Checking for CVMFS
[2026-03-05 06:05:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 06:05:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 06:05:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 06:05:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 06:05:46] 2.13.3.0 13172 172528 678968 156916 1 929 23117996 32935936 32110 16776704 0 640245388 99.471 882826929 34258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-05 06:05:46] CVMFS is ok
[2026-03-05 06:05:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 06:05:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 06:05:46] Further information can be found at the LHC@home message board.
[2026-03-05 06:05:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 06:05:46] Checking for apptainer binary...
[2026-03-05 06:05:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 06:05:46] Running /usr/bin/apptainer --version
[2026-03-05 06:05:46] apptainer version 1.4.5-2.el9
[2026-03-05 06:05:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 06:05:46] c6-6-8-3.aglt2.org
[2026-03-05 06:05:46] apptainer works
[2026-03-05 06:05:47] Set ATHENA_PROC_NUMBER=9
[2026-03-05 06:05:47] Set ATHENA_CORE_NUMBER=9
[2026-03-05 06:05:47] Starting ATLAS job with PandaID=7041271978
[2026-03-05 06:05:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 10:07:17]  *** The last 200 lines of the pilot log: ***
[2026-03-05 10:07:17] 2026-03-05 15:06:20,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:07:17] 2026-03-05 15:06:20,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:07:17] 2026-03-05 15:06:20,567 | INFO     | fitting pss+swap vs Time
[2026-03-05 10:07:17] 2026-03-05 15:06:20,568 | INFO     | sum of square deviations: 3922417498.197419
[2026-03-05 10:07:17] 2026-03-05 15:06:20,570 | INFO     | sum of deviations: 66782019589.403404
[2026-03-05 10:07:17] 2026-03-05 15:06:20,570 | INFO     | mean x: 1772716030.4849784
[2026-03-05 10:07:17] 2026-03-05 15:06:20,570 | INFO     | mean y: 2546524.686695279
[2026-03-05 10:07:17] 2026-03-05 15:06:20,570 | INFO     | intersect: -30179237216.769276
[2026-03-05 10:07:17] 2026-03-05 15:06:20,574 | INFO     | chi2: 3.1499754326002307
[2026-03-05 10:07:17] 2026-03-05 15:06:20,575 | INFO     | sum of square deviations: 3675321746.9956164
[2026-03-05 10:07:17] 2026-03-05 15:06:20,576 | INFO     | sum of deviations: 64884415767.206215
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | mean x: 1772715877.995614
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | mean y: 2545353.206140351
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | intersect: -31293118532.28079
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | chi2: 3.152784675541839
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | current chi2=3.152784675541839 (change=-0.08918301116047948 %)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,577 | INFO     | right removable region: 227
[2026-03-05 10:07:17] 2026-03-05 15:06:20,578 | INFO     | sum of square deviations: 3675252816.9956164
[2026-03-05 10:07:17] 2026-03-05 15:06:20,583 | INFO     | sum of deviations: 1310378067.1140394
[2026-03-05 10:07:17] 2026-03-05 15:06:20,583 | INFO     | mean x: 1772716182.995614
[2026-03-05 10:07:17] 2026-03-05 15:06:20,584 | INFO     | mean y: 2586799.1140350876
[2026-03-05 10:07:17] 2026-03-05 15:06:20,584 | INFO     | intersect: -629459082.1035947
[2026-03-05 10:07:17] 2026-03-05 15:06:20,584 | INFO     | chi2: 0.20265760493927398
[2026-03-05 10:07:17] 2026-03-05 15:06:20,584 | INFO     | current chi2=0.20265760493927398 (change=93.5663750630593 %)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,585 | INFO     | sum of square deviations: 3438720679.7488847
[2026-03-05 10:07:17] 2026-03-05 15:06:20,586 | INFO     | sum of deviations: -12327140846.273544
[2026-03-05 10:07:17] 2026-03-05 15:06:20,590 | INFO     | mean x: 1772716335.497758
[2026-03-05 10:07:17] 2026-03-05 15:06:20,590 | INFO     | mean y: 2595566.452914798
[2026-03-05 10:07:17] 2026-03-05 15:06:20,591 | INFO     | intersect: 6357436794.722309
[2026-03-05 10:07:17] 2026-03-05 15:06:20,591 | INFO     | chi2: 0.07006191024715402
[2026-03-05 10:07:17] 2026-03-05 15:06:20,591 | INFO     | current chi2=0.07006191024715402 (change=65.42843271628126 %)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,591 | INFO     | sum of square deviations: 3212533745.981658
[2026-03-05 10:07:17] 2026-03-05 15:06:20,593 | INFO     | sum of deviations: -15894628789.0367
[2026-03-05 10:07:17] 2026-03-05 15:06:20,593 | INFO     | mean x: 1772716488.0091743
[2026-03-05 10:07:17] 2026-03-05 15:06:20,593 | INFO     | mean y: 2597919.018348624
[2026-03-05 10:07:17] 2026-03-05 15:06:20,593 | INFO     | intersect: 8773453808.191483
[2026-03-05 10:07:17] 2026-03-05 15:06:20,593 | INFO     | chi2: 0.020743682621441408
[2026-03-05 10:07:17] 2026-03-05 15:06:20,594 | INFO     | current chi2=0.020743682621441408 (change=70.39235363656954 %)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,594 | INFO     | sum of square deviations: 2996499591.192468
[2026-03-05 10:07:17] 2026-03-05 15:06:20,599 | INFO     | sum of deviations: -13490735099.103283
[2026-03-05 10:07:17] 2026-03-05 15:06:20,599 | INFO     | mean x: 1772716640.5164318
[2026-03-05 10:07:17] 2026-03-05 15:06:20,600 | INFO     | mean y: 2596218.600938967
[2026-03-05 10:07:17] 2026-03-05 15:06:20,600 | INFO     | intersect: 7983658746.783137
[2026-03-05 10:07:17] 2026-03-05 15:06:20,600 | INFO     | chi2: 0.019363976306077255
[2026-03-05 10:07:17] 2026-03-05 15:06:20,600 | INFO     | current chi2=0.019363976306077255 (change=6.651212036661414 %)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,600 | INFO     | left removable region: 40
[2026-03-05 10:07:17] 2026-03-05 15:06:20,601 | INFO     | sum of square deviations: 2027706368.449204
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | sum of deviations: -4373220997.203205
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | mean x: 1772717067.540107
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | mean y: 2588433.1604278074
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | intersect: 3825865620.8708014
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | chi2: 0.0074313451632545035
[2026-03-05 10:07:17] 2026-03-05 15:06:20,602 | INFO     | current memory leak: -2.16 B/s (using 187 data points, chi2=0.01)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,603 | INFO     | could have reported an average CPU frequency of 2683 MHz (11 samples)
[2026-03-05 10:07:17] 2026-03-05 15:06:20,611 | INFO     | ..............................
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . Timing measurements:
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . get job = 0 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . initial setup = 42 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . payload setup = 44 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . stage-in = 0 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . payload execution = 14241 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . stage-out = 6 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | . log creation = 1 s
[2026-03-05 10:07:17] 2026-03-05 15:06:20,612 | INFO     | ..............................
[2026-03-05 10:07:17] 2026-03-05 15:06:21,132 | INFO     | 
[2026-03-05 10:07:17] 2026-03-05 15:06:21,132 | INFO     | job summary report
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | --------------------------------------------------
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | PanDA job id: 7041271978
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | task id: 48958651
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | errors: (none)
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | pilot state: finished 
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | transexitcode: 0
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | exeerrorcode: 0
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | exeerrordiag: 
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | exitcode: 0
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | exitmsg: OK
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | cpuconsumptiontime: 37592 s
[2026-03-05 10:07:17] 2026-03-05 15:06:21,133 | INFO     | nevents: 400
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | neventsw: 0
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | pid: 1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | pgrp: 1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | corecount: 9
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | event service: False
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | sizes: {0: 2294761, 1: 2295362, 2: 2295474, 3: 2295474, 4: 2295963, 15: 2295963, 14290: 2326820, 14292: 2326819, 14299: 2335873, 14301: 2335929, 14302: 2336123}
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | --------------------------------------------------
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | 
[2026-03-05 10:07:17] 2026-03-05 15:06:21,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 10:07:17] 2026-03-05 15:06:21,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,339 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 10:07:17] 2026-03-05 15:06:21,339 | INFO     | job 7041271978 has completed (purged errors)
[2026-03-05 10:07:17] 2026-03-05 15:06:21,339 | INFO     | overall cleanup function is called
[2026-03-05 10:07:17] 2026-03-05 15:06:22,369 | INFO     | --- collectZombieJob: --- 10, [1120435]
[2026-03-05 10:07:17] 2026-03-05 15:06:22,369 | INFO     | zombie collector waiting for pid 1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:22,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 10:07:17] 2026-03-05 15:06:22,370 | INFO     | collected zombie processes
[2026-03-05 10:07:17] 2026-03-05 15:06:22,370 | INFO     | will attempt to kill all subprocesses of pid=1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:26,302 | INFO     | process IDs to be killed: [1120435] (in reverse order)
[2026-03-05 10:07:17] 2026-03-05 15:06:26,701 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 10:07:17] 2026-03-05 15:06:26,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 10:07:17] 2026-03-05 15:06:26,735 | INFO     | did not find any defunct processes belonging to 1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:26,754 | INFO     | did not find any defunct processes belonging to 1120435
[2026-03-05 10:07:17] 2026-03-05 15:06:26,755 | INFO     | ready for new job
[2026-03-05 10:07:17] 2026-03-05 15:06:26,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 10:07:17] 2026-03-05 15:06:26,757 | INFO     | **************************************
[2026-03-05 10:07:17] 2026-03-05 15:06:26,757 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 10:07:17] 2026-03-05 15:06:26,758 | INFO     | **************************************
[2026-03-05 10:07:17] 2026-03-05 15:06:26,758 | INFO     | 
[2026-03-05 10:07:17] 2026-03-05 15:06:26,800 | INFO     | architecture information:
[2026-03-05 10:07:17] 2026-03-05 15:06:26,804 | INFO     | executing command: cat /etc/os-release
[2026-03-05 10:07:17] 2026-03-05 15:06:26,950 | INFO     | cat /etc/os-release:
[2026-03-05 10:07:17] NAME="CentOS Linux"
[2026-03-05 10:07:17] VERSION="7 (Core)"
[2026-03-05 10:07:17] ID="centos"
[2026-03-05 10:07:17] ID_LIKE="rhel fedora"
[2026-03-05 10:07:17] VERSION_ID="7"
[2026-03-05 10:07:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 10:07:17] ANSI_COLOR="0;31"
[2026-03-05 10:07:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 10:07:17] HOME_URL="https://www.centos.org/"
[2026-03-05 10:07:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 10:07:17] 
[2026-03-05 10:07:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 10:07:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 10:07:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 10:07:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 10:07:17] 
[2026-03-05 10:07:17] 2026-03-05 15:06:26,951 | INFO     | **************************************
[2026-03-05 10:07:17] 2026-03-05 15:06:27,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-05 10:07:17] 2026-03-05 15:06:27,569 | INFO     | sufficient remaining disk space (92816801792 B)
[2026-03-05 10:07:17] 2026-03-05 15:06:27,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 10:07:17] 2026-03-05 15:06:27,569 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 10:07:17] 2026-03-05 15:06:27,569 | INFO     | update_server=False
[2026-03-05 10:07:17] 2026-03-05 15:06:27,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 10:07:17] 2026-03-05 15:06:27,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:07:17] 2026-03-05 15:06:27,570 | INFO     | aborting loop
[2026-03-05 10:07:17] 2026-03-05 15:06:27,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 10:07:17] 2026-03-05 15:06:27,810 | INFO     | all data control threads have been joined
[2026-03-05 10:07:17] 2026-03-05 15:06:28,419 | INFO     | all job control threads have been joined
[2026-03-05 10:07:17] 2026-03-05 15:06:28,576 | INFO     | [job] retrieve thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:28,590 | INFO     | [job] job monitor thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:28,624 | INFO     | all payload control threads have been joined
[2026-03-05 10:07:17] 2026-03-05 15:06:28,739 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:28,817 | INFO     | [data] control thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:28,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 10:07:17] 2026-03-05 15:06:29,184 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,310 | INFO     | [job] validate thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,424 | INFO     | [job] control thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,630 | INFO     | [payload] control thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,740 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:29,796 | INFO     | [data] copytool_in thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:30,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:07:17] 2026-03-05 15:06:30,135 | INFO     | [payload] failed_post thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:30,136 | INFO     | [payload] validate_post thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:30,952 | INFO     | [data] copytool_out thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:31,048 | INFO     | [job] queue monitor thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:31,583 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 10:07:17] 2026-03-05 15:06:55,009 | INFO     | PID=1113800 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 10:07:17] 2026-03-05 15:06:55,010 | INFO     | .. there are 44 such processes running
[2026-03-05 10:07:17] 2026-03-05 15:06:55,010 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 10:07:17] 2026-03-05 15:06:55,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 10:07:17] 2026-03-05 15:06:55,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 10:07:17] 2026-03-05 15:06:57,211 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-03-05 10:07:17] 2026-03-05 15:07:08,529 | INFO     | [monitor] cgroup control has ended
[2026-03-05 10:07:17] 2026-03-05 15:07:09,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683221653312)>', '<ExcThread(monitor, started 139682553763584)>']
[2026-03-05 10:07:17] 2026-03-05 15:07:10,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 10:07:17] 2026-03-05 15:07:10,099 | INFO     | [monitor] control thread has ended
[2026-03-05 10:07:17] 2026-03-05 15:07:14,910 | INFO     | all workflow threads have been joined
[2026-03-05 10:07:17] 2026-03-05 15:07:14,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 10:07:17] 2026-03-05 15:07:14,911 | INFO     | traces error code: 0
[2026-03-05 10:07:17] 2026-03-05 15:07:14,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 10:07:17] 2026-03-05 15:07:16,386 [wrapper] ==== pilot stdout END ====
[2026-03-05 10:07:17] 2026-03-05 15:07:16,403 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 10:07:17] 2026-03-05 15:07:16,441 [wrapper] pilotpid: 1113800
[2026-03-05 10:07:17] 2026-03-05 15:07:16,456 [wrapper] Pilot exit status: 0
[2026-03-05 10:07:17] 2026-03-05 15:07:16,563 [wrapper] pandaids: 7041271978
[2026-03-05 10:07:17] 2026-03-05 15:07:16,831 [wrapper] cleanup supervisor_pilot 1981519 1113801
[2026-03-05 10:07:17] 2026-03-05 15:07:16,847 [wrapper] Test setup, not cleaning
[2026-03-05 10:07:17] 2026-03-05 15:07:16,866 [wrapper] apfmon messages muted
[2026-03-05 10:07:17] 2026-03-05 15:07:16,903 [wrapper] ==== wrapper stdout END ====
[2026-03-05 10:07:17] 2026-03-05 15:07:16,922 [wrapper] ==== wrapper stderr END ====
[2026-03-05 10:07:17]  *** Error codes and diagnostics ***
[2026-03-05 10:07:17]     "exeErrorCode": 0,
[2026-03-05 10:07:17]     "exeErrorDiag": "",
[2026-03-05 10:07:17]     "pilotErrorCode": 0,
[2026-03-05 10:07:17]     "pilotErrorDiag": "",
[2026-03-05 10:07:17]  *** Listing of results directory ***
[2026-03-05 10:07:17] total 432204
[2026-03-05 10:07:17] -rwx------. 1 boincer umatlas     36322 Mar  5 01:59 runpilot2-wrapper.sh
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas    584627 Mar  5 01:59 pilot3.tar.gz
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas      5111 Mar  5 01:59 queuedata.json
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas       100 Mar  5 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 10:07:17] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  5 06:05 run_atlas
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas       105 Mar  5 06:05 job.xml
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas 263204146 Mar  5 06:05 EVNT.48958649._000022.pool.root.1
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 06:05 start_atlas.sh
[2026-03-05 10:07:17] drwxrwx--x. 2 boincer umatlas      4096 Mar  5 06:05 shared
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas    597981 Mar  5 06:05 input.tar.gz
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas         0 Mar  5 06:05 boinc_lockfile
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas      2618 Mar  5 06:05 pandaJob.out
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas        57 Mar  5 06:05 setup.sh.local
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas    998505 Mar  5 06:07 agis_schedconf.cvmfs.json
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas       442 Mar  5 06:07 workernode_map.json
[2026-03-05 10:07:17] drwx------. 5 boincer umatlas      4096 Mar  5 06:07 pilot3
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas      6877 Mar  5 10:03 init_data.xml
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas 171126784 Mar  5 10:05 HITS.48958651._000523.pool.root.1
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas       531 Mar  5 10:05 boinc_task_state.xml
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas        95 Mar  5 10:06 pilot_heartbeat.json
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas      1044 Mar  5 10:06 memory_monitor_summary.json
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas   1521291 Mar  5 10:06 agis_ddmendpoints.agis.ALL.json
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas    466463 Mar  5 10:06 log.48958651._000523.job.log.tgz.1
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas      6395 Mar  5 10:06 heartbeat.json
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas        28 Mar  5 10:07 wrapper_checkpoint.txt
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas      4820 Mar  5 10:07 pilotlog.txt
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas      8192 Mar  5 10:07 boinc_mmap_file
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas   1688067 Mar  5 10:07 log.48958651._000523.job.log.1
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas       357 Mar  5 10:07 output.list
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas       620 Mar  5 10:07 runtime_log
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas   2170880 Mar  5 10:07 result.tar.gz
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas       655 Mar  5 10:07 XIRMDmxqHI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmC4KLDmJtMNan.diag
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas      9342 Mar  5 10:07 runtime_log.err
[2026-03-05 10:07:17] -rw-r--r--. 1 boincer umatlas     21059 Mar  5 10:07 stderr.txt
[2026-03-05 10:07:17] HITS file was successfully produced:
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas 171126784 Mar  5 10:05 shared/HITS.pool.root.1
[2026-03-05 10:07:17]  *** Contents of shared directory: ***
[2026-03-05 10:07:17] total 426880
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas 263204146 Mar  5 06:05 ATLAS.root_0
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 06:05 start_atlas.sh
[2026-03-05 10:07:17] -rw-r--r--. 2 boincer umatlas    597981 Mar  5 06:05 input.tar.gz
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas 171126784 Mar  5 10:05 HITS.pool.root.1
[2026-03-05 10:07:17] -rw-------. 1 boincer umatlas   2170880 Mar  5 10:07 result.tar.gz
10:07:18 (1108681): run_atlas exited; CPU time 38343.131119
10:07:18 (1108681): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN