Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:30 (1322158): wrapper (7.7.26015): starting
01:04:30 (1322158): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 01:04:30] Arguments: --nthreads 8
[2026-03-05 01:04:30] Threads: 8
[2026-03-05 01:04:30] Checking for CVMFS
[2026-03-05 01:04:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 01:04:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 01:04:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 01:04:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 01:04:32] 2.13.3.0 11235 170531 531368 156905 2 738 25606862 32935937 50349 16776704 0 1299202526 99.584 1406146927 25281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-05 01:04:32] CVMFS is ok
[2026-03-05 01:04:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 01:04:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 01:04:32] Further information can be found at the LHC@home message board.
[2026-03-05 01:04:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 01:04:32] Checking for apptainer binary...
[2026-03-05 01:04:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 01:04:32] Running /usr/bin/apptainer --version
[2026-03-05 01:04:32] apptainer version 1.4.5-2.el9
[2026-03-05 01:04:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 01:04:33] c7-2-37.aglt2.org
[2026-03-05 01:04:33] apptainer works
[2026-03-05 01:04:33] Set ATHENA_PROC_NUMBER=8
[2026-03-05 01:04:33] Set ATHENA_CORE_NUMBER=8
[2026-03-05 01:04:33] Starting ATLAS job with PandaID=7038498956
[2026-03-05 01:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 03:25:47]  *** The last 200 lines of the pilot log: ***
[2026-03-05 03:25:47] 2026-03-05 08:24:51,588 | INFO     | mean y: 2442731.015151515
[2026-03-05 03:25:47] 2026-03-05 08:24:51,588 | INFO     | intersect: -70960297158.92758
[2026-03-05 03:25:47] 2026-03-05 08:24:51,588 | INFO     | chi2: 2.1238985517706244
[2026-03-05 03:25:47] 2026-03-05 08:24:51,588 | INFO     | current chi2=2.1238985517706244 (change=41.818959587947774 %)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,589 | INFO     | sum of square deviations: 635266025.7637776
[2026-03-05 03:25:47] 2026-03-05 08:24:51,589 | INFO     | sum of deviations: 27246239859.69292
[2026-03-05 03:25:47] 2026-03-05 08:24:51,589 | INFO     | mean x: 1772694607.6771653
[2026-03-05 03:25:47] 2026-03-05 08:24:51,589 | INFO     | mean y: 2440174.4803149607
[2026-03-05 03:25:47] 2026-03-05 08:24:51,589 | INFO     | intersect: -76027538637.44542
[2026-03-05 03:25:47] 2026-03-05 08:24:51,612 | INFO     | chi2: 2.1273936821437736
[2026-03-05 03:25:47] 2026-03-05 08:24:51,612 | INFO     | current chi2=2.1273936821437736 (change=-0.16456202064055347 %)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,612 | INFO     | right removable region: 126
[2026-03-05 03:25:47] 2026-03-05 08:24:51,612 | INFO     | sum of square deviations: 713271679.1818188
[2026-03-05 03:25:47] 2026-03-05 08:24:51,613 | INFO     | sum of deviations: -15782083553.63636
[2026-03-05 03:25:47] 2026-03-05 08:24:51,613 | INFO     | mean x: 1772695065.2272727
[2026-03-05 03:25:47] 2026-03-05 08:24:51,613 | INFO     | mean y: 2462400.287878788
[2026-03-05 03:25:47] 2026-03-05 08:24:51,613 | INFO     | intersect: 39225695918.58401
[2026-03-05 03:25:47] 2026-03-05 08:24:51,613 | INFO     | chi2: 1.6425179555291707
[2026-03-05 03:25:47] 2026-03-05 08:24:51,614 | INFO     | current chi2=1.6425179555291707 (change=55.00566471572006 %)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,614 | INFO     | sum of square deviations: 635239683.9370083
[2026-03-05 03:25:47] 2026-03-05 08:24:51,614 | INFO     | sum of deviations: -13285295492.118109
[2026-03-05 03:25:47] 2026-03-05 08:24:51,614 | INFO     | mean x: 1772695217.7480314
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | mean y: 2457470.527559055
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | intersect: 37076305941.84346
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | chi2: 1.6105673266321237
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | current chi2=1.6105673266321237 (change=1.9452225036257507 %)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | left removable region: 20
[2026-03-05 03:25:47] 2026-03-05 08:24:51,615 | INFO     | sum of square deviations: 369373374.83962333
[2026-03-05 03:25:47] 2026-03-05 08:24:51,638 | INFO     | sum of deviations: 1606428531.2452831
[2026-03-05 03:25:47] 2026-03-05 08:24:51,638 | INFO     | mean x: 1772695187.1981132
[2026-03-05 03:25:47] 2026-03-05 08:24:51,638 | INFO     | mean y: 2493692.2264150945
[2026-03-05 03:25:47] 2026-03-05 08:24:51,638 | INFO     | intersect: -7707071533.346981
[2026-03-05 03:25:47] 2026-03-05 08:24:51,638 | INFO     | chi2: 0.00038340910979314357
[2026-03-05 03:25:47] 2026-03-05 08:24:51,639 | INFO     | current memory leak: 4.35 B/s (using 106 data points, chi2=0.00)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,639 | INFO     | could have reported an average CPU frequency of 3333 MHz (8 samples)
[2026-03-05 03:25:47] 2026-03-05 08:24:51,639 | INFO     | ..............................
[2026-03-05 03:25:47] 2026-03-05 08:24:51,639 | INFO     | . Timing measurements:
[2026-03-05 03:25:47] 2026-03-05 08:24:51,639 | INFO     | . get job = 0 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . initial setup = 16 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . payload setup = 24 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . stage-in = 0 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . payload execution = 8326 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . stage-out = 4 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | . log creation = 1 s
[2026-03-05 03:25:47] 2026-03-05 08:24:51,640 | INFO     | ..............................
[2026-03-05 03:25:47] 2026-03-05 08:24:52,741 | WARNING  | process 1350165 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 03:25:47] 2026-03-05 08:24:52,742 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7038498956/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,742 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7038498956/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,742 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-05 03:25:47] 2026-03-05 08:24:52,768 | WARNING  | maxPSS not found in memory monitor output
[2026-03-05 03:25:47] 2026-03-05 08:24:52,768 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4789468 B
[2026-03-05 03:25:47] 2026-03-05 08:24:52,768 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15831 B
[2026-03-05 03:25:47] 2026-03-05 08:24:52,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-05 03:25:47] 2026-03-05 08:24:52,822 | INFO     | 
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | job summary report
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | --------------------------------------------------
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | PanDA job id: 7038498956
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | task id: 48955015
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | errors: (none)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | pilot state: finished 
[2026-03-05 03:25:47] 2026-03-05 08:24:52,845 | INFO     | transexitcode: 0
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | exeerrorcode: 0
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | exeerrordiag: 
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | exitcode: 0
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | exitmsg: OK
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | cpuconsumptiontime: 28444 s
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | nevents: 400
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | neventsw: 0
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | pid: 1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | pgrp: 1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | corecount: 8
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | event service: False
[2026-03-05 03:25:47] 2026-03-05 08:24:52,846 | INFO     | sizes: {0: 2294717, 1: 2295402, 2: 2295863, 8355: 2323561, 8356: 2323560, 8360: 2332614, 8363: 2332798, 8365: 2332992}
[2026-03-05 03:25:47] 2026-03-05 08:24:52,847 | INFO     | --------------------------------------------------
[2026-03-05 03:25:47] 2026-03-05 08:24:52,847 | INFO     | 
[2026-03-05 03:25:47] 2026-03-05 08:24:52,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-05 03:25:47] 2026-03-05 08:24:52,903 | INFO     | sufficient remaining disk space (72807874560 B)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,904 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,905 | INFO     | size of work directory /tmp/boinchome/slots/3/PanDA_Pilot-7038498956: 5113721 B (within 5033164800 B limit)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,905 | INFO     | pfn file=/tmp/boinchome/slots/3/PanDA_Pilot-7038498956/HITS.48955015._000400.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,905 | INFO     | total size of present files: 0 B (workdir size: 5113721 B)
[2026-03-05 03:25:47] 2026-03-05 08:24:52,905 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-7038498956/HITS.48955015._000400.pool.root.1 since it does not exist
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 03:25:47] 2026-03-05 08:24:53,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,089 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 03:25:47] 2026-03-05 08:24:53,089 | INFO     | job 7038498956 has completed (purged errors)
[2026-03-05 03:25:47] 2026-03-05 08:24:53,089 | INFO     | overall cleanup function is called
[2026-03-05 03:25:47] 2026-03-05 08:24:54,227 | INFO     | --- collectZombieJob: --- 10, [1350165]
[2026-03-05 03:25:47] 2026-03-05 08:24:54,227 | INFO     | zombie collector waiting for pid 1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:54,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 03:25:47] 2026-03-05 08:24:54,227 | INFO     | collected zombie processes
[2026-03-05 03:25:47] 2026-03-05 08:24:54,227 | INFO     | will attempt to kill all subprocesses of pid=1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:58,236 | INFO     | number of running child processes to parent process 1350165: 1
[2026-03-05 03:25:47] 2026-03-05 08:24:58,237 | INFO     | maximum number of monitored processes: 6
[2026-03-05 03:25:47] 2026-03-05 08:24:58,237 | INFO     | aborting job monitoring since job object (job id=7038498956) has expired
[2026-03-05 03:25:47] 2026-03-05 08:24:59,040 | INFO     | process IDs to be killed: [1350165] (in reverse order)
[2026-03-05 03:25:47] 2026-03-05 08:24:59,312 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 03:25:47] 2026-03-05 08:24:59,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 03:25:47] 2026-03-05 08:24:59,450 | INFO     | did not find any defunct processes belonging to 1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:59,553 | INFO     | did not find any defunct processes belonging to 1350165
[2026-03-05 03:25:47] 2026-03-05 08:24:59,554 | INFO     | ready for new job
[2026-03-05 03:25:47] 2026-03-05 08:24:59,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 03:25:47] 2026-03-05 08:24:59,579 | INFO     | **************************************
[2026-03-05 03:25:47] 2026-03-05 08:24:59,579 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 03:25:47] 2026-03-05 08:24:59,580 | INFO     | **************************************
[2026-03-05 03:25:47] 2026-03-05 08:24:59,580 | INFO     | 
[2026-03-05 03:25:47] 2026-03-05 08:24:59,608 | INFO     | architecture information:
[2026-03-05 03:25:47] 2026-03-05 08:24:59,617 | INFO     | executing command: cat /etc/os-release
[2026-03-05 03:25:47] 2026-03-05 08:24:59,697 | INFO     | cat /etc/os-release:
[2026-03-05 03:25:47] NAME="CentOS Linux"
[2026-03-05 03:25:47] VERSION="7 (Core)"
[2026-03-05 03:25:47] ID="centos"
[2026-03-05 03:25:47] ID_LIKE="rhel fedora"
[2026-03-05 03:25:47] VERSION_ID="7"
[2026-03-05 03:25:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 03:25:47] ANSI_COLOR="0;31"
[2026-03-05 03:25:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 03:25:47] HOME_URL="https://www.centos.org/"
[2026-03-05 03:25:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 03:25:47] 
[2026-03-05 03:25:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 03:25:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 03:25:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 03:25:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 03:25:47] 
[2026-03-05 03:25:47] 2026-03-05 08:24:59,698 | INFO     | **************************************
[2026-03-05 03:25:47] 2026-03-05 08:25:00,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-05 03:25:47] 2026-03-05 08:25:00,262 | INFO     | sufficient remaining disk space (72814166016 B)
[2026-03-05 03:25:47] 2026-03-05 08:25:00,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 03:25:47] 2026-03-05 08:25:00,263 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 03:25:47] 2026-03-05 08:25:00,263 | INFO     | update_server=False
[2026-03-05 03:25:47] 2026-03-05 08:25:00,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 03:25:47] 2026-03-05 08:25:00,483 | INFO     | all payload control threads have been joined
[2026-03-05 03:25:47] 2026-03-05 08:25:00,742 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 03:25:47] 2026-03-05 08:25:00,742 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 03:25:47] 2026-03-05 08:25:00,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 03:25:47] 2026-03-05 08:25:00,742 | INFO     | will abort loop
[2026-03-05 03:25:47] 2026-03-05 08:25:01,156 | INFO     | all data control threads have been joined
[2026-03-05 03:25:47] 2026-03-05 08:25:01,268 | INFO     | [job] retrieve thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:01,455 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:01,506 | INFO     | [payload] control thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:01,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 03:25:47] 2026-03-05 08:25:01,748 | INFO     | [job] job monitor thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:01,879 | INFO     | all job control threads have been joined
[2026-03-05 03:25:47] 2026-03-05 08:25:01,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 03:25:47] 2026-03-05 08:25:02,024 | INFO     | [data] copytool_in thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 03:25:47] 2026-03-05 08:25:02,167 | INFO     | [data] control thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,476 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,512 | INFO     | [job] validate thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,519 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,680 | INFO     | [payload] failed_post thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,838 | INFO     | [payload] validate_post thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,885 | INFO     | [job] control thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:02,935 | INFO     | [job] queue monitor thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:03,730 | INFO     | [data] copytool_out thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:06,171 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:10,990 | INFO     | job.realtimelogging is not enabled
[2026-03-05 03:25:47] 2026-03-05 08:25:11,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 03:25:47] 2026-03-05 08:25:27,534 | INFO     | PID=1337956 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 03:25:47] 2026-03-05 08:25:27,534 | INFO     | .. there are 76 such processes running
[2026-03-05 03:25:47] 2026-03-05 08:25:27,535 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 03:25:47] 2026-03-05 08:25:27,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 03:25:47] 2026-03-05 08:25:27,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 03:25:47] 2026-03-05 08:25:40,485 | INFO     | [monitor] cgroup control has ended
[2026-03-05 03:25:47] 2026-03-05 08:25:41,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635079235392)>', '<ExcThread(monitor, started 140634568500992)>']
[2026-03-05 03:25:47] 2026-03-05 08:25:41,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 03:25:47] 2026-03-05 08:25:41,619 | INFO     | [monitor] control thread has ended
[2026-03-05 03:25:47] 2026-03-05 08:25:46,119 | INFO     | all workflow threads have been joined
[2026-03-05 03:25:47] 2026-03-05 08:25:46,119 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 03:25:47] 2026-03-05 08:25:46,119 | INFO     | traces error code: 0
[2026-03-05 03:25:47] 2026-03-05 08:25:46,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 03:25:47] 2026-03-05 08:25:46,441 [wrapper] ==== pilot stdout END ====
[2026-03-05 03:25:47] 2026-03-05 08:25:46,447 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 03:25:47] 2026-03-05 08:25:46,451 [wrapper] pilotpid: 1337956
[2026-03-05 03:25:47] 2026-03-05 08:25:46,458 [wrapper] Pilot exit status: 0
[2026-03-05 03:25:47] 2026-03-05 08:25:46,502 [wrapper] pandaids: 7038498956
[2026-03-05 03:25:47] 2026-03-05 08:25:46,789 [wrapper] cleanup supervisor_pilot 2240422 1337957
[2026-03-05 03:25:47] 2026-03-05 08:25:46,810 [wrapper] Test setup, not cleaning
[2026-03-05 03:25:47] 2026-03-05 08:25:46,867 [wrapper] apfmon messages muted
[2026-03-05 03:25:47] 2026-03-05 08:25:46,909 [wrapper] ==== wrapper stdout END ====
[2026-03-05 03:25:47] 2026-03-05 08:25:46,955 [wrapper] ==== wrapper stderr END ====
[2026-03-05 03:25:47]  *** Error codes and diagnostics ***
[2026-03-05 03:25:47]     "exeErrorCode": 0,
[2026-03-05 03:25:47]     "exeErrorDiag": "",
[2026-03-05 03:25:47]     "pilotErrorCode": 0,
[2026-03-05 03:25:47]     "pilotErrorDiag": "",
[2026-03-05 03:25:47]  *** Listing of results directory ***
[2026-03-05 03:25:47] total 615800
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 08:58 pilot3.tar.gz
[2026-03-05 03:25:47] -rwx------. 1 boincer umatlas     36322 Mar  4 08:58 runpilot2-wrapper.sh
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 08:58 queuedata.json
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas       100 Mar  5 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 03:25:47] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  5 01:04 run_atlas
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas       105 Mar  5 01:04 job.xml
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas 440929120 Mar  5 01:04 EVNT.46701403._002050.pool.root.1
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 01:04 start_atlas.sh
[2026-03-05 03:25:47] drwxrwx--x. 2 boincer umatlas      4096 Mar  5 01:04 shared
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas    597944 Mar  5 01:04 input.tar.gz
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas         0 Mar  5 01:04 boinc_lockfile
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas      2569 Mar  5 01:04 pandaJob.out
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas        57 Mar  5 01:04 setup.sh.local
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas    997749 Mar  5 01:05 agis_schedconf.cvmfs.json
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas   1521291 Mar  5 01:05 agis_ddmendpoints.agis.ALL.json
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas       428 Mar  5 01:05 workernode_map.json
[2026-03-05 03:25:47] drwx------. 5 boincer umatlas      4096 Mar  5 01:05 pilot3
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas      6943 Mar  5 03:21 init_data.xml
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas 182776777 Mar  5 03:23 HITS.48955015._000400.pool.root.1
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas       530 Mar  5 03:23 boinc_task_state.xml
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas      1035 Mar  5 03:24 memory_monitor_summary.json
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas    412822 Mar  5 03:24 log.48955015._000400.job.log.tgz.1
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas      6327 Mar  5 03:24 heartbeat.json
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas        95 Mar  5 03:25 pilot_heartbeat.json
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas      8192 Mar  5 03:25 boinc_mmap_file
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas        27 Mar  5 03:25 wrapper_checkpoint.txt
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas      5078 Mar  5 03:25 pilotlog.txt
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas   1052129 Mar  5 03:25 log.48955015._000400.job.log.1
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas       357 Mar  5 03:25 output.list
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas       620 Mar  5 03:25 runtime_log
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas   1484800 Mar  5 03:25 result.tar.gz
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas      9336 Mar  5 03:25 runtime_log.err
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas       652 Mar  5 03:25 76aLDmCv1H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDcKLDm5p8qZm.diag
[2026-03-05 03:25:47] -rw-r--r--. 1 boincer umatlas     21860 Mar  5 03:25 stderr.txt
[2026-03-05 03:25:47] HITS file was successfully produced:
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas 182776777 Mar  5 03:23 shared/HITS.pool.root.1
[2026-03-05 03:25:47]  *** Contents of shared directory: ***
[2026-03-05 03:25:47] total 611152
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas 440929120 Mar  5 01:04 ATLAS.root_0
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas     15845 Mar  5 01:04 start_atlas.sh
[2026-03-05 03:25:47] -rw-r--r--. 2 boincer umatlas    597944 Mar  5 01:04 input.tar.gz
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas 182776777 Mar  5 03:23 HITS.pool.root.1
[2026-03-05 03:25:47] -rw-------. 1 boincer umatlas   1484800 Mar  5 03:25 result.tar.gz
03:25:49 (1322158): run_atlas exited; CPU time 28790.720553
03:25:49 (1322158): called boinc_finish(0)

</stderr_txt>
]]>

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