Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 19:51:56 (23580): vboxwrapper version 26210
2026-03-05 19:51:56 (23580): BOINC client version: 8.2.8
2026-03-05 19:51:57 (23580): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2026-03-05 19:51:57 (23580): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 19:51:57 (23580): Create VM. (boinc_5491ec4b255113e0, slot#2)
2026-03-05 19:51:58 (23580): Setting Memory Size for VM. (4800MB)
2026-03-05 19:51:58 (23580): Setting CPU Count for VM. (8)
2026-03-05 19:51:58 (23580): Setting Chipset Options for VM.
2026-03-05 19:51:59 (23580): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 19:51:59 (23580): Setting Boot Options for VM.
2026-03-05 19:51:59 (23580): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 19:52:00 (23580): Enabling VM Network Access.
2026-03-05 19:52:00 (23580): Disabling USB Support for VM.
2026-03-05 19:52:00 (23580): Disabling COM Port Support for VM.
2026-03-05 19:52:00 (23580): Disabling LPT Port Support for VM.
2026-03-05 19:52:01 (23580): Disabling Audio Support for VM.
2026-03-05 19:52:01 (23580): Disabling Clipboard Support for VM.
2026-03-05 19:52:01 (23580): Disabling Drag and Drop Support for VM.
2026-03-05 19:52:01 (23580): Adding storage controller(s) to VM.
2026-03-05 19:52:02 (23580): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 19:52:02 (23580): Adding VirtualBox Guest Additions to VM.
2026-03-05 19:52:02 (23580): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 19:52:03 (23580): forwarding host port 53950 to guest port 80
2026-03-05 19:52:03 (23580): Enabling remote desktop for VM.
2026-03-05 19:52:03 (23580): Required extension pack not installed, remote desktop not enabled.
2026-03-05 19:52:03 (23580): Enabling shared directory for VM.
2026-03-05 19:52:04 (23580): Starting VM using VBoxManage interface. (boinc_5491ec4b255113e0, slot#2)
2026-03-05 19:52:12 (23580): Successfully started VM. (PID = '29116')
2026-03-05 19:52:12 (23580): Reporting VM Process ID to BOINC.
2026-03-05 19:52:12 (23580): Guest Log: BIOS: VirtualBox 7.0.10
2026-03-05 19:52:12 (23580): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 19:52:12 (23580): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 19:52:12 (23580): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 19:52:12 (23580): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 19:52:12 (23580): Detected: Web Application Enabled (http://localhost:53950)
2026-03-05 19:52:12 (23580): Preference change detected
2026-03-05 19:52:12 (23580): Setting CPU throttle for VM. (100%)
2026-03-05 19:52:13 (23580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 19:52:14 (23580): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 19:52:14 (23580): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 19:52:17 (23580): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 19:52:17 (23580): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 19:52:17 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 19:52:18 (23580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 19:52:24 (23580): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 19:52:24 (23580): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 19:52:33 (23580): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000206 main     Log opened 2026-03-05T19:52:30.773846000Z
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000445 main     OS Product: Linux
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000513 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000569 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000625 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000626 main     Process ID: 1374
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.000627 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 19:52:33 (23580): Guest Log: 00:00:00.002531 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 19:52:34 (23580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 19:52:34 (23580): Guest Log: [INFO] Mounting shared directory
2026-03-05 19:52:34 (23580): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 19:52:38 (23580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 19:52:38 (23580): Guest Log: [INFO] Detected branch: prod
2026-03-05 19:52:38 (23580): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 19:52:38 (23580): Guest Log: Copying input files
2026-03-05 19:52:41 (23580): Guest Log: Copied input files into RunAtlas.
2026-03-05 19:52:41 (23580): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 19:52:41 (23580): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 19:52:42 (23580): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 19:52:42 (23580): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 19:52:44 (23580): Guest Log: 00:00:10.008832 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 737 315 000ns (GuestNow=1 772 733 163 041 047 000 ns GuestLast=1 772 740 350 778 362 000 ns fSetTimeLastLoop=true )
2026-03-05 19:52:52 (23580): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 19:52:53 (23580): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 19:52:53 (23580): Guest Log: 2.6.3.0 1652 0 30200 156928 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 19:52:54 (23580): Guest Log: copied the webapp to /var/www
2026-03-05 19:52:54 (23580): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-05 19:52:54 (23580): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-05 19:52:55 (23580): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 19:52:55 (23580): Guest Log:  *** Starting ATLAS job. (PandaID=7041271216 taskID=48838536) ***
2026-03-05 21:32:22 (23580): Status Report: Elapsed Time: '6000.000000'
2026-03-05 21:32:22 (23580): Status Report: CPU Time: '41787.203125'
2026-03-05 23:12:35 (23580): Status Report: Elapsed Time: '12000.000000'
2026-03-05 23:12:35 (23580): Status Report: CPU Time: '88989.875000'
2026-03-06 00:23:04 (23580): Guest Log:  *** Job finished ***
2026-03-06 00:23:04 (23580): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:34,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:34,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:53,772 | INFO     | [monitor] cgroup control has ended
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:55,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040832108352)>', '<ExcThread(monitor, started 140039849748224)>']
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:56,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:22:56,540 | INFO     | [monitor] control thread has ended
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,792 | INFO     | all workflow threads have been joined
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,792 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,793 | INFO     | traces error code: 0
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,937 [wrapper] ==== pilot stdout END ====
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,948 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,958 [wrapper] pilotpid: 6104
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:00,969 [wrapper] Pilot exit status: 0
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,106 [wrapper] pandaids: 7041271216
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,180 [wrapper] cleanup supervisor_pilot 28581 6105
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,190 [wrapper] Test setup, not cleaning
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,198 [wrapper] apfmon messages muted
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,207 [wrapper] ==== wrapper stdout END ====
2026-03-06 00:23:04 (23580): Guest Log: 2026-03-05 22:23:01,217 [wrapper] ==== wrapper stderr END ====
2026-03-06 00:23:04 (23580): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 00:23:04 (23580): Guest Log:     "exeErrorCode": 0,
2026-03-06 00:23:04 (23580): Guest Log:     "exeErrorDiag": "",
2026-03-06 00:23:04 (23580): Guest Log:     "pilotErrorCode": 0,
2026-03-06 00:23:04 (23580): Guest Log:     "pilotErrorDiag": "",
2026-03-06 00:23:04 (23580): Guest Log:  *** Listing of results directory ***
2026-03-06 00:23:04 (23580): Guest Log: total 209108
2026-03-06 00:23:04 (23580): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 06:14 pilot3.tar.gz
2026-03-06 00:23:04 (23580): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 06:58 runpilot2-wrapper.sh
2026-03-06 00:23:04 (23580): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 06:58 queuedata.json
2026-03-06 00:23:04 (23580): Guest Log: -rwxr-xr-x. 1 atlas atlas      8260 Mar  5 17:52 init_data.xml
2026-03-06 00:23:04 (23580): Guest Log: -rwxr-xr-x. 1 atlas atlas    597969 Mar  5 17:52 input.tar.gz
2026-03-06 00:23:04 (23580): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 17:52 start_atlas.sh
2026-03-06 00:23:04 (23580): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 17:52 EVNT.48343704._000100.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 00:23:04 (23580): Guest Log: -rw-r--r--. 1 atlas atlas      2574 Mar  5 17:52 pandaJob.out
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas    998462 Mar  5 17:54 agis_schedconf.cvmfs.json
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas       445 Mar  5 17:54 workernode_map.json
2026-03-06 00:23:04 (23580): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 17:54 pilot3
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas 204863381 Mar  5 22:21 HITS.48838536._002662.pool.root.1
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas      1053 Mar  5 22:21 memory_monitor_summary.json
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 22:21 agis_ddmendpoints.agis.ALL.json
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas    496344 Mar  5 22:21 log.48838536._002662.job.log.tgz.1
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas      6417 Mar  5 22:22 heartbeat.json
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 22:22 pilot_heartbeat.json
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas      4987 Mar  5 22:23 pilotlog.txt
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas   2203629 Mar  5 22:23 log.48838536._002662.job.log.1
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 22:23 output.list
2026-03-06 00:23:04 (23580): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 22:23 runtime_log
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas   2713600 Mar  5 22:23 result.tar.gz
2026-03-06 00:23:04 (23580): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Mar  5 22:23 runtime_log.err
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas       661 Mar  5 22:23 K3aMDmVqHI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmE3MLDmoXQKrn.diag
2026-03-06 00:23:04 (23580): Guest Log: Looking for outputfile HITS.48838536._002662.pool.root.1
2026-03-06 00:23:04 (23580): Guest Log: HITS file was successfully produced
2026-03-06 00:23:04 (23580): Guest Log: -rw-------. 1 atlas atlas 204863381 Mar  5 22:21 /home/atlas/RunAtlas/HITS.48838536._002662.pool.root.1
2026-03-06 00:23:06 (23580): Guest Log: Successfully finished the ATLAS job!
2026-03-06 00:23:06 (23580): Guest Log: Copying the results back to the shared directory!
2026-03-06 00:23:06 (23580): Guest Log:  *** Contents of shared directory: ***
2026-03-06 00:23:06 (23580): Guest Log: total 464856
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root 267801693 Mar  5 17:51 ATLAS.root_0
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root 204863381 Mar  5 22:23 HITS.pool.root.1
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root      8260 Mar  5 17:51 init_data.xml
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root    597969 Mar  5 10:25 input.tar.gz
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root   2713600 Mar  5 22:23 result.tar.gz
2026-03-06 00:23:06 (23580): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 10:25 start_atlas.sh
2026-03-06 00:23:06 (23580): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 00:23:06 (23580): VM Completion File Detected.
2026-03-06 00:23:06 (23580): Powering off VM.
2026-03-06 00:23:07 (23580): Successfully stopped VM.
2026-03-06 00:23:07 (23580): Deregistering VM. (boinc_5491ec4b255113e0, slot#2)
2026-03-06 00:23:07 (23580): Removing network bandwidth throttle group from VM.
2026-03-06 00:23:07 (23580): Removing VM from VirtualBox.
2026-03-06 00:23:12 (23580): called boinc_finish(0)

</stderr_txt>
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