Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:22:29 (1568844): wrapper (7.7.26015): starting
04:22:29 (1568844): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 04:22:29] Arguments: --nthreads 12
[2026-03-05 04:22:29] Threads: 12
[2026-03-05 04:22:29] Checking for CVMFS
[2026-03-05 04:22:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 04:22:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 04:22:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 04:22:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 04:22:30] 2.11.5.0 3294435 135745 365168 156918 0 412 41114231 45568001 16441 130560 0 910034495 99.792 559958770 18307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-05 04:22:30] CVMFS is ok
[2026-03-05 04:22:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 04:22:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 04:22:30] Further information can be found at the LHC@home message board.
[2026-03-05 04:22:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 04:22:30] Checking for apptainer binary...
[2026-03-05 04:22:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 04:22:30] Running /usr/bin/apptainer --version
[2026-03-05 04:22:30] apptainer version 1.4.1-1.el9
[2026-03-05 04:22:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 04:22:32] wns0052.triumf.lcg
[2026-03-05 04:22:32] apptainer works
[2026-03-05 04:22:32] Set ATHENA_PROC_NUMBER=12
[2026-03-05 04:22:32] Set ATHENA_CORE_NUMBER=12
[2026-03-05 04:22:32] Starting ATLAS job with PandaID=7038579233
[2026-03-05 04:22:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 04:30:26]  *** The last 200 lines of the pilot log: ***
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 04:30:26] 2026-03-05 12:29:16,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | WARNING  | wrong length of table data, x=[1772713563.0, 1772713624.0], y=[1907.0, 471663.0] (must be same and length>=4)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . Timing measurements:
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . get job = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . initial setup = 45 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload setup = 55 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-in = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload execution = 107 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-out = 2 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . log creation = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038579233/pilotlog.txt
[2026-03-05 04:30:26] 2026-03-05 12:29:17,048 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-05 04:30:26] - Log from pilotlog.txt -
[2026-03-05 04:30:26] 2026-03-05 12:29:16,967 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038579233/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | INFO     | extracted standard info from prmon json
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 04:30:26] 2026-03-05 12:29:16,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | WARNING  | wrong length of table data, x=[1772713563.0, 1772713624.0], y=[1907.0, 471663.0] (must be same and length>=4)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . Timing measurements:
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . get job = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . initial setup = 45 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload setup = 55 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-in = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload execution = 107 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-out = 2 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . log creation = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038579233/pilotlog.txt
[2026-03-05 04:30:26] 2026-03-05 12:29:17,048 | WARNING  | 
[2026-03-05 04:30:26] [begin log extracts]
[2026-03-05 04:30:26] - Log from pilotlog.txt -
[2026-03-05 04:30:26] 2026-03-05 12:29:16,967 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038579233/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | INFO     | extracted standard info from prmon json
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 04:30:26] 2026-03-05 12:29:16,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 04:30:26] 2026-03-05 12:29:16,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | WARNING  | wrong length of table data, x=[1772713563.0, 1772713624.0], y=[1907.0, 471663.0] (must be same and length>=4)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . Timing measurements:
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . get job = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,974 | INFO     | . initial setup = 45 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload setup = 55 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-in = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . payload execution = 107 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . stage-out = 2 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | . log creation = 0 s
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | ..............................
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-05 04:30:26] 2026-03-05 12:29:16,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038579233/pilotlog.txt
[2026-03-05 04:30:26] [end log extracts]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,048 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-05 04:30:26] 2026-03-05 12:29:17,049 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-05 04:30:26] 2026-03-05 12:29:17,338 | INFO     | 
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | job summary report
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | --------------------------------------------------
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | PanDA job id: 7038579233
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | task id: 48955006
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-05 04:26:58,453 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | pilot state: failed 
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | transexitcode: 65
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | exeerrorcode: 65
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | exitcode: 65
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | cpuconsumptiontime: 17 s
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | nevents: 0
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | neventsw: 0
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | pid: 1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:17,339 | INFO     | pgrp: 1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | corecount: 12
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | event service: False
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | sizes: {0: 2295309, 1: 2295365, 2: 2295854, 3: 2295882, 168: 2319099, 172: 2323391, 176: 2323547, 293: 2323741}
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | --------------------------------------------------
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | 
[2026-03-05 04:30:26] 2026-03-05 12:29:17,340 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 04:30:26] 2026-03-05 12:29:17,560 | INFO     | job 7038579233 has completed (purged errors)
[2026-03-05 04:30:26] 2026-03-05 12:29:17,561 | INFO     | overall cleanup function is called
[2026-03-05 04:30:26] 2026-03-05 12:29:18,567 | INFO     | --- collectZombieJob: --- 10, [1577581]
[2026-03-05 04:30:26] 2026-03-05 12:29:18,568 | INFO     | zombie collector waiting for pid 1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:18,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 04:30:26] 2026-03-05 12:29:18,568 | INFO     | collected zombie processes
[2026-03-05 04:30:26] 2026-03-05 12:29:18,568 | INFO     | will attempt to kill all subprocesses of pid=1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:19,628 | INFO     | process IDs to be killed: [1577581] (in reverse order)
[2026-03-05 04:30:26] 2026-03-05 12:29:20,108 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 04:30:26] 2026-03-05 12:29:20,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 04:30:26] 2026-03-05 12:29:20,173 | INFO     | did not find any defunct processes belonging to 1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:20,249 | INFO     | did not find any defunct processes belonging to 1577581
[2026-03-05 04:30:26] 2026-03-05 12:29:20,278 | INFO     | ready for new job
[2026-03-05 04:30:26] 2026-03-05 12:29:20,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 04:30:26] 2026-03-05 12:29:20,280 | INFO     | **************************************
[2026-03-05 04:30:26] 2026-03-05 12:29:20,280 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 04:30:26] 2026-03-05 12:29:20,280 | INFO     | **************************************
[2026-03-05 04:30:26] 2026-03-05 12:29:20,280 | INFO     | 
[2026-03-05 04:30:26] 2026-03-05 12:29:20,325 | INFO     | architecture information:
[2026-03-05 04:30:26] 2026-03-05 12:29:20,352 | INFO     | executing command: cat /etc/os-release
[2026-03-05 04:30:26] 2026-03-05 12:29:20,473 | INFO     | cat /etc/os-release:
[2026-03-05 04:30:26] NAME="CentOS Linux"
[2026-03-05 04:30:26] VERSION="7 (Core)"
[2026-03-05 04:30:26] ID="centos"
[2026-03-05 04:30:26] ID_LIKE="rhel fedora"
[2026-03-05 04:30:26] VERSION_ID="7"
[2026-03-05 04:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 04:30:26] ANSI_COLOR="0;31"
[2026-03-05 04:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 04:30:26] HOME_URL="https://www.centos.org/"
[2026-03-05 04:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 04:30:26] 
[2026-03-05 04:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 04:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 04:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 04:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 04:30:26] 
[2026-03-05 04:30:26] 2026-03-05 12:29:20,473 | INFO     | **************************************
[2026-03-05 04:30:26] 2026-03-05 12:29:20,977 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-05 04:30:26] 2026-03-05 12:29:21,108 | INFO     | sufficient remaining disk space (2211331440640 B)
[2026-03-05 04:30:26] 2026-03-05 12:29:21,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 04:30:26] 2026-03-05 12:29:21,108 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 04:30:26] 2026-03-05 12:29:21,108 | INFO     | update_server=False
[2026-03-05 04:30:26] 2026-03-05 12:29:21,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 04:30:26] 2026-03-05 12:29:21,437 | INFO     | all data control threads have been joined
[2026-03-05 04:30:26] 2026-03-05 12:29:21,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:30:26] 2026-03-05 12:29:21,519 | INFO     | aborting loop
[2026-03-05 04:30:26] 2026-03-05 12:29:21,543 | INFO     | all job control threads have been joined
[2026-03-05 04:30:26] 2026-03-05 12:29:21,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 04:30:26] 2026-03-05 12:29:22,114 | INFO     | [job] retrieve thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,252 | INFO     | [data] copytool_in thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,290 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,331 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,346 | INFO     | all payload control threads have been joined
[2026-03-05 04:30:26] 2026-03-05 12:29:22,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:30:26] 2026-03-05 12:29:22,447 | INFO     | [data] control thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,524 | INFO     | [job] job monitor thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,549 | INFO     | [job] control thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 04:30:26] 2026-03-05 12:29:22,627 | INFO     | [payload] failed_post thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,940 | INFO     | [payload] validate_post thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:22,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:23,295 | INFO     | [job] validate thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:23,352 | INFO     | [payload] control thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:23,392 | INFO     | [job] queue monitor thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:23,449 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:23,731 | INFO     | [data] copytool_out thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:26,630 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 04:30:26] 2026-03-05 12:29:49,617 | INFO     | PID=1572696 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 04:30:26] 2026-03-05 12:29:49,617 | INFO     | .. there are 28 such processes running
[2026-03-05 04:30:26] 2026-03-05 12:29:49,618 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 04:30:26] 2026-03-05 12:29:49,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 04:30:26] 2026-03-05 12:29:49,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 04:30:26] 2026-03-05 12:30:19,346 | INFO     | [monitor] cgroup control has ended
[2026-03-05 04:30:26] 2026-03-05 12:30:19,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744791295808)>', '<ExcThread(monitor, started 139744226809600)>']
[2026-03-05 04:30:26] 2026-03-05 12:30:19,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 04:30:26] 2026-03-05 12:30:19,817 | INFO     | [monitor] control thread has ended
[2026-03-05 04:30:26] 2026-03-05 12:30:24,702 | INFO     | all workflow threads have been joined
[2026-03-05 04:30:26] 2026-03-05 12:30:24,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 04:30:26] 2026-03-05 12:30:24,703 | INFO     | traces error code: 0
[2026-03-05 04:30:26] 2026-03-05 12:30:24,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 04:30:26] 2026-03-05 12:30:25,274 [wrapper] ==== pilot stdout END ====
[2026-03-05 04:30:26] 2026-03-05 12:30:25,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 04:30:26] 2026-03-05 12:30:25,356 [wrapper] pilotpid: 1572696
[2026-03-05 04:30:26] 2026-03-05 12:30:25,368 [wrapper] Pilot exit status: 0
[2026-03-05 04:30:26] 2026-03-05 12:30:25,487 [wrapper] pandaids: 7038579233
[2026-03-05 04:30:26] 2026-03-05 12:30:25,852 [wrapper] cleanup supervisor_pilot 1572702 1572697
[2026-03-05 04:30:26] 2026-03-05 12:30:25,872 [wrapper] Test setup, not cleaning
[2026-03-05 04:30:26] 2026-03-05 12:30:25,942 [wrapper] apfmon messages muted
[2026-03-05 04:30:26] 2026-03-05 12:30:25,991 [wrapper] ==== wrapper stdout END ====
[2026-03-05 04:30:26] 2026-03-05 12:30:26,026 [wrapper] ==== wrapper stderr END ====
[2026-03-05 04:30:26]  *** Error codes and diagnostics ***
[2026-03-05 04:30:26]     "exeErrorCode": 65,
[2026-03-05 04:30:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 04:30:26]     "pilotErrorCode": 1305,
[2026-03-05 04:30:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-05 04:30:26]  *** Listing of results directory ***
[2026-03-05 04:30:26] total 432812
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc    584627 Mar  5 00:55 pilot3.tar.gz
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc      5111 Mar  5 00:55 queuedata.json
[2026-03-05 04:30:26] -rwx------. 1 boinc boinc     36322 Mar  5 00:55 runpilot2-wrapper.sh
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc       100 Mar  5 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 04:30:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 04:22 run_atlas
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc       105 Mar  5 04:22 job.xml
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc      6589 Mar  5 04:22 init_data.xml
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc 439030670 Mar  5 04:22 EVNT.46701403._000090.pool.root.1
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:22 start_atlas.sh
[2026-03-05 04:30:26] drwxrwx--x. 2 boinc boinc      4096 Mar  5 04:22 shared
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc    597949 Mar  5 04:22 input.tar.gz
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc         0 Mar  5 04:22 boinc_lockfile
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc      2562 Mar  5 04:22 pandaJob.out
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc    998489 Mar  5 04:23 agis_schedconf.cvmfs.json
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc   1521291 Mar  5 04:23 agis_ddmendpoints.agis.ALL.json
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc       445 Mar  5 04:24 workernode_map.json
[2026-03-05 04:30:26] drwx------. 5 boinc boinc      4096 Mar  5 04:24 pilot3
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc       524 Mar  5 04:26 boinc_task_state.xml
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc       987 Mar  5 04:27 memory_monitor_summary.json
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc     21854 Mar  5 04:27 log.48955006._004493.job.log.tgz.1
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc      7031 Mar  5 04:29 heartbeat.json
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc        95 Mar  5 04:29 pilot_heartbeat.json
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc        23 Mar  5 04:30 wrapper_checkpoint.txt
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc      8192 Mar  5 04:30 boinc_mmap_file
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc      4819 Mar  5 04:30 pilotlog.txt
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc     96132 Mar  5 04:30 log.48955006._004493.job.log.1
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc       188 Mar  5 04:30 output.list
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc       620 Mar  5 04:30 runtime_log
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc    133120 Mar  5 04:30 result.tar.gz
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc      8635 Mar  5 04:30 runtime_log.err
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc       642 Mar  5 04:30 f4eLDmXfJI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuHNLDmNcpPdn.diag
[2026-03-05 04:30:26] -rw-r--r--. 1 boinc boinc     21870 Mar  5 04:30 stderr.txt
[2026-03-05 04:30:26] No HITS result produced
[2026-03-05 04:30:26]  *** Contents of shared directory: ***
[2026-03-05 04:30:26] total 429480
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc 439030670 Mar  5 04:22 ATLAS.root_0
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:22 start_atlas.sh
[2026-03-05 04:30:26] -rw-r--r--. 2 boinc boinc    597949 Mar  5 04:22 input.tar.gz
[2026-03-05 04:30:26] -rw-------. 1 boinc boinc    133120 Mar  5 04:30 result.tar.gz
04:30:28 (1568844): run_atlas exited; CPU time 30.798427
04:30:28 (1568844): called boinc_finish(0)

</stderr_txt>
]]>

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