Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:14 (23101): wrapper (7.7.26015): starting
03:45:14 (23101): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 03:45:14] Arguments: --nthreads 8
[2026-03-05 03:45:14] Threads: 8
[2026-03-05 03:45:14] Checking for CVMFS
[2026-03-05 03:45:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 03:45:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 03:45:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 03:45:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 03:45:15] 2.11.2.0 5882 49479 74352 156912 0 49 17307972 20275200 1 130560 0 13282196 99.932 2964075 30235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-05 03:45:15] CVMFS is ok
[2026-03-05 03:45:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 03:45:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 03:45:15] Further information can be found at the LHC@home message board.
[2026-03-05 03:45:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 03:45:15] Checking for apptainer binary...
[2026-03-05 03:45:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 03:45:15] Running /usr/bin/apptainer --version
[2026-03-05 03:45:15] apptainer version 1.3.2-1.el7
[2026-03-05 03:45:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 03:45:17] c-204-12.aglt2.org
[2026-03-05 03:45:17] apptainer works
[2026-03-05 03:45:17] Set ATHENA_PROC_NUMBER=8
[2026-03-05 03:45:17] Set ATHENA_CORE_NUMBER=8
[2026-03-05 03:45:17] Starting ATLAS job with PandaID=7038568290
[2026-03-05 03:45:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 05:41:58]  *** The last 200 lines of the pilot log: ***
[2026-03-05 05:41:58] 2026-03-05 10:41:07,225 | INFO     | job 7038568290 has finished - writing final server update
[2026-03-05 05:41:58] 2026-03-05 10:41:07,226 | INFO     | total number of processed events: 400 (read)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038568290/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,228 | INFO     | extracted standard info from prmon json
[2026-03-05 05:41:58] 2026-03-05 10:41:07,228 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 05:41:58] 2026-03-05 10:41:07,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 05:41:58] 2026-03-05 10:41:07,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 05:41:58] 2026-03-05 10:41:07,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 05:41:58] 2026-03-05 10:41:07,231 | INFO     | fitting pss+swap vs Time
[2026-03-05 05:41:58] 2026-03-05 10:41:07,232 | INFO     | sum of square deviations: 459366752.5
[2026-03-05 05:41:58] 2026-03-05 10:41:07,233 | INFO     | sum of deviations: -1323386002.5000048
[2026-03-05 05:41:58] 2026-03-05 10:41:07,233 | INFO     | mean x: 1772703813.5
[2026-03-05 05:41:58] 2026-03-05 10:41:07,233 | INFO     | mean y: 2466003.0614035088
[2026-03-05 05:41:58] 2026-03-05 10:41:07,233 | INFO     | intersect: 5109434238.348042
[2026-03-05 05:41:58] 2026-03-05 10:41:07,233 | INFO     | chi2: 2.4974437678557098
[2026-03-05 05:41:58] 2026-03-05 10:41:07,234 | INFO     | sum of square deviations: 401533110.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,234 | INFO     | sum of deviations: 7062203264.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,235 | INFO     | mean x: 1772703661.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,235 | INFO     | mean y: 2487323.788990826
[2026-03-05 05:41:58] 2026-03-05 10:41:07,235 | INFO     | intersect: -31175996514.86369
[2026-03-05 05:41:58] 2026-03-05 10:41:07,235 | INFO     | chi2: 1.5134449939730379
[2026-03-05 05:41:58] 2026-03-05 10:41:07,235 | INFO     | current chi2=1.5134449939730379 (change=39.400237416657724 %)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,236 | INFO     | sum of square deviations: 348769330.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,236 | INFO     | sum of deviations: 6826992723.5
[2026-03-05 05:41:58] 2026-03-05 10:41:07,236 | INFO     | mean x: 1772703508.5
[2026-03-05 05:41:58] 2026-03-05 10:41:07,236 | INFO     | mean y: 2486643.528846154
[2026-03-05 05:41:58] 2026-03-05 10:41:07,237 | INFO     | intersect: -34697336169.022995
[2026-03-05 05:41:58] 2026-03-05 10:41:07,237 | INFO     | chi2: 1.5165268250482573
[2026-03-05 05:41:58] 2026-03-05 10:41:07,237 | INFO     | current chi2=1.5165268250482573 (change=-0.20363020046926952 %)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,237 | INFO     | right removable region: 103
[2026-03-05 05:41:58] 2026-03-05 10:41:07,237 | INFO     | sum of square deviations: 401533110.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,238 | INFO     | sum of deviations: -17216515072.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,238 | INFO     | mean x: 1772703966.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,238 | INFO     | mean y: 2507004.220183486
[2026-03-05 05:41:58] 2026-03-05 10:41:07,238 | INFO     | intersect: 76010646280.28929
[2026-03-05 05:41:58] 2026-03-05 10:41:07,238 | INFO     | chi2: 1.1305254357089491
[2026-03-05 05:41:58] 2026-03-05 10:41:07,239 | INFO     | current chi2=1.1305254357089491 (change=54.73269707771593 %)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,239 | INFO     | sum of square deviations: 348769330.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,239 | INFO     | sum of deviations: -14757955273.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,239 | INFO     | mean x: 1772704118.5
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | mean y: 2499769.7115384615
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | intersect: 75013361800.1713
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | chi2: 1.1186183824471871
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | current chi2=1.1186183824471871 (change=1.0532317881282454 %)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | left removable region: 20
[2026-03-05 05:41:58] 2026-03-05 10:41:07,240 | INFO     | sum of square deviations: 177275882.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,241 | INFO     | sum of deviations: 721434800.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,241 | INFO     | mean x: 1772704088.0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,241 | INFO     | mean y: 2497341.4698795183
[2026-03-05 05:41:58] 2026-03-05 10:41:07,241 | INFO     | intersect: -7211627923.384041
[2026-03-05 05:41:58] 2026-03-05 10:41:07,241 | INFO     | chi2: 0.00022214032893801957
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | current memory leak: 4.07 B/s (using 83 data points, chi2=0.00)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | ..............................
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | . Timing measurements:
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | . get job = 0 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,242 | INFO     | . initial setup = 8 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | . payload setup = 8 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | . stage-in = 0 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | . payload execution = 6899 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | . stage-out = 0 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | . log creation = 0 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,243 | INFO     | ..............................
[2026-03-05 05:41:58] 2026-03-05 10:41:07,484 | INFO     | 
[2026-03-05 05:41:58] 2026-03-05 10:41:07,484 | INFO     | job summary report
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | --------------------------------------------------
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | PanDA job id: 7038568290
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | task id: 48955006
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | errors: (none)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 05:41:58] 2026-03-05 10:41:07,485 | INFO     | pilot state: finished 
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | transexitcode: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | exeerrorcode: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | exeerrordiag: 
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | exitcode: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | exitmsg: OK
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | cpuconsumptiontime: 50992 s
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | nevents: 400
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | neventsw: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,486 | INFO     | pid: 31554
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | pgrp: 31554
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | corecount: 8
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | event service: False
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | sizes: {0: 2295801, 11: 2295801, 6911: 2322982, 6912: 2331980, 6914: 2332230}
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | --------------------------------------------------
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | 
[2026-03-05 05:41:58] 2026-03-05 10:41:07,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 05:41:58] 2026-03-05 10:41:07,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,516 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,516 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,516 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,519 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,519 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 05:41:58] 2026-03-05 10:41:07,520 | INFO     | job 7038568290 has completed (purged errors)
[2026-03-05 05:41:58] 2026-03-05 10:41:07,520 | INFO     | overall cleanup function is called
[2026-03-05 05:41:58] 2026-03-05 10:41:08,528 | INFO     | --- collectZombieJob: --- 10, [31554]
[2026-03-05 05:41:58] 2026-03-05 10:41:08,529 | INFO     | zombie collector waiting for pid 31554
[2026-03-05 05:41:58] 2026-03-05 10:41:08,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 05:41:58] 2026-03-05 10:41:08,529 | INFO     | collected zombie processes
[2026-03-05 05:41:58] 2026-03-05 10:41:08,529 | INFO     | will attempt to kill all subprocesses of pid=31554
[2026-03-05 05:41:58] 2026-03-05 10:41:08,614 | INFO     | process IDs to be killed: [31554] (in reverse order)
[2026-03-05 05:41:58] 2026-03-05 10:41:08,673 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 05:41:58] 2026-03-05 10:41:08,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 05:41:58] 2026-03-05 10:41:08,677 | INFO     | did not find any defunct processes belonging to 31554
[2026-03-05 05:41:58] 2026-03-05 10:41:08,679 | INFO     | did not find any defunct processes belonging to 31554
[2026-03-05 05:41:58] 2026-03-05 10:41:08,680 | INFO     | ready for new job
[2026-03-05 05:41:58] 2026-03-05 10:41:08,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 05:41:58] 2026-03-05 10:41:08,681 | INFO     | **************************************
[2026-03-05 05:41:58] 2026-03-05 10:41:08,681 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 05:41:58] 2026-03-05 10:41:08,681 | INFO     | **************************************
[2026-03-05 05:41:58] 2026-03-05 10:41:08,682 | INFO     | 
[2026-03-05 05:41:58] 2026-03-05 10:41:08,682 | INFO     | architecture information:
[2026-03-05 05:41:58] 2026-03-05 10:41:08,683 | INFO     | executing command: cat /etc/os-release
[2026-03-05 05:41:58] 2026-03-05 10:41:08,700 | INFO     | cat /etc/os-release:
[2026-03-05 05:41:58] NAME="CentOS Linux"
[2026-03-05 05:41:58] VERSION="7 (Core)"
[2026-03-05 05:41:58] ID="centos"
[2026-03-05 05:41:58] ID_LIKE="rhel fedora"
[2026-03-05 05:41:58] VERSION_ID="7"
[2026-03-05 05:41:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 05:41:58] ANSI_COLOR="0;31"
[2026-03-05 05:41:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 05:41:58] HOME_URL="https://www.centos.org/"
[2026-03-05 05:41:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 05:41:58] 
[2026-03-05 05:41:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 05:41:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 05:41:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 05:41:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 05:41:58] 
[2026-03-05 05:41:58] 2026-03-05 10:41:08,701 | INFO     | **************************************
[2026-03-05 05:41:58] 2026-03-05 10:41:09,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 05:41:58] 2026-03-05 10:41:09,223 | INFO     | sufficient remaining disk space (18133024768 B)
[2026-03-05 05:41:58] 2026-03-05 10:41:09,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 05:41:58] 2026-03-05 10:41:09,224 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 05:41:58] 2026-03-05 10:41:09,224 | INFO     | update_server=False
[2026-03-05 05:41:58] 2026-03-05 10:41:09,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 05:41:58] 2026-03-05 10:41:09,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 05:41:58] 2026-03-05 10:41:09,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 05:41:58] 2026-03-05 10:41:09,485 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 05:41:58] 2026-03-05 10:41:09,485 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 05:41:58] 2026-03-05 10:41:09,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 05:41:58] 2026-03-05 10:41:09,486 | INFO     | will abort loop
[2026-03-05 05:41:58] 2026-03-05 10:41:09,723 | INFO     | all data control threads have been joined
[2026-03-05 05:41:58] 2026-03-05 10:41:09,849 | INFO     | all job control threads have been joined
[2026-03-05 05:41:58] 2026-03-05 10:41:10,230 | INFO     | [job] retrieve thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,231 | INFO     | [job] queue monitor thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,307 | INFO     | [payload] failed_post thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,491 | INFO     | [job] job monitor thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,519 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,541 | INFO     | all payload control threads have been joined
[2026-03-05 05:41:58] 2026-03-05 10:41:10,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 05:41:58] 2026-03-05 10:41:10,729 | INFO     | [data] control thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:10,854 | INFO     | [job] control thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,001 | INFO     | [payload] validate_post thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,196 | INFO     | [data] copytool_in thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,340 | INFO     | [job] validate thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,546 | INFO     | [payload] control thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,675 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:11,677 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:12,550 | INFO     | [data] copytool_out thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:13,231 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:19,809 | INFO     | job.realtimelogging is not enabled
[2026-03-05 05:41:58] 2026-03-05 10:41:20,814 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 05:41:58] 2026-03-05 10:41:39,225 | INFO     | PID=27095 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 05:41:58] 2026-03-05 10:41:39,226 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 05:41:58] 2026-03-05 10:41:39,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 05:41:58] 2026-03-05 10:41:39,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 05:41:58] 2026-03-05 10:41:51,998 | INFO     | [monitor] cgroup control has ended
[2026-03-05 05:41:58] 2026-03-05 10:41:52,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757101586240)>', '<ExcThread(monitor, started 139756188972800)>']
[2026-03-05 05:41:58] 2026-03-05 10:41:53,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 05:41:58] 2026-03-05 10:41:53,299 | INFO     | [monitor] control thread has ended
[2026-03-05 05:41:58] 2026-03-05 10:41:57,966 | INFO     | all workflow threads have been joined
[2026-03-05 05:41:58] 2026-03-05 10:41:57,966 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 05:41:58] 2026-03-05 10:41:57,966 | INFO     | traces error code: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:57,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 05:41:58] 2026-03-05 10:41:58,069 [wrapper] ==== pilot stdout END ====
[2026-03-05 05:41:58] 2026-03-05 10:41:58,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 05:41:58] 2026-03-05 10:41:58,077 [wrapper] pilotpid: 27095
[2026-03-05 05:41:58] 2026-03-05 10:41:58,081 [wrapper] Pilot exit status: 0
[2026-03-05 05:41:58] 2026-03-05 10:41:58,099 [wrapper] pandaids: 7038568290
[2026-03-05 05:41:58] 2026-03-05 10:41:58,146 [wrapper] cleanup supervisor_pilot  5870 27096
[2026-03-05 05:41:58] 2026-03-05 10:41:58,151 [wrapper] Test setup, not cleaning
[2026-03-05 05:41:58] 2026-03-05 10:41:58,156 [wrapper] apfmon messages muted
[2026-03-05 05:41:58] 2026-03-05 10:41:58,161 [wrapper] ==== wrapper stdout END ====
[2026-03-05 05:41:58] 2026-03-05 10:41:58,166 [wrapper] ==== wrapper stderr END ====
[2026-03-05 05:41:58]  *** Error codes and diagnostics ***
[2026-03-05 05:41:58]     "exeErrorCode": 0,
[2026-03-05 05:41:58]     "exeErrorDiag": "",
[2026-03-05 05:41:58]     "pilotErrorCode": 0,
[2026-03-05 05:41:58]     "pilotErrorDiag": "",
[2026-03-05 05:41:58]  *** Listing of results directory ***
[2026-03-05 05:41:58] total 612812
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 23:31 pilot3.tar.gz
[2026-03-05 05:41:58] -rwx------ 1 boincer umatlas     36322 Mar  4 23:32 runpilot2-wrapper.sh
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 23:33 queuedata.json
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas       100 Mar  5 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 05:41:58] -rwxr-xr-x 1 boincer umatlas      7986 Mar  5 03:45 run_atlas
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas       105 Mar  5 03:45 job.xml
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas 439448299 Mar  5 03:45 EVNT.46701403._000060.pool.root.1
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 03:45 start_atlas.sh
[2026-03-05 05:41:58] drwxrwx--x 2 boincer umatlas      4096 Mar  5 03:45 shared
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas    597955 Mar  5 03:45 input.tar.gz
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas         0 Mar  5 03:45 boinc_lockfile
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas      2562 Mar  5 03:45 pandaJob.out
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas        57 Mar  5 03:45 setup.sh.local
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas    997727 Mar  5 03:45 agis_schedconf.cvmfs.json
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas   1521291 Mar  5 03:45 agis_ddmendpoints.agis.ALL.json
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas       433 Mar  5 03:45 workernode_map.json
[2026-03-05 05:41:58] drwx------ 5 boincer umatlas      4096 Mar  5 03:45 pilot3
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas      5909 Mar  5 05:36 init_data.xml
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas 181402688 Mar  5 05:40 HITS.48955006._002983.pool.root.1
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas       530 Mar  5 05:40 boinc_task_state.xml
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas      1048 Mar  5 05:41 memory_monitor_summary.json
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas    384209 Mar  5 05:41 log.48955006._002983.job.log.tgz.1
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas      6399 Mar  5 05:41 heartbeat.json
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas        95 Mar  5 05:41 pilot_heartbeat.json
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas      5000 Mar  5 05:41 pilotlog.txt
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas    980838 Mar  5 05:41 log.48955006._002983.job.log.1
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas       357 Mar  5 05:41 output.list
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas       620 Mar  5 05:41 runtime_log
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 05:41 boinc_mmap_file
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas   1382400 Mar  5 05:41 result.tar.gz
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas        27 Mar  5 05:41 wrapper_checkpoint.txt
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas      9341 Mar  5 05:41 runtime_log.err
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas       658 Mar  5 05:41 OR1KDmPZFI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtsMLDmYkIIFm.diag
[2026-03-05 05:41:58] -rw-r--r-- 1 boincer umatlas     20977 Mar  5 05:41 stderr.txt
[2026-03-05 05:41:58] HITS file was successfully produced:
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas 181402688 Mar  5 05:40 shared/HITS.pool.root.1
[2026-03-05 05:41:58]  *** Contents of shared directory: ***
[2026-03-05 05:41:58] total 608260
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas 439448299 Mar  5 03:45 ATLAS.root_0
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas     15845 Mar  5 03:45 start_atlas.sh
[2026-03-05 05:41:58] -rw-r--r-- 2 boincer umatlas    597955 Mar  5 03:45 input.tar.gz
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas 181402688 Mar  5 05:40 HITS.pool.root.1
[2026-03-05 05:41:58] -rw------- 1 boincer umatlas   1382400 Mar  5 05:41 result.tar.gz
05:42:00 (23101): run_atlas exited; CPU time 50942.308366
05:42:00 (23101): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN