Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-08 04:27:02 (95480): vboxwrapper version 26210
2026-03-08 04:27:02 (95480): BOINC client version: 8.2.8
2026-03-08 04:27:02 (95480): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-08 04:27:03 (95480): Successfully copied 'init_data.xml' to the shared directory.
2026-03-08 04:27:03 (95480): Create VM. (boinc_fd8fcfc97028380e, slot#0)
2026-03-08 04:27:03 (95480): Setting Memory Size for VM. (4100MB)
2026-03-08 04:27:04 (95480): Setting CPU Count for VM. (1)
2026-03-08 04:27:04 (95480): Setting Chipset Options for VM.
2026-03-08 04:27:04 (95480): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-08 04:27:05 (95480): Setting Boot Options for VM.
2026-03-08 04:27:05 (95480): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-08 04:27:05 (95480): Enabling VM Network Access.
2026-03-08 04:27:06 (95480): Disabling USB Support for VM.
2026-03-08 04:27:06 (95480): Disabling COM Port Support for VM.
2026-03-08 04:27:06 (95480): Disabling LPT Port Support for VM.
2026-03-08 04:27:06 (95480): Disabling Audio Support for VM.
2026-03-08 04:27:07 (95480): Disabling Clipboard Support for VM.
2026-03-08 04:27:07 (95480): Disabling Drag and Drop Support for VM.
2026-03-08 04:27:07 (95480): Adding storage controller(s) to VM.
2026-03-08 04:27:07 (95480): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-08 04:27:09 (95480): Adding VirtualBox Guest Additions to VM.
2026-03-08 04:27:10 (95480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-08 04:27:10 (95480): forwarding host port 51798 to guest port 80
2026-03-08 04:27:10 (95480): Enabling remote desktop for VM.
2026-03-08 04:27:10 (95480): Required extension pack not installed, remote desktop not enabled.
2026-03-08 04:27:10 (95480): Enabling shared directory for VM.
2026-03-08 04:27:11 (95480): Starting VM using VBoxManage interface. (boinc_fd8fcfc97028380e, slot#0)
2026-03-08 04:27:19 (95480): Successfully started VM. (PID = '96336')
2026-03-08 04:27:19 (95480): Reporting VM Process ID to BOINC.
2026-03-08 04:27:19 (95480): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-08 04:27:19 (95480): Guest Log: CPUID EDX: 0x178bfbff
2026-03-08 04:27:19 (95480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-08 04:27:19 (95480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-08 04:27:19 (95480): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-08 04:27:19 (95480): Detected: Web Application Enabled (http://localhost:51798)
2026-03-08 04:27:19 (95480): Preference change detected
2026-03-08 04:27:19 (95480): Setting CPU throttle for VM. (100%)
2026-03-08 04:27:20 (95480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-08 04:27:21 (95480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-08 04:27:21 (95480): Guest Log: BIOS: Booting from Hard Disk...
2026-03-08 04:27:24 (95480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-08 04:27:24 (95480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-08 04:27:24 (95480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-08 04:27:27 (95480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-08 04:27:27 (95480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-08 04:27:33 (95480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000098 main     Log opened 2026-03-08T04:27:31.737102000Z
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000172 main     OS Product: Linux
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000201 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000224 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000248 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000248 main     Process ID: 1248
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.000249 main     Package type: LINUX_64BITS_GENERIC
2026-03-08 04:27:33 (95480): Guest Log: 00:00:00.001853 main     5.2.32 r132073 started. Verbose level = 0
2026-03-08 04:27:34 (95480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-08 04:27:34 (95480): Guest Log: [INFO] Mounting shared directory
2026-03-08 04:27:34 (95480): Guest Log: [INFO] Checking for init_data.xml
2026-03-08 04:27:39 (95480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-08 04:27:39 (95480): Guest Log: [INFO] Detected branch: prod
2026-03-08 04:27:40 (95480): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-08 04:27:40 (95480): Guest Log: Copying input files
2026-03-08 04:27:40 (95480): Guest Log: Copied input files into RunAtlas.
2026-03-08 04:27:40 (95480): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-08 04:27:40 (95480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-08 04:27:40 (95480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-08 04:27:40 (95480): Guest Log: Further information can be found at the LHC@home message board.
2026-03-08 04:27:44 (95480): Guest Log: 00:00:10.016361 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 212 236 858 000ns (GuestNow=1 772 969 263 989 098 000 ns GuestLast=1 772 944 051 752 240 000 ns fSetTimeLastLoop=true )
2026-03-08 04:27:52 (95480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-08 04:27:53 (95480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-08 04:27:53 (95480): Guest Log: 2.6.3.0 1524 0 32096 157038 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-08 04:27:57 (95480): Guest Log: copied the webapp to /var/www
2026-03-08 04:27:57 (95480): Guest Log: core_number=1
2026-03-08 04:27:57 (95480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-08 04:27:57 (95480): Guest Log:  *** Starting ATLAS job. (PandaID=7041336741 taskID=48700874) ***
2026-03-08 04:29:39 (95480): VM state change detected. (old = 'running', new = 'paused')
2026-03-08 12:43:04 (95480): VM state change detected. (old = 'paused', new = 'running')
2026-03-08 12:43:09 (95480): Guest Log: 00:02:10.028884 timesync vgsvcTimeSyncWorker: Radical host time change: 29 615 310 000 000ns (HostNow=1 772 998 989 301 000 000 ns HostLast=1 772 969 373 991 000 000 ns)
2026-03-08 12:43:19 (95480): Guest Log: 00:02:20.038988 timesync vgsvcTimeSyncWorker: Radical guest time change: 29 615 309 747 000ns (GuestNow=1 772 998 999 311 109 000 ns GuestLast=1 772 969 384 001 362 000 ns fSetTimeLastLoop=true )
2026-03-08 14:20:51 (95480): Status Report: Elapsed Time: '6000.000000'
2026-03-08 14:20:51 (95480): Status Report: CPU Time: '5882.250000'
2026-03-08 16:00:55 (95480): Status Report: Elapsed Time: '12000.000000'
2026-03-08 16:00:55 (95480): Status Report: CPU Time: '11838.375000'
2026-03-08 17:41:00 (95480): Status Report: Elapsed Time: '18000.000000'
2026-03-08 17:41:00 (95480): Status Report: CPU Time: '17802.140625'
2026-03-08 19:21:04 (95480): Status Report: Elapsed Time: '24000.000000'
2026-03-08 19:21:04 (95480): Status Report: CPU Time: '23789.859375'
2026-03-08 20:22:19 (95480): Guest Log:  *** Job finished ***
2026-03-08 20:22:19 (95480): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:06,165 | INFO     | all workflow threads have been joined
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:06,165 | INFO     | end of generic workflow (traces error code: 0)
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:06,165 | INFO     | traces error code: 0
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:06,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,996 | INFO     | PID=5879 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,997 | INFO     | found 0 job(s) in 20 queues
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:18,997 | INFO     | [monitor] control thread has ended
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,065 [wrapper] ==== pilot stdout END ====
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,067 [wrapper] ==== wrapper stdout RESUME ====
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,069 [wrapper] pilotpid: 5879
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,072 [wrapper] Pilot exit status: 0
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,133 [wrapper] pandaids: 7041336741
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,148 [wrapper] cleanup supervisor_pilot 31854 5880
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,151 [wrapper] Test setup, not cleaning
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,153 [wrapper] apfmon messages muted
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,156 [wrapper] ==== wrapper stdout END ====
2026-03-08 20:22:19 (95480): Guest Log: 2026-03-09 03:22:19,158 [wrapper] ==== wrapper stderr END ====
2026-03-08 20:22:19 (95480): Guest Log:  *** Error codes and diagnostics ***
2026-03-08 20:22:19 (95480): Guest Log:     "exeErrorCode": 0,
2026-03-08 20:22:19 (95480): Guest Log:     "exeErrorDiag": "",
2026-03-08 20:22:19 (95480): Guest Log:     "pilotErrorCode": 0,
2026-03-08 20:22:19 (95480): Guest Log:     "pilotErrorDiag": "",
2026-03-08 20:22:19 (95480): Guest Log:  *** Listing of results directory ***
2026-03-08 20:22:19 (95480): Guest Log: total 152884
2026-03-08 20:22:19 (95480): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 08:05 queuedata.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 08:05 pilot3.tar.gz
2026-03-08 20:22:19 (95480): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 08:05 runpilot2-wrapper.sh
2026-03-08 20:22:19 (95480): Guest Log: -rwxr-xr-x. 1 atlas atlas      8720 Mar  8 11:27 init_data.xml
2026-03-08 20:22:19 (95480): Guest Log: -rwxr-xr-x. 1 atlas atlas    597958 Mar  8 11:27 input.tar.gz
2026-03-08 20:22:19 (95480): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  8 11:27 start_atlas.sh
2026-03-08 20:22:19 (95480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  8 11:27 EVNT.48700872._000132.pool.root.1 -> /data/./ATLAS.root_0
2026-03-08 20:22:19 (95480): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Mar  8 11:27 pandaJob.out
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas    999177 Mar  8 11:28 agis_schedconf.cvmfs.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas       426 Mar  8 11:29 workernode_map.json
2026-03-08 20:22:19 (95480): Guest Log: drwx------. 5 atlas atlas      4096 Mar  8 11:29 pilot3
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas 143945659 Mar  9 03:21 HITS.48700874._003396.pool.root.1
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas      1027 Mar  9 03:21 memory_monitor_summary.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 03:21 agis_ddmendpoints.agis.ALL.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas    537292 Mar  9 03:21 log.48700874._003396.job.log.tgz.1
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas      6367 Mar  9 03:21 heartbeat.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas        98 Mar  9 03:22 pilot_heartbeat.json
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas       744 Mar  9 03:22 pilotlog.txt
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas   3840181 Mar  9 03:22 log.48700874._003396.job.log.1
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas       357 Mar  9 03:22 output.list
2026-03-08 20:22:19 (95480): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  9 03:22 runtime_log
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas   4392960 Mar  9 03:22 result.tar.gz
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas       652 Mar  9 03:22 tD6MDmAtII9n9Rq4apOajLDm4fhM0noT9bVooX4SDmT9KLDmSPCFNo.diag
2026-03-08 20:22:19 (95480): Guest Log: -rw-r--r--. 1 atlas atlas      8616 Mar  9 03:22 runtime_log.err
2026-03-08 20:22:19 (95480): Guest Log: Looking for outputfile HITS.48700874._003396.pool.root.1
2026-03-08 20:22:19 (95480): Guest Log: HITS file was successfully produced
2026-03-08 20:22:19 (95480): Guest Log: -rw-------. 1 atlas atlas 143945659 Mar  9 03:21 /home/atlas/RunAtlas/HITS.48700874._003396.pool.root.1
2026-03-08 20:22:20 (95480): Guest Log: Successfully finished the ATLAS job!
2026-03-08 20:22:20 (95480): Guest Log: Copying the results back to the shared directory!
2026-03-08 20:22:20 (95480): Guest Log:  *** Contents of shared directory: ***
2026-03-08 20:22:20 (95480): Guest Log: total 328960
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root 187883721 Mar  8 11:27 ATLAS.root_0
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root 143945659 Mar  9 03:22 HITS.pool.root.1
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root      8720 Mar  8 11:27 init_data.xml
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root    597958 Mar  5 11:17 input.tar.gz
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root   4392960 Mar  9 03:22 result.tar.gz
2026-03-08 20:22:20 (95480): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 11:17 start_atlas.sh
2026-03-08 20:22:20 (95480): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-08 20:22:20 (95480): VM Completion File Detected.
2026-03-08 20:22:20 (95480): Powering off VM.
2026-03-08 20:22:21 (95480): Successfully stopped VM.
2026-03-08 20:22:21 (95480): Deregistering VM. (boinc_fd8fcfc97028380e, slot#0)
2026-03-08 20:22:21 (95480): Removing network bandwidth throttle group from VM.
2026-03-08 20:22:21 (95480): Removing VM from VirtualBox.
2026-03-08 20:22:26 (95480): called boinc_finish(0)

</stderr_txt>
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