Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:27 (2321212): wrapper (7.7.26015): starting
00:24:27 (2321212): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 00:24:27] Arguments: --nthreads 4
[2026-03-06 00:24:27] Threads: 4
[2026-03-06 00:24:27] Checking for CVMFS
[2026-03-06 00:24:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 00:24:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 00:24:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 00:24:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 00:24:28] 2.9.2.0 141980 11992 103104 156937 2 50 28687687 36864000 0 130560 0 6020938 99.985 453420 11505 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-06 00:24:28] CVMFS is ok
[2026-03-06 00:24:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 00:24:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 00:24:28] Further information can be found at the LHC@home message board.
[2026-03-06 00:24:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 00:24:28] Checking for apptainer binary...
[2026-03-06 00:24:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 00:24:28] Running /usr/bin/apptainer --version
[2026-03-06 00:24:28] apptainer version 1.4.1-1.1
[2026-03-06 00:24:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 00:24:28] magicA244a
[2026-03-06 00:24:28] apptainer works
[2026-03-06 00:24:28] Set ATHENA_PROC_NUMBER=4
[2026-03-06 00:24:28] Set ATHENA_CORE_NUMBER=4
[2026-03-06 00:24:28] Starting ATLAS job with PandaID=7038589011
[2026-03-06 00:24:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 01:25:56]  *** The last 200 lines of the pilot log: ***
[2026-03-06 01:25:56] 2026-03-06 00:25:26,554 | INFO     | **************************************
[2026-03-06 01:25:56] 2026-03-06 00:25:26,554 | INFO     | 
[2026-03-06 01:25:56] 2026-03-06 00:25:26,554 | INFO     | architecture information:
[2026-03-06 01:25:56] 2026-03-06 00:25:26,555 | INFO     | executing command: cat /etc/os-release
[2026-03-06 01:25:56] 2026-03-06 00:25:26,565 | INFO     | cat /etc/os-release:
[2026-03-06 01:25:56] NAME="CentOS Linux"
[2026-03-06 01:25:56] VERSION="7 (Core)"
[2026-03-06 01:25:56] ID="centos"
[2026-03-06 01:25:56] ID_LIKE="rhel fedora"
[2026-03-06 01:25:56] VERSION_ID="7"
[2026-03-06 01:25:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 01:25:56] ANSI_COLOR="0;31"
[2026-03-06 01:25:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 01:25:56] HOME_URL="https://www.centos.org/"
[2026-03-06 01:25:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 01:25:56] 
[2026-03-06 01:25:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 01:25:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 01:25:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 01:25:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 01:25:56] 
[2026-03-06 01:25:56] 2026-03-06 00:25:26,565 | INFO     | **************************************
[2026-03-06 01:25:56] 2026-03-06 00:25:26,760 | WARNING  | process 2329849 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 01:25:56] 2026-03-06 00:25:26,790 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 01:25:56] 2026-03-06 00:25:26,826 | INFO     | number of running child processes to parent process 2329849: 1
[2026-03-06 01:25:56] 2026-03-06 00:25:26,826 | INFO     | maximum number of monitored processes: 6
[2026-03-06 01:25:56] 2026-03-06 00:25:26,826 | INFO     | aborting job monitoring since job object (job id=7038589011) has expired
[2026-03-06 01:25:56] 2026-03-06 00:25:27,068 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | INFO     | sufficient remaining disk space (328231550976 B)
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | INFO     | update_server=False
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 01:25:56] 2026-03-06 00:25:27,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 01:25:56] 2026-03-06 00:25:27,084 | INFO     | will abort loop
[2026-03-06 01:25:56] 2026-03-06 00:25:27,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 01:25:56] 2026-03-06 00:25:27,346 | INFO     | all data control threads have been joined
[2026-03-06 01:25:56] 2026-03-06 00:25:27,671 | INFO     | all job control threads have been joined
[2026-03-06 01:25:56] 2026-03-06 00:25:28,089 | INFO     | [job] queue monitor thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,089 | INFO     | [job] retrieve thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,089 | INFO     | [job] job monitor thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,352 | INFO     | [data] control thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,416 | INFO     | all payload control threads have been joined
[2026-03-06 01:25:56] 2026-03-06 00:25:28,429 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,677 | INFO     | [job] control thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:28,857 | INFO     | [payload] validate_post thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,244 | INFO     | [data] copytool_out thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,249 | INFO     | [payload] failed_post thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 01:25:56] 2026-03-06 00:25:29,377 | INFO     | [job] validate thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,422 | INFO     | [payload] control thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,459 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,522 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:29,584 | INFO     | [data] copytool_in thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:33,337 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:38,020 | INFO     | job.realtimelogging is not enabled
[2026-03-06 01:25:56] 2026-03-06 00:25:39,026 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 01:25:56] 2026-03-06 00:25:43,036 | INFO     | [monitor] cgroup control has ended
[2026-03-06 01:25:56] 2026-03-06 00:25:45,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621917673280)>', '<ExcThread(monitor, started 139621560198912)>']
[2026-03-06 01:25:56] 2026-03-06 00:25:50,056 | INFO     | all workflow threads have been joined
[2026-03-06 01:25:56] 2026-03-06 00:25:50,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 01:25:56] 2026-03-06 00:25:50,057 | INFO     | traces error code: 0
[2026-03-06 01:25:56] 2026-03-06 00:25:50,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | INFO     | PID=2325331 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 01:25:56] 2026-03-06 00:25:56,849 | INFO     | [monitor] control thread has ended
[2026-03-06 01:25:56] 2026-03-06 00:25:56,899 [wrapper] ==== pilot stdout END ====
[2026-03-06 01:25:56] 2026-03-06 00:25:56,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 01:25:56] 2026-03-06 00:25:56,905 [wrapper] pilotpid: 2325331
[2026-03-06 01:25:56] 2026-03-06 00:25:56,908 [wrapper] Pilot exit status: 0
[2026-03-06 01:25:56] 2026-03-06 00:25:56,916 [wrapper] pandaids: 7038589011
[2026-03-06 01:25:56] 2026-03-06 00:25:56,934 [wrapper] cleanup supervisor_pilot 2334942 2325332
[2026-03-06 01:25:56] 2026-03-06 00:25:56,937 [wrapper] Test setup, not cleaning
[2026-03-06 01:25:56] 2026-03-06 00:25:56,939 [wrapper] apfmon messages muted
[2026-03-06 01:25:56] 2026-03-06 00:25:56,942 [wrapper] ==== wrapper stdout END ====
[2026-03-06 01:25:56] 2026-03-06 00:25:56,944 [wrapper] ==== wrapper stderr END ====
[2026-03-06 01:25:56]  *** Error codes and diagnostics ***
[2026-03-06 01:25:56]     "exeErrorCode": 0,
[2026-03-06 01:25:56]     "exeErrorDiag": "",
[2026-03-06 01:25:56]     "pilotErrorCode": 0,
[2026-03-06 01:25:56]     "pilotErrorDiag": "",
[2026-03-06 01:25:56]  *** Listing of results directory ***
[2026-03-06 01:25:56] total 615644
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc    584627 Mar  5 10:52 pilot3.tar.gz
[2026-03-06 01:25:56] -rwx------ 1 boinc boinc     36322 Mar  5 10:57 runpilot2-wrapper.sh
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      5111 Mar  5 10:59 queuedata.json
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc       100 Mar  6 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 01:25:56] -rwxr-xr-x 1 boinc boinc      7986 Mar  6 00:24 run_atlas
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc       105 Mar  6 00:24 job.xml
[2026-03-06 01:25:56] -rw-r--r-- 2 boinc boinc 438320975 Mar  6 00:24 EVNT.46701403._002149.pool.root.1
[2026-03-06 01:25:56] -rw-r--r-- 2 boinc boinc    597947 Mar  6 00:24 input.tar.gz
[2026-03-06 01:25:56] -rw-r--r-- 2 boinc boinc     15845 Mar  6 00:24 start_atlas.sh
[2026-03-06 01:25:56] drwxrwx--x 2 boinc boinc      4096 Mar  6 00:24 shared
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc         0 Mar  6 00:24 boinc_setup_complete
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      6438 Mar  6 00:24 init_data.xml
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc         0 Mar  6 00:24 boinc_lockfile
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      2568 Mar  6 00:24 pandaJob.out
[2026-03-06 01:25:56] -rw------- 1 boinc boinc    998552 Mar  6 00:24 agis_schedconf.cvmfs.json
[2026-03-06 01:25:56] -rw------- 1 boinc boinc   1521291 Mar  6 00:24 agis_ddmendpoints.agis.ALL.json
[2026-03-06 01:25:56] -rw------- 1 boinc boinc       427 Mar  6 00:24 workernode_map.json
[2026-03-06 01:25:56] drwx------ 5 boinc boinc      4096 Mar  6 00:24 pilot3
[2026-03-06 01:25:56] -rw------- 1 boinc boinc 186617301 Mar  6 01:25 HITS.48955015._005102.pool.root.1
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc       530 Mar  6 01:25 boinc_task_state.xml
[2026-03-06 01:25:56] -rw------- 1 boinc boinc      1017 Mar  6 01:25 memory_monitor_summary.json
[2026-03-06 01:25:56] -rw------- 1 boinc boinc    236161 Mar  6 01:25 log.48955015._005102.job.log.tgz.1
[2026-03-06 01:25:56] -rw------- 1 boinc boinc      6306 Mar  6 01:25 heartbeat.json
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      8192 Mar  6 01:25 boinc_mmap_file
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc        27 Mar  6 01:25 wrapper_checkpoint.txt
[2026-03-06 01:25:56] -rw------- 1 boinc boinc       747 Mar  6 01:25 pilotlog.txt
[2026-03-06 01:25:56] -rw------- 1 boinc boinc        95 Mar  6 01:25 pilot_heartbeat.json
[2026-03-06 01:25:56] -rw------- 1 boinc boinc    549453 Mar  6 01:25 log.48955015._005102.job.log.1
[2026-03-06 01:25:56] -rw------- 1 boinc boinc       357 Mar  6 01:25 output.list
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc       620 Mar  6 01:25 runtime_log
[2026-03-06 01:25:56] -rw------- 1 boinc boinc    798720 Mar  6 01:25 result.tar.gz
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      8916 Mar  6 01:25 runtime_log.err
[2026-03-06 01:25:56] -rw------- 1 boinc boinc       661 Mar  6 01:25 15RKDmMdKI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxVLLDmrXrWVo.diag
[2026-03-06 01:25:56] -rw-r--r-- 1 boinc boinc      9861 Mar  6 01:25 stderr.txt
[2026-03-06 01:25:56] HITS file was successfully produced:
[2026-03-06 01:25:56] -rw------- 1 boinc boinc 186617301 Mar  6 01:25 shared/HITS.pool.root.1
[2026-03-06 01:25:56]  *** Contents of shared directory: ***
[2026-03-06 01:25:57] total 611676
[2026-03-06 01:25:57] -rw-r--r-- 2 boinc boinc 438320975 Mar  6 00:24 ATLAS.root_0
[2026-03-06 01:25:57] -rw-r--r-- 2 boinc boinc    597947 Mar  6 00:24 input.tar.gz
[2026-03-06 01:25:57] -rw-r--r-- 2 boinc boinc     15845 Mar  6 00:24 start_atlas.sh
[2026-03-06 01:25:57] -rw------- 1 boinc boinc 186617301 Mar  6 01:25 HITS.pool.root.1
[2026-03-06 01:25:57] -rw------- 1 boinc boinc    798720 Mar  6 01:25 result.tar.gz
01:25:58 (2321212): run_atlas exited; CPU time 13564.507372
01:25:58 (2321212): called boinc_finish(0)

</stderr_txt>
]]>

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