Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:45 (10216): wrapper (7.7.26015): starting
06:27:45 (10216): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 06:27:45] Arguments: --nthreads 12
[2026-03-05 06:27:45] Threads: 12
[2026-03-05 06:27:45] Checking for CVMFS
[2026-03-05 06:27:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 06:27:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 06:27:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 06:27:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 06:27:45] 2.11.2.0 2979 430195 96968 156918 3 51 15570119 20275201 1 130560 1 182952428 99.957 24124068 17499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 06:27:45] CVMFS is ok
[2026-03-05 06:27:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 06:27:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 06:27:45] Further information can be found at the LHC@home message board.
[2026-03-05 06:27:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 06:27:45] Checking for apptainer binary...
[2026-03-05 06:27:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 06:27:45] Running /usr/bin/apptainer --version
[2026-03-05 06:27:45] apptainer version 1.3.2-1.el7
[2026-03-05 06:27:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 06:27:47] c-205-21.aglt2.org
[2026-03-05 06:27:47] apptainer works
[2026-03-05 06:27:47] Set ATHENA_PROC_NUMBER=12
[2026-03-05 06:27:47] Set ATHENA_CORE_NUMBER=12
[2026-03-05 06:27:47] Starting ATLAS job with PandaID=7038574822
[2026-03-05 06:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 07:34:18]  *** The last 200 lines of the pilot log: ***
[2026-03-05 07:34:18]  replicas=None
[2026-03-05 07:34:18]  scope=mc23_13p6TeV
[2026-03-05 07:34:18]  status=None
[2026-03-05 07:34:18]  status_code=0
[2026-03-05 07:34:18]  storage_token=
[2026-03-05 07:34:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038574822/log.48955006._004314.job.log.tgz.1
[2026-03-05 07:34:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/38/log.48955006._004314.job.log.tgz.1
[2026-03-05 07:34:18]  workdir=None
[2026-03-05 07:34:18] ]
[2026-03-05 07:34:18] 2026-03-05 12:33:36,880 | INFO     | transferring file log.48955006._004314.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038574822/log.48955006._004314.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 07:34:18] 2026-03-05 12:33:36,880 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038574822/log.48955006._004314.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._004314.job
[2026-03-05 07:34:18] 2026-03-05 12:33:36,901 | INFO     | adding to output.list: log.48955006._004314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/38/log.48955006._004314.job.log.tg
[2026-03-05 07:34:18] 2026-03-05 12:33:36,902 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 07:34:18] 2026-03-05 12:33:36,902 | INFO     | summary of transferred files:
[2026-03-05 07:34:18] 2026-03-05 12:33:36,902 | INFO     |  -- lfn=log.48955006._004314.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 07:34:18] 2026-03-05 12:33:36,902 | INFO     | stage-out finished correctly
[2026-03-05 07:34:18] 2026-03-05 12:33:37,533 | INFO     | time since job start (3930s) is within the limit (349056.0s)
[2026-03-05 07:34:18] 2026-03-05 12:33:37,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 07:34:18] 2026-03-05 12:33:39,539 | INFO     | time since job start (3932s) is within the limit (349056.0s)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,351 | INFO     | job 7038574822 has state=finished
[2026-03-05 07:34:18] 2026-03-05 12:33:40,351 | INFO     | preparing for final server update for job 7038574822 in state='finished'
[2026-03-05 07:34:18] 2026-03-05 12:33:40,352 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038574822/jobReport.json
[2026-03-05 07:34:18] 2026-03-05 12:33:40,355 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-05 07:34:18] 2026-03-05 12:33:40,355 | INFO     | this job has now completed (state=finished)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,356 | INFO     | log transfer has been attempted: DONE
[2026-03-05 07:34:18] 2026-03-05 12:33:40,356 | INFO     | job 7038574822 has finished - writing final server update
[2026-03-05 07:34:18] 2026-03-05 12:33:40,356 | INFO     | total number of processed events: 400 (read)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,359 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038574822/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,360 | INFO     | extracted standard info from prmon json
[2026-03-05 07:34:18] 2026-03-05 12:33:40,360 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 07:34:18] 2026-03-05 12:33:40,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 07:34:18] 2026-03-05 12:33:40,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 07:34:18] 2026-03-05 12:33:40,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 07:34:18] 2026-03-05 12:33:40,362 | INFO     | fitting pss+swap vs Time
[2026-03-05 07:34:18] 2026-03-05 12:33:40,362 | INFO     | sum of square deviations: 57407588.0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,362 | INFO     | sum of deviations: 1002565866.0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | mean x: 1772712124.0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | mean y: 2956600.3684210526
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | intersect: -30955680187.62482
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | chi2: 0.0013058407360079616
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | current memory leak: 17.46 B/s (using 57 data points, chi2=0.00)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,363 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | ..............................
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . Timing measurements:
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . get job = 0 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . initial setup = 7 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . payload setup = 7 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . stage-in = 0 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . payload execution = 3905 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . stage-out = 0 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,364 | INFO     | . log creation = 0 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,365 | INFO     | ..............................
[2026-03-05 07:34:18] 2026-03-05 12:33:40,459 | INFO     | 
[2026-03-05 07:34:18] 2026-03-05 12:33:40,459 | INFO     | job summary report
[2026-03-05 07:34:18] 2026-03-05 12:33:40,459 | INFO     | --------------------------------------------------
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | PanDA job id: 7038574822
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | task id: 48955006
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | errors: (none)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | pilot state: finished 
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | transexitcode: 0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,460 | INFO     | exeerrorcode: 0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | exeerrordiag: 
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | exitcode: 0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | exitmsg: OK
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | cpuconsumptiontime: 42367 s
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | nevents: 400
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | neventsw: 0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | pid: 18324
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | pgrp: 18324
[2026-03-05 07:34:18] 2026-03-05 12:33:40,461 | INFO     | corecount: 12
[2026-03-05 07:34:18] 2026-03-05 12:33:40,462 | INFO     | event service: False
[2026-03-05 07:34:18] 2026-03-05 12:33:40,462 | INFO     | sizes: {0: 2295799, 11: 2295799, 3916: 2321598, 3918: 2330596, 3919: 2330652, 3922: 2330846}
[2026-03-05 07:34:18] 2026-03-05 12:33:40,462 | INFO     | --------------------------------------------------
[2026-03-05 07:34:18] 2026-03-05 12:33:40,462 | INFO     | 
[2026-03-05 07:34:18] 2026-03-05 12:33:40,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 07:34:18] 2026-03-05 12:33:40,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,488 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 07:34:18] 2026-03-05 12:33:40,488 | INFO     | job 7038574822 has completed (purged errors)
[2026-03-05 07:34:18] 2026-03-05 12:33:40,488 | INFO     | overall cleanup function is called
[2026-03-05 07:34:18] 2026-03-05 12:33:41,110 | WARNING  | process 18324 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 07:34:18] 2026-03-05 12:33:41,186 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:34:18] 2026-03-05 12:33:41,187 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:34:18] 2026-03-05 12:33:41,187 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-05 07:34:18] 2026-03-05 12:33:41,187 | WARNING  | maxPSS not found in memory monitor output
[2026-03-05 07:34:18] 2026-03-05 12:33:41,188 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7038574822/payload.stdout) since it has not been created yet
[2026-03-05 07:34:18] 2026-03-05 12:33:41,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 07:34:18] 2026-03-05 12:33:41,206 | INFO     | sufficient remaining disk space (28905046016 B)
[2026-03-05 07:34:18] 2026-03-05 12:33:41,206 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-05 07:34:18] 2026-03-05 12:33:41,206 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7038574822/HITS.48955006._004314.pool.root.1 since it does not exist
[2026-03-05 07:34:18] 2026-03-05 12:33:41,295 | INFO     | number of running child processes to parent process 18324: 1
[2026-03-05 07:34:18] 2026-03-05 12:33:41,295 | INFO     | maximum number of monitored processes: 6
[2026-03-05 07:34:18] 2026-03-05 12:33:41,295 | INFO     | aborting job monitoring since job object (job id=7038574822) has expired
[2026-03-05 07:34:18] 2026-03-05 12:33:41,496 | INFO     | --- collectZombieJob: --- 10, [18324]
[2026-03-05 07:34:18] 2026-03-05 12:33:41,496 | INFO     | zombie collector waiting for pid 18324
[2026-03-05 07:34:18] 2026-03-05 12:33:41,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 07:34:18] 2026-03-05 12:33:41,497 | INFO     | collected zombie processes
[2026-03-05 07:34:18] 2026-03-05 12:33:41,497 | INFO     | will attempt to kill all subprocesses of pid=18324
[2026-03-05 07:34:18] 2026-03-05 12:33:41,583 | INFO     | process IDs to be killed: [18324] (in reverse order)
[2026-03-05 07:34:18] 2026-03-05 12:33:41,632 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 07:34:18] 2026-03-05 12:33:41,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 07:34:18] 2026-03-05 12:33:41,636 | INFO     | did not find any defunct processes belonging to 18324
[2026-03-05 07:34:18] 2026-03-05 12:33:41,640 | INFO     | did not find any defunct processes belonging to 18324
[2026-03-05 07:34:18] 2026-03-05 12:33:41,640 | INFO     | ready for new job
[2026-03-05 07:34:18] 2026-03-05 12:33:41,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 07:34:18] 2026-03-05 12:33:41,641 | INFO     | **************************************
[2026-03-05 07:34:18] 2026-03-05 12:33:41,641 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 07:34:18] 2026-03-05 12:33:41,641 | INFO     | **************************************
[2026-03-05 07:34:18] 2026-03-05 12:33:41,642 | INFO     | 
[2026-03-05 07:34:18] 2026-03-05 12:33:41,642 | INFO     | architecture information:
[2026-03-05 07:34:18] 2026-03-05 12:33:41,643 | INFO     | executing command: cat /etc/os-release
[2026-03-05 07:34:18] 2026-03-05 12:33:41,658 | INFO     | cat /etc/os-release:
[2026-03-05 07:34:18] NAME="CentOS Linux"
[2026-03-05 07:34:18] VERSION="7 (Core)"
[2026-03-05 07:34:18] ID="centos"
[2026-03-05 07:34:18] ID_LIKE="rhel fedora"
[2026-03-05 07:34:18] VERSION_ID="7"
[2026-03-05 07:34:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 07:34:18] ANSI_COLOR="0;31"
[2026-03-05 07:34:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 07:34:18] HOME_URL="https://www.centos.org/"
[2026-03-05 07:34:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 07:34:18] 
[2026-03-05 07:34:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 07:34:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 07:34:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 07:34:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 07:34:18] 
[2026-03-05 07:34:18] 2026-03-05 12:33:41,658 | INFO     | **************************************
[2026-03-05 07:34:18] 2026-03-05 12:33:42,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 07:34:18] 2026-03-05 12:33:42,177 | INFO     | sufficient remaining disk space (28905046016 B)
[2026-03-05 07:34:18] 2026-03-05 12:33:42,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 07:34:18] 2026-03-05 12:33:42,178 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 07:34:18] 2026-03-05 12:33:42,178 | INFO     | update_server=False
[2026-03-05 07:34:18] 2026-03-05 12:33:42,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 07:34:18] 2026-03-05 12:33:42,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:34:18] 2026-03-05 12:33:42,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:34:18] 2026-03-05 12:33:42,179 | INFO     | will abort loop
[2026-03-05 07:34:18] 2026-03-05 12:33:42,465 | INFO     | all payload control threads have been joined
[2026-03-05 07:34:18] 2026-03-05 12:33:42,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 07:34:18] 2026-03-05 12:33:42,994 | INFO     | all data control threads have been joined
[2026-03-05 07:34:18] 2026-03-05 12:33:43,183 | INFO     | [job] retrieve thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,184 | INFO     | [job] queue monitor thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,184 | INFO     | [job] job monitor thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,210 | INFO     | all job control threads have been joined
[2026-03-05 07:34:18] 2026-03-05 12:33:43,242 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,470 | INFO     | [payload] control thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,669 | INFO     | [data] copytool_in thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,680 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:43,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 07:34:18] 2026-03-05 12:33:43,731 | INFO     | [payload] validate_post thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,000 | INFO     | [data] control thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,216 | INFO     | [job] control thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,475 | INFO     | [job] validate thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,498 | INFO     | [data] copytool_out thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,521 | INFO     | [payload] failed_post thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:44,654 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:33:47,713 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 07:34:18] 2026-03-05 12:34:12,743 | INFO     | PID=13896 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 07:34:18] 2026-03-05 12:34:12,744 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 07:34:18] 2026-03-05 12:34:12,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 07:34:18] 2026-03-05 12:34:12,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 07:34:18] 2026-03-05 12:34:13,007 | INFO     | [monitor] cgroup control has ended
[2026-03-05 07:34:18] 2026-03-05 12:34:13,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084066662208)>', '<ExcThread(monitor, started 140083596334848)>']
[2026-03-05 07:34:18] 2026-03-05 12:34:13,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 07:34:18] 2026-03-05 12:34:13,750 | INFO     | [monitor] control thread has ended
[2026-03-05 07:34:18] 2026-03-05 12:34:18,530 | INFO     | all workflow threads have been joined
[2026-03-05 07:34:18] 2026-03-05 12:34:18,531 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 07:34:18] 2026-03-05 12:34:18,549 | INFO     | traces error code: 0
[2026-03-05 07:34:18] 2026-03-05 12:34:18,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 07:34:18] 2026-03-05 12:34:18,661 [wrapper] ==== pilot stdout END ====
[2026-03-05 07:34:18] 2026-03-05 12:34:18,664 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 07:34:18] 2026-03-05 12:34:18,668 [wrapper] pilotpid: 13896
[2026-03-05 07:34:18] 2026-03-05 12:34:18,671 [wrapper] Pilot exit status: 0
[2026-03-05 07:34:18] 2026-03-05 12:34:18,687 [wrapper] pandaids: 7038574822
[2026-03-05 07:34:18] 2026-03-05 12:34:18,724 [wrapper] cleanup supervisor_pilot  4158 13897
[2026-03-05 07:34:18] 2026-03-05 12:34:18,728 [wrapper] Test setup, not cleaning
[2026-03-05 07:34:18] 2026-03-05 12:34:18,732 [wrapper] apfmon messages muted
[2026-03-05 07:34:18] 2026-03-05 12:34:18,736 [wrapper] ==== wrapper stdout END ====
[2026-03-05 07:34:18] 2026-03-05 12:34:18,740 [wrapper] ==== wrapper stderr END ====
[2026-03-05 07:34:18]  *** Error codes and diagnostics ***
[2026-03-05 07:34:18]     "exeErrorCode": 0,
[2026-03-05 07:34:18]     "exeErrorDiag": "",
[2026-03-05 07:34:18]     "pilotErrorCode": 0,
[2026-03-05 07:34:18]     "pilotErrorDiag": "",
[2026-03-05 07:34:18]  *** Listing of results directory ***
[2026-03-05 07:34:18] total 612792
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas      5111 Mar  5 03:05 queuedata.json
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas    584627 Mar  5 03:05 pilot3.tar.gz
[2026-03-05 07:34:18] -rwx------ 1 boincer umatlas     36322 Mar  5 03:05 runpilot2-wrapper.sh
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas       100 Mar  5 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 07:34:18] -rwxr-xr-x 1 boincer umatlas      7986 Mar  5 06:27 run_atlas
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas       105 Mar  5 06:27 job.xml
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas 441580725 Mar  5 06:27 EVNT.46701403._000087.pool.root.1
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 06:27 start_atlas.sh
[2026-03-05 07:34:18] drwxrwx--x 2 boincer umatlas      4096 Mar  5 06:27 shared
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas    597952 Mar  5 06:27 input.tar.gz
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas         0 Mar  5 06:27 boinc_lockfile
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas      2561 Mar  5 06:27 pandaJob.out
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas        57 Mar  5 06:27 setup.sh.local
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas    998489 Mar  5 06:28 agis_schedconf.cvmfs.json
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas   1521291 Mar  5 06:28 agis_ddmendpoints.agis.ALL.json
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas       445 Mar  5 06:28 workernode_map.json
[2026-03-05 07:34:18] drwx------ 5 boincer umatlas      4096 Mar  5 06:28 pilot3
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas      5953 Mar  5 07:27 init_data.xml
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas 180067789 Mar  5 07:33 HITS.48955006._004314.pool.root.1
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas       530 Mar  5 07:33 boinc_task_state.xml
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas      1044 Mar  5 07:33 memory_monitor_summary.json
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas    377409 Mar  5 07:33 log.48955006._004314.job.log.tgz.1
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas      6412 Mar  5 07:33 heartbeat.json
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 07:33 boinc_mmap_file
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas        27 Mar  5 07:33 wrapper_checkpoint.txt
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas        95 Mar  5 07:34 pilot_heartbeat.json
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas      4744 Mar  5 07:34 pilotlog.txt
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas    580672 Mar  5 07:34 log.48955006._004314.job.log.1
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas       357 Mar  5 07:34 output.list
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas       620 Mar  5 07:34 runtime_log
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas    972800 Mar  5 07:34 result.tar.gz
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas       659 Mar  5 07:34 X5XKDmKtII9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQBNLDmNwmRPn.diag
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas      9343 Mar  5 07:34 runtime_log.err
[2026-03-05 07:34:18] -rw-r--r-- 1 boincer umatlas     22021 Mar  5 07:34 stderr.txt
[2026-03-05 07:34:18] HITS file was successfully produced:
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas 180067789 Mar  5 07:33 shared/HITS.pool.root.1
[2026-03-05 07:34:18]  *** Contents of shared directory: ***
[2026-03-05 07:34:18] total 608636
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas 441580725 Mar  5 06:27 ATLAS.root_0
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 06:27 start_atlas.sh
[2026-03-05 07:34:18] -rw-r--r-- 2 boincer umatlas    597952 Mar  5 06:27 input.tar.gz
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas 180067789 Mar  5 07:33 HITS.pool.root.1
[2026-03-05 07:34:18] -rw------- 1 boincer umatlas    972800 Mar  5 07:34 result.tar.gz
07:34:20 (10216): run_atlas exited; CPU time 42343.410425
07:34:20 (10216): called boinc_finish(0)

</stderr_txt>
]]>

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