Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 22:51:55 (50296): vboxwrapper version 26210
2026-03-05 22:51:55 (50296): BOINC client version: 8.2.8
2026-03-05 22:51:56 (50296): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-05 22:51:56 (50296): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 22:51:56 (50296): Create VM. (boinc_921f3fb2d2d615d7, slot#2)
2026-03-05 22:51:57 (50296): Setting Memory Size for VM. (4100MB)
2026-03-05 22:51:57 (50296): Setting CPU Count for VM. (1)
2026-03-05 22:51:57 (50296): Setting Chipset Options for VM.
2026-03-05 22:51:57 (50296): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 22:51:58 (50296): Setting Boot Options for VM.
2026-03-05 22:51:58 (50296): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 22:51:58 (50296): Enabling VM Network Access.
2026-03-05 22:51:59 (50296): Disabling USB Support for VM.
2026-03-05 22:51:59 (50296): Disabling COM Port Support for VM.
2026-03-05 22:51:59 (50296): Disabling LPT Port Support for VM.
2026-03-05 22:51:59 (50296): Disabling Audio Support for VM.
2026-03-05 22:52:00 (50296): Disabling Clipboard Support for VM.
2026-03-05 22:52:00 (50296): Disabling Drag and Drop Support for VM.
2026-03-05 22:52:00 (50296): Adding storage controller(s) to VM.
2026-03-05 22:52:00 (50296): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 22:52:02 (50296): Adding VirtualBox Guest Additions to VM.
2026-03-05 22:52:03 (50296): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 22:52:03 (50296): forwarding host port 55985 to guest port 80
2026-03-05 22:52:03 (50296): Enabling remote desktop for VM.
2026-03-05 22:52:03 (50296): Required extension pack not installed, remote desktop not enabled.
2026-03-05 22:52:03 (50296): Enabling shared directory for VM.
2026-03-05 22:52:04 (50296): Starting VM using VBoxManage interface. (boinc_921f3fb2d2d615d7, slot#2)
2026-03-05 22:52:12 (50296): Successfully started VM. (PID = '50244')
2026-03-05 22:52:12 (50296): Reporting VM Process ID to BOINC.
2026-03-05 22:52:12 (50296): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-05 22:52:12 (50296): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 22:52:12 (50296): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 22:52:12 (50296): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 22:52:12 (50296): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 22:52:12 (50296): Detected: Web Application Enabled (http://localhost:55985)
2026-03-05 22:52:12 (50296): Preference change detected
2026-03-05 22:52:12 (50296): Setting CPU throttle for VM. (100%)
2026-03-05 22:52:12 (50296): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 22:52:14 (50296): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 22:52:14 (50296): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 22:52:17 (50296): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 22:52:17 (50296): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 22:52:17 (50296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 22:52:20 (50296): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 22:52:20 (50296): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 22:52:26 (50296): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000088 main     Log opened 2026-03-05T22:52:24.597101000Z
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000164 main     OS Product: Linux
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000193 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000217 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000240 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000241 main     Process ID: 1248
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.000242 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 22:52:26 (50296): Guest Log: 00:00:00.001778 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 22:52:26 (50296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 22:52:26 (50296): Guest Log: [INFO] Mounting shared directory
2026-03-05 22:52:26 (50296): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 22:52:32 (50296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 22:52:32 (50296): Guest Log: [INFO] Detected branch: prod
2026-03-05 22:52:32 (50296): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 22:52:32 (50296): Guest Log: Copying input files
2026-03-05 22:52:33 (50296): Guest Log: Copied input files into RunAtlas.
2026-03-05 22:52:33 (50296): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 22:52:33 (50296): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 22:52:33 (50296): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 22:52:33 (50296): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 22:52:36 (50296): Guest Log: 00:00:10.013551 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 687 377 000ns (GuestNow=1 772 779 956 297 462 000 ns GuestLast=1 772 751 144 610 085 000 ns fSetTimeLastLoop=true )
2026-03-05 22:52:56 (50296): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 22:52:56 (50296): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 22:52:56 (50296): Guest Log: 2.6.3.0 1521 0 32088 156947 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 22:52:56 (50296): Guest Log: copied the webapp to /var/www
2026-03-05 22:52:56 (50296): Guest Log: core_number=1
2026-03-05 22:52:57 (50296): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 22:52:57 (50296): Guest Log:  *** Starting ATLAS job. (PandaID=7041336745 taskID=48700874) ***
2026-03-06 00:32:12 (50296): Status Report: Elapsed Time: '6000.000000'
2026-03-06 00:32:12 (50296): Status Report: CPU Time: '5881.828125'
2026-03-06 02:12:17 (50296): Status Report: Elapsed Time: '12000.000000'
2026-03-06 02:12:17 (50296): Status Report: CPU Time: '11872.359375'
2026-03-06 03:52:22 (50296): Status Report: Elapsed Time: '18000.000000'
2026-03-06 03:52:22 (50296): Status Report: CPU Time: '17863.906250'
2026-03-06 05:32:26 (50296): Status Report: Elapsed Time: '24000.000000'
2026-03-06 05:32:26 (50296): Status Report: CPU Time: '23854.484375'
2026-03-06 06:44:59 (50296): Guest Log:  *** Job finished ***
2026-03-06 06:44:59 (50296): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:37,981 | INFO     | all workflow threads have been joined
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:37,981 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:37,981 | INFO     | traces error code: 0
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:37,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,604 | INFO     | PID=5873 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,605 | INFO     | found 0 job(s) in 20 queues
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,605 | INFO     | [monitor] control thread has ended
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,665 [wrapper] ==== pilot stdout END ====
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,667 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,669 [wrapper] pilotpid: 5873
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,671 [wrapper] Pilot exit status: 0
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,729 [wrapper] pandaids: 7041336745
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,743 [wrapper] cleanup supervisor_pilot 32022 5874
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,745 [wrapper] Test setup, not cleaning
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,747 [wrapper] apfmon messages muted
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,749 [wrapper] ==== wrapper stdout END ====
2026-03-06 06:44:59 (50296): Guest Log: 2026-03-06 14:44:58,751 [wrapper] ==== wrapper stderr END ====
2026-03-06 06:44:59 (50296): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 06:44:59 (50296): Guest Log:     "exeErrorCode": 0,
2026-03-06 06:44:59 (50296): Guest Log:     "exeErrorDiag": "",
2026-03-06 06:44:59 (50296): Guest Log:     "pilotErrorCode": 0,
2026-03-06 06:44:59 (50296): Guest Log:     "pilotErrorDiag": "",
2026-03-06 06:44:59 (50296): Guest Log:  *** Listing of results directory ***
2026-03-06 06:44:59 (50296): Guest Log: total 163364
2026-03-06 06:44:59 (50296): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 08:05 queuedata.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 08:05 pilot3.tar.gz
2026-03-06 06:44:59 (50296): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 08:05 runpilot2-wrapper.sh
2026-03-06 06:44:59 (50296): Guest Log: -rwxr-xr-x. 1 atlas atlas      8718 Mar  6 06:52 init_data.xml
2026-03-06 06:44:59 (50296): Guest Log: -rwxr-xr-x. 1 atlas atlas    597960 Mar  6 06:52 input.tar.gz
2026-03-06 06:44:59 (50296): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 06:52 start_atlas.sh
2026-03-06 06:44:59 (50296): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 06:52 EVNT.48700872._000132.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 06:44:59 (50296): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Mar  6 06:52 pandaJob.out
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas    998544 Mar  6 06:53 agis_schedconf.cvmfs.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas       426 Mar  6 06:53 workernode_map.json
2026-03-06 06:44:59 (50296): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 06:53 pilot3
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas 154486522 Mar  6 14:44 HITS.48700874._003400.pool.root.1
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas      1027 Mar  6 14:44 memory_monitor_summary.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 14:44 agis_ddmendpoints.agis.ALL.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas    547921 Mar  6 14:44 log.48700874._003400.job.log.tgz.1
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas      6369 Mar  6 14:44 heartbeat.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas        95 Mar  6 14:44 pilot_heartbeat.json
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas       744 Mar  6 14:44 pilotlog.txt
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas   3922420 Mar  6 14:44 log.48700874._003400.job.log.1
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 14:44 output.list
2026-03-06 06:44:59 (50296): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 14:44 runtime_log
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas   4485120 Mar  6 14:44 result.tar.gz
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas       652 Mar  6 14:44 t38MDmAtII9n9Rq4apOajLDm4fhM0noT9bVooX4SDmV9KLDmEoDUDm.diag
2026-03-06 06:44:59 (50296): Guest Log: -rw-r--r--. 1 atlas atlas      8616 Mar  6 14:44 runtime_log.err
2026-03-06 06:44:59 (50296): Guest Log: Looking for outputfile HITS.48700874._003400.pool.root.1
2026-03-06 06:44:59 (50296): Guest Log: HITS file was successfully produced
2026-03-06 06:44:59 (50296): Guest Log: -rw-------. 1 atlas atlas 154486522 Mar  6 14:44 /home/atlas/RunAtlas/HITS.48700874._003400.pool.root.1
2026-03-06 06:45:00 (50296): Guest Log: Successfully finished the ATLAS job!
2026-03-06 06:45:00 (50296): Guest Log: Copying the results back to the shared directory!
2026-03-06 06:45:00 (50296): Guest Log:  *** Contents of shared directory: ***
2026-03-06 06:45:00 (50296): Guest Log: total 339344
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root 187883721 Mar  6 06:51 ATLAS.root_0
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root 154486522 Mar  6 14:44 HITS.pool.root.1
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root      8718 Mar  6 06:51 init_data.xml
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root    597960 Mar  5 11:17 input.tar.gz
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root   4485120 Mar  6 14:44 result.tar.gz
2026-03-06 06:45:00 (50296): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 11:17 start_atlas.sh
2026-03-06 06:45:00 (50296): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 06:45:00 (50296): VM Completion File Detected.
2026-03-06 06:45:00 (50296): Powering off VM.
2026-03-06 06:45:00 (50296): Successfully stopped VM.
2026-03-06 06:45:00 (50296): Deregistering VM. (boinc_921f3fb2d2d615d7, slot#2)
2026-03-06 06:45:00 (50296): Removing network bandwidth throttle group from VM.
2026-03-06 06:45:01 (50296): Removing VM from VirtualBox.
2026-03-06 06:45:06 (50296): called boinc_finish(0)

</stderr_txt>
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