Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 04:49:47 (37304): vboxwrapper version 26210
2026-03-05 04:49:47 (37304): BOINC client version: 8.2.8
2026-03-05 04:49:48 (37304): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-05 04:49:49 (37304): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 04:49:49 (37304): Create VM. (boinc_70ae534a817b87bd, slot#2)
2026-03-05 04:49:49 (37304): Setting Memory Size for VM. (4100MB)
2026-03-05 04:49:50 (37304): Setting CPU Count for VM. (1)
2026-03-05 04:49:50 (37304): Setting Chipset Options for VM.
2026-03-05 04:49:50 (37304): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 04:49:50 (37304): Setting Boot Options for VM.
2026-03-05 04:49:51 (37304): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 04:49:51 (37304): Enabling VM Network Access.
2026-03-05 04:49:51 (37304): Disabling USB Support for VM.
2026-03-05 04:49:52 (37304): Disabling COM Port Support for VM.
2026-03-05 04:49:52 (37304): Disabling LPT Port Support for VM.
2026-03-05 04:49:52 (37304): Disabling Audio Support for VM.
2026-03-05 04:49:52 (37304): Disabling Clipboard Support for VM.
2026-03-05 04:49:53 (37304): Disabling Drag and Drop Support for VM.
2026-03-05 04:49:53 (37304): Adding storage controller(s) to VM.
2026-03-05 04:49:53 (37304): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 04:49:55 (37304): Adding VirtualBox Guest Additions to VM.
2026-03-05 04:49:56 (37304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 04:49:56 (37304): forwarding host port 60636 to guest port 80
2026-03-05 04:49:56 (37304): Enabling remote desktop for VM.
2026-03-05 04:49:56 (37304): Required extension pack not installed, remote desktop not enabled.
2026-03-05 04:49:56 (37304): Enabling shared directory for VM.
2026-03-05 04:49:57 (37304): Starting VM using VBoxManage interface. (boinc_70ae534a817b87bd, slot#2)
2026-03-05 04:50:05 (37304): Successfully started VM. (PID = '31576')
2026-03-05 04:50:05 (37304): Reporting VM Process ID to BOINC.
2026-03-05 04:50:05 (37304): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-05 04:50:05 (37304): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 04:50:05 (37304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 04:50:05 (37304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 04:50:05 (37304): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 04:50:05 (37304): Detected: Web Application Enabled (http://localhost:60636)
2026-03-05 04:50:05 (37304): Preference change detected
2026-03-05 04:50:05 (37304): Setting CPU throttle for VM. (100%)
2026-03-05 04:50:05 (37304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 04:50:07 (37304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 04:50:07 (37304): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 04:50:10 (37304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 04:50:10 (37304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 04:50:10 (37304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 04:50:14 (37304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 04:50:14 (37304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 04:50:22 (37304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000100 main     Log opened 2026-03-05T04:50:19.938695000Z
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000182 main     OS Product: Linux
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000214 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000240 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000267 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000268 main     Process ID: 1248
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.000269 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 04:50:22 (37304): Guest Log: 00:00:00.001791 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 04:50:22 (37304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 04:50:22 (37304): Guest Log: [INFO] Mounting shared directory
2026-03-05 04:50:22 (37304): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 04:50:30 (37304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 04:50:30 (37304): Guest Log: [INFO] Detected branch: prod
2026-03-05 04:50:30 (37304): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 04:50:30 (37304): Guest Log: Copying input files
2026-03-05 04:50:32 (37304): Guest Log: 00:00:10.027754 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 881 145 000ns (GuestNow=1 772 715 031 834 231 000 ns GuestLast=1 772 686 219 953 086 000 ns fSetTimeLastLoop=true )
2026-03-05 04:50:34 (37304): Guest Log: Copied input files into RunAtlas.
2026-03-05 04:50:34 (37304): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 04:50:34 (37304): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 04:50:34 (37304): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 04:50:34 (37304): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 04:50:44 (37304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 04:50:45 (37304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 04:50:45 (37304): Guest Log: 2.6.3.0 1525 0 32092 156920 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 04:50:46 (37304): Guest Log: copied the webapp to /var/www
2026-03-05 04:50:46 (37304): Guest Log: core_number=1
2026-03-05 04:50:47 (37304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 04:50:47 (37304): Guest Log:  *** Starting ATLAS job. (PandaID=7038573777 taskID=48955015) ***
2026-03-05 06:30:10 (37304): Status Report: Elapsed Time: '6000.000000'
2026-03-05 06:30:10 (37304): Status Report: CPU Time: '5906.375000'
2026-03-05 08:10:14 (37304): Status Report: Elapsed Time: '12000.000000'
2026-03-05 08:10:14 (37304): Status Report: CPU Time: '11894.234375'
2026-03-05 09:50:19 (37304): Status Report: Elapsed Time: '18000.000000'
2026-03-05 09:50:19 (37304): Status Report: CPU Time: '17882.031250'
2026-03-05 11:30:24 (37304): Status Report: Elapsed Time: '24000.000000'
2026-03-05 11:30:24 (37304): Status Report: CPU Time: '23863.734375'
2026-03-05 13:10:29 (37304): Status Report: Elapsed Time: '30000.000000'
2026-03-05 13:10:29 (37304): Status Report: CPU Time: '29851.500000'
2026-03-05 13:43:16 (37304): Guest Log:  *** Job finished ***
2026-03-05 13:43:16 (37304): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:42:23,541 | INFO     | [data] copytool_out thread has finished
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:42:25,023 | INFO     | [data] queue_monitor thread has finished
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:09,437 | INFO     | [monitor] cgroup control has ended
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:11,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109945276224)>', '<ExcThread(monitor, started 140109634574080)>']
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:12,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:12,110 | INFO     | [monitor] control thread has ended
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,510 | INFO     | all workflow threads have been joined
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,510 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,510 | INFO     | traces error code: 0
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,576 [wrapper] ==== pilot stdout END ====
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,579 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,582 [wrapper] pilotpid: 5875
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,584 [wrapper] Pilot exit status: 0
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,646 [wrapper] pandaids: 7038573777
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,664 [wrapper] cleanup supervisor_pilot   684 5876
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,667 [wrapper] Test setup, not cleaning
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,669 [wrapper] apfmon messages muted
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,672 [wrapper] ==== wrapper stdout END ====
2026-03-05 13:43:16 (37304): Guest Log: 2026-03-05 21:43:16,674 [wrapper] ==== wrapper stderr END ====
2026-03-05 13:43:16 (37304): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 13:43:16 (37304): Guest Log:     "exeErrorCode": 0,
2026-03-05 13:43:16 (37304): Guest Log:     "exeErrorDiag": "",
2026-03-05 13:43:16 (37304): Guest Log:     "pilotErrorCode": 0,
2026-03-05 13:43:16 (37304): Guest Log:     "pilotErrorDiag": "",
2026-03-05 13:43:16 (37304): Guest Log:  *** Listing of results directory ***
2026-03-05 13:43:16 (37304): Guest Log: total 190180
2026-03-05 13:43:16 (37304): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 08:05 queuedata.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 08:05 pilot3.tar.gz
2026-03-05 13:43:16 (37304): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 08:05 runpilot2-wrapper.sh
2026-03-05 13:43:16 (37304): Guest Log: -rwxr-xr-x. 1 atlas atlas      8718 Mar  5 12:50 init_data.xml
2026-03-05 13:43:16 (37304): Guest Log: -rwxr-xr-x. 1 atlas atlas    597947 Mar  5 12:50 input.tar.gz
2026-03-05 13:43:16 (37304): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 12:50 start_atlas.sh
2026-03-05 13:43:16 (37304): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 12:50 EVNT.46701403._002131.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 13:43:16 (37304): Guest Log: -rw-r--r--. 1 atlas atlas      2569 Mar  5 12:50 pandaJob.out
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas    998459 Mar  5 12:51 agis_schedconf.cvmfs.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas       426 Mar  5 12:51 workernode_map.json
2026-03-05 13:43:16 (37304): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 12:51 pilot3
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas 180818548 Mar  5 21:41 HITS.48955015._004324.pool.root.1
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 21:42 pilot_heartbeat.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas      1027 Mar  5 21:42 memory_monitor_summary.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 21:42 agis_ddmendpoints.agis.ALL.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas    612041 Mar  5 21:42 log.48955015._004324.job.log.tgz.1
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas      6369 Mar  5 21:42 heartbeat.json
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  5 21:43 pilotlog.txt
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas   4413581 Mar  5 21:43 log.48955015._004324.job.log.1
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 21:43 output.list
2026-03-05 13:43:16 (37304): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 21:43 runtime_log
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas   5048320 Mar  5 21:43 result.tar.gz
2026-03-05 13:43:16 (37304): Guest Log: -rw-r--r--. 1 atlas atlas      8616 Mar  5 21:43 runtime_log.err
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas       652 Mar  5 21:43 1QbNDmStII9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmBNLDmwbZ5ym.diag
2026-03-05 13:43:16 (37304): Guest Log: Looking for outputfile HITS.48955015._004324.pool.root.1
2026-03-05 13:43:16 (37304): Guest Log: HITS file was successfully produced
2026-03-05 13:43:16 (37304): Guest Log: -rw-------. 1 atlas atlas 180818548 Mar  5 21:41 /home/atlas/RunAtlas/HITS.48955015._004324.pool.root.1
2026-03-05 13:43:17 (37304): Guest Log: Successfully finished the ATLAS job!
2026-03-05 13:43:17 (37304): Guest Log: Copying the results back to the shared directory!
2026-03-05 13:43:17 (37304): Guest Log:  *** Contents of shared directory: ***
2026-03-05 13:43:17 (37304): Guest Log: total 612800
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root 441006713 Mar  5 12:49 ATLAS.root_0
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root 180818548 Mar  5 21:43 HITS.pool.root.1
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root      8718 Mar  5 12:49 init_data.xml
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root    597947 Mar  5 11:18 input.tar.gz
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root   5048320 Mar  5 21:43 result.tar.gz
2026-03-05 13:43:17 (37304): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 11:18 start_atlas.sh
2026-03-05 13:43:17 (37304): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 13:43:17 (37304): VM Completion File Detected.
2026-03-05 13:43:17 (37304): Powering off VM.
2026-03-05 13:43:18 (37304): Successfully stopped VM.
2026-03-05 13:43:18 (37304): Deregistering VM. (boinc_70ae534a817b87bd, slot#2)
2026-03-05 13:43:18 (37304): Removing network bandwidth throttle group from VM.
2026-03-05 13:43:18 (37304): Removing VM from VirtualBox.
2026-03-05 13:43:24 (37304): called boinc_finish(0)

</stderr_txt>
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