Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 13:43:27 (37464): vboxwrapper version 26210
2026-03-05 13:43:27 (37464): BOINC client version: 8.2.8
2026-03-05 13:43:28 (37464): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-05 13:43:28 (37464): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 13:43:29 (37464): Create VM. (boinc_7f3c6e4eabbbe6ee, slot#2)
2026-03-05 13:43:29 (37464): Setting Memory Size for VM. (4100MB)
2026-03-05 13:43:29 (37464): Setting CPU Count for VM. (1)
2026-03-05 13:43:30 (37464): Setting Chipset Options for VM.
2026-03-05 13:43:30 (37464): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 13:43:30 (37464): Setting Boot Options for VM.
2026-03-05 13:43:31 (37464): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 13:43:31 (37464): Enabling VM Network Access.
2026-03-05 13:43:31 (37464): Disabling USB Support for VM.
2026-03-05 13:43:31 (37464): Disabling COM Port Support for VM.
2026-03-05 13:43:32 (37464): Disabling LPT Port Support for VM.
2026-03-05 13:43:32 (37464): Disabling Audio Support for VM.
2026-03-05 13:43:32 (37464): Disabling Clipboard Support for VM.
2026-03-05 13:43:32 (37464): Disabling Drag and Drop Support for VM.
2026-03-05 13:43:33 (37464): Adding storage controller(s) to VM.
2026-03-05 13:43:33 (37464): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 13:43:35 (37464): Adding VirtualBox Guest Additions to VM.
2026-03-05 13:43:35 (37464): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 13:43:36 (37464): forwarding host port 56029 to guest port 80
2026-03-05 13:43:36 (37464): Enabling remote desktop for VM.
2026-03-05 13:43:36 (37464): Required extension pack not installed, remote desktop not enabled.
2026-03-05 13:43:36 (37464): Enabling shared directory for VM.
2026-03-05 13:43:37 (37464): Starting VM using VBoxManage interface. (boinc_7f3c6e4eabbbe6ee, slot#2)
2026-03-05 13:43:44 (37464): Successfully started VM. (PID = '43620')
2026-03-05 13:43:44 (37464): Reporting VM Process ID to BOINC.
2026-03-05 13:43:44 (37464): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-05 13:43:44 (37464): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 13:43:44 (37464): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 13:43:44 (37464): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 13:43:44 (37464): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 13:43:44 (37464): Detected: Web Application Enabled (http://localhost:56029)
2026-03-05 13:43:44 (37464): Preference change detected
2026-03-05 13:43:44 (37464): Setting CPU throttle for VM. (100%)
2026-03-05 13:43:45 (37464): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 13:43:46 (37464): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 13:43:46 (37464): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 13:43:48 (37464): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 13:43:48 (37464): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 13:43:48 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 13:43:48 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 13:43:49 (37464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 13:43:53 (37464): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 13:43:53 (37464): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 13:43:59 (37464): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000083 main     Log opened 2026-03-05T13:43:56.601752000Z
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000161 main     OS Product: Linux
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000191 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000228 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000254 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000255 main     Process ID: 1246
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.000256 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 13:43:59 (37464): Guest Log: 00:00:00.001799 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 13:43:59 (37464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 13:43:59 (37464): Guest Log: [INFO] Mounting shared directory
2026-03-05 13:43:59 (37464): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 13:44:05 (37464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 13:44:05 (37464): Guest Log: [INFO] Detected branch: prod
2026-03-05 13:44:06 (37464): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 13:44:06 (37464): Guest Log: Copying input files
2026-03-05 13:44:07 (37464): Guest Log: Copied input files into RunAtlas.
2026-03-05 13:44:07 (37464): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 13:44:07 (37464): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 13:44:07 (37464): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 13:44:07 (37464): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 13:44:09 (37464): Guest Log: 00:00:10.013680 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 185 565 000ns (GuestNow=1 772 747 048 800 443 000 ns GuestLast=1 772 718 236 614 878 000 ns fSetTimeLastLoop=true )
2026-03-05 13:44:18 (37464): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 13:44:18 (37464): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 13:44:18 (37464): Guest Log: 2.6.3.0 1536 0 30060 156933 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 13:44:19 (37464): Guest Log: copied the webapp to /var/www
2026-03-05 13:44:19 (37464): Guest Log: core_number=1
2026-03-05 13:44:19 (37464): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 13:44:19 (37464): Guest Log:  *** Starting ATLAS job. (PandaID=7038573792 taskID=48955015) ***
2026-03-05 15:23:49 (37464): Status Report: Elapsed Time: '6000.000000'
2026-03-05 15:23:49 (37464): Status Report: CPU Time: '5911.390625'
2026-03-05 17:03:54 (37464): Status Report: Elapsed Time: '12000.000000'
2026-03-05 17:03:54 (37464): Status Report: CPU Time: '11903.156250'
2026-03-05 18:43:58 (37464): Status Report: Elapsed Time: '18000.000000'
2026-03-05 18:43:58 (37464): Status Report: CPU Time: '17892.890625'
2026-03-05 20:24:03 (37464): Status Report: Elapsed Time: '24000.000000'
2026-03-05 20:24:03 (37464): Status Report: CPU Time: '23879.171875'
2026-03-05 22:04:08 (37464): Status Report: Elapsed Time: '30000.000000'
2026-03-05 22:04:08 (37464): Status Report: CPU Time: '29868.296875'
2026-03-05 22:51:45 (37464): Guest Log:  *** Job finished ***
2026-03-05 22:51:45 (37464): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:08,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:08,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:39,067 | INFO     | [monitor] cgroup control has ended
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:39,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700831672128)>', '<ExcThread(monitor, started 139700245358336)>']
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:39,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:39,864 | INFO     | [monitor] control thread has ended
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,363 | INFO     | all workflow threads have been joined
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,363 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,363 | INFO     | traces error code: 0
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,426 [wrapper] ==== pilot stdout END ====
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,429 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,431 [wrapper] pilotpid: 5868
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,433 [wrapper] Pilot exit status: 0
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,494 [wrapper] pandaids: 7038573792
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,508 [wrapper] cleanup supervisor_pilot   951 5869
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,511 [wrapper] Test setup, not cleaning
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,513 [wrapper] apfmon messages muted
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,515 [wrapper] ==== wrapper stdout END ====
2026-03-05 22:51:45 (37464): Guest Log: 2026-03-06 06:51:44,517 [wrapper] ==== wrapper stderr END ====
2026-03-05 22:51:45 (37464): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 22:51:45 (37464): Guest Log:     "exeErrorCode": 0,
2026-03-05 22:51:45 (37464): Guest Log:     "exeErrorDiag": "",
2026-03-05 22:51:45 (37464): Guest Log:     "pilotErrorCode": 0,
2026-03-05 22:51:45 (37464): Guest Log:     "pilotErrorDiag": "",
2026-03-05 22:51:45 (37464): Guest Log:  *** Listing of results directory ***
2026-03-05 22:51:45 (37464): Guest Log: total 196812
2026-03-05 22:51:45 (37464): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 08:05 queuedata.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 08:05 pilot3.tar.gz
2026-03-05 22:51:45 (37464): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 08:05 runpilot2-wrapper.sh
2026-03-05 22:51:45 (37464): Guest Log: -rwxr-xr-x. 1 atlas atlas      8718 Mar  5 21:44 init_data.xml
2026-03-05 22:51:45 (37464): Guest Log: -rwxr-xr-x. 1 atlas atlas    597952 Mar  5 21:44 input.tar.gz
2026-03-05 22:51:45 (37464): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 21:44 start_atlas.sh
2026-03-05 22:51:45 (37464): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 21:44 EVNT.46701403._002131.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 22:51:45 (37464): Guest Log: -rw-r--r--. 1 atlas atlas      2570 Mar  5 21:44 pandaJob.out
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas    998552 Mar  5 21:44 agis_schedconf.cvmfs.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas       426 Mar  5 21:45 workernode_map.json
2026-03-05 22:51:45 (37464): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 21:45 pilot3
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas 187262846 Mar  6 06:50 HITS.48955015._004339.pool.root.1
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  6 06:50 memory_monitor_summary.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 06:50 agis_ddmendpoints.agis.ALL.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas    645732 Mar  6 06:50 log.48955015._004339.job.log.tgz.1
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas      6372 Mar  6 06:50 heartbeat.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 06:51 pilot_heartbeat.json
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  6 06:51 pilotlog.txt
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas   4557557 Mar  6 06:51 log.48955015._004339.job.log.1
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 06:51 output.list
2026-03-05 22:51:45 (37464): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 06:51 runtime_log
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas   5222400 Mar  6 06:51 result.tar.gz
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas       652 Mar  6 06:51 U14NDmStII9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwBNLDmnDzPjn.diag
2026-03-05 22:51:45 (37464): Guest Log: -rw-r--r--. 1 atlas atlas      8616 Mar  6 06:51 runtime_log.err
2026-03-05 22:51:45 (37464): Guest Log: Looking for outputfile HITS.48955015._004339.pool.root.1
2026-03-05 22:51:45 (37464): Guest Log: HITS file was successfully produced
2026-03-05 22:51:45 (37464): Guest Log: -rw-------. 1 atlas atlas 187262846 Mar  6 06:50 /home/atlas/RunAtlas/HITS.48955015._004339.pool.root.1
2026-03-05 22:51:45 (37464): Guest Log: Successfully finished the ATLAS job!
2026-03-05 22:51:45 (37464): Guest Log: Copying the results back to the shared directory!
2026-03-05 22:51:45 (37464): Guest Log:  *** Contents of shared directory: ***
2026-03-05 22:51:45 (37464): Guest Log: total 619260
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root 441006713 Mar  5 21:43 ATLAS.root_0
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root 187262846 Mar  6 06:51 HITS.pool.root.1
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root      8718 Mar  5 21:43 init_data.xml
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root    597952 Mar  5 11:16 input.tar.gz
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root   5222400 Mar  6 06:51 result.tar.gz
2026-03-05 22:51:45 (37464): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 11:16 start_atlas.sh
2026-03-05 22:51:45 (37464): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 22:51:45 (37464): VM Completion File Detected.
2026-03-05 22:51:45 (37464): Powering off VM.
2026-03-05 22:51:46 (37464): Successfully stopped VM.
2026-03-05 22:51:46 (37464): Deregistering VM. (boinc_7f3c6e4eabbbe6ee, slot#2)
2026-03-05 22:51:46 (37464): Removing network bandwidth throttle group from VM.
2026-03-05 22:51:46 (37464): Removing VM from VirtualBox.
2026-03-05 22:51:51 (37464): called boinc_finish(0)

</stderr_txt>
]]>

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