Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:34:34 (25975): wrapper (7.7.26015): starting
23:34:34 (25975): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 23:34:34] Arguments: --nthreads 12
[2026-03-04 23:34:34] Threads: 12
[2026-03-04 23:34:34] Checking for CVMFS
[2026-03-04 23:34:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 23:34:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 23:34:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 23:34:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 23:34:34] 2.11.2.0 2979 429782 96400 156903 3 49 14869755 20275200 1 130560 1 182641032 99.957 24103206 17489 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 23:34:34] CVMFS is ok
[2026-03-04 23:34:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 23:34:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 23:34:34] Further information can be found at the LHC@home message board.
[2026-03-04 23:34:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 23:34:34] Checking for apptainer binary...
[2026-03-04 23:34:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 23:34:34] Running /usr/bin/apptainer --version
[2026-03-04 23:34:34] apptainer version 1.3.2-1.el7
[2026-03-04 23:34:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 23:34:36] c-205-21.aglt2.org
[2026-03-04 23:34:36] apptainer works
[2026-03-04 23:34:36] Set ATHENA_PROC_NUMBER=12
[2026-03-04 23:34:36] Set ATHENA_CORE_NUMBER=12
[2026-03-04 23:34:36] Starting ATLAS job with PandaID=7040885080
[2026-03-04 23:34:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 00:33:08]  *** The last 200 lines of the pilot log: ***
[2026-03-05 00:33:08]  direct_access_wan=False
[2026-03-05 00:33:08]  domain=
[2026-03-05 00:33:08]  filesize=360035
[2026-03-05 00:33:08]  filetype=log
[2026-03-05 00:33:08]  guid=36f576ed-b95d-4b80-b778-5bb582e400d4
[2026-03-05 00:33:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 00:33:08]  is_altstaged=None
[2026-03-05 00:33:08]  is_tar=False
[2026-03-05 00:33:08]  lfn=log.48700874._003111.job.log.tgz.1
[2026-03-05 00:33:08]  mtime=0
[2026-03-05 00:33:08]  protocol_id=None
[2026-03-05 00:33:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 00:33:08]  replicas=None
[2026-03-05 00:33:08]  scope=mc23_13p6TeV
[2026-03-05 00:33:08]  status=None
[2026-03-05 00:33:08]  status_code=0
[2026-03-05 00:33:08]  storage_token=
[2026-03-05 00:33:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7040885080/log.48700874._003111.job.log.tgz.1
[2026-03-05 00:33:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/ae/log.48700874._003111.job.log.tgz.1
[2026-03-05 00:33:08]  workdir=None
[2026-03-05 00:33:08] ]
[2026-03-05 00:33:08] 2026-03-05 05:32:02,903 | INFO     | monitor loop #262: job 0:7040885080 is in state 'stageout'
[2026-03-05 00:33:08] 2026-03-05 05:32:02,903 | WARNING  | aborting job monitor tasks since payload process 3295 is not running
[2026-03-05 00:33:08] 2026-03-05 05:32:02,924 | INFO     | transferring file log.48700874._003111.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7040885080/log.48700874._003111.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-05 00:33:08] 2026-03-05 05:32:02,924 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7040885080/log.48700874._003111.job.log.tgz.1 /tmp/boinchome/slots/0/log.48700874._003111.job
[2026-03-05 00:33:08] 2026-03-05 05:32:02,945 | INFO     | adding to output.list: log.48700874._003111.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/ae/log.48700874._003111.job.log.tg
[2026-03-05 00:33:08] 2026-03-05 05:32:02,946 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 00:33:08] 2026-03-05 05:32:02,946 | INFO     | summary of transferred files:
[2026-03-05 00:33:08] 2026-03-05 05:32:02,946 | INFO     |  -- lfn=log.48700874._003111.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 00:33:08] 2026-03-05 05:32:02,947 | INFO     | stage-out finished correctly
[2026-03-05 00:33:08] 2026-03-05 05:32:03,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 00:33:08] 2026-03-05 05:32:04,226 | INFO     | time since job start (3427s) is within the limit (349056.0s)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,023 | INFO     | job 7040885080 has state=finished
[2026-03-05 00:33:08] 2026-03-05 05:32:05,023 | INFO     | preparing for final server update for job 7040885080 in state='finished'
[2026-03-05 00:33:08] 2026-03-05 05:32:05,023 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7040885080/jobReport.json
[2026-03-05 00:33:08] 2026-03-05 05:32:05,027 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-05 00:33:08] 2026-03-05 05:32:05,027 | INFO     | this job has now completed (state=finished)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,027 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,027 | INFO     | log transfer has been attempted: DONE
[2026-03-05 00:33:08] 2026-03-05 05:32:05,028 | INFO     | job 7040885080 has finished - writing final server update
[2026-03-05 00:33:08] 2026-03-05 05:32:05,028 | INFO     | total number of processed events: 400 (read)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,030 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7040885080/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,031 | INFO     | extracted standard info from prmon json
[2026-03-05 00:33:08] 2026-03-05 05:32:05,031 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 00:33:08] 2026-03-05 05:32:05,031 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 00:33:08] 2026-03-05 05:32:05,031 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 00:33:08] 2026-03-05 05:32:05,031 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 00:33:08] 2026-03-05 05:32:05,032 | INFO     | fitting pss+swap vs Time
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | sum of square deviations: 36465800.0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | sum of deviations: -4795866848.0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | mean x: 1772687090.0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | mean y: 2803579.897959184
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | intersect: 233141011073.18182
[2026-03-05 00:33:08] 2026-03-05 05:32:05,033 | INFO     | chi2: 0.039993482131258355
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | current memory leak: -131.52 B/s (using 49 data points, chi2=0.04)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | could have reported an average CPU frequency of 1684 MHz (5 samples)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | ..............................
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | . Timing measurements:
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | . get job = 0 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | . initial setup = 7 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,034 | INFO     | . payload setup = 7 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,035 | INFO     | . stage-in = 0 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,035 | INFO     | . payload execution = 3402 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,035 | INFO     | . stage-out = 0 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,035 | INFO     | . log creation = 0 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,035 | INFO     | ..............................
[2026-03-05 00:33:08] 2026-03-05 05:32:05,112 | INFO     | 
[2026-03-05 00:33:08] 2026-03-05 05:32:05,112 | INFO     | job summary report
[2026-03-05 00:33:08] 2026-03-05 05:32:05,112 | INFO     | --------------------------------------------------
[2026-03-05 00:33:08] 2026-03-05 05:32:05,112 | INFO     | PanDA job id: 7040885080
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | task id: 48700874
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | errors: (none)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | pilot state: finished 
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | transexitcode: 0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,113 | INFO     | exeerrorcode: 0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | exeerrordiag: 
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | exitcode: 0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | exitmsg: OK
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | cpuconsumptiontime: 36913 s
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | nevents: 400
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | neventsw: 0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,114 | INFO     | pid: 3295
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | pgrp: 3295
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | corecount: 12
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | event service: False
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | sizes: {0: 2295350, 1: 2295811, 12: 2295811, 3412: 2321364, 3414: 2330418, 3416: 2330588}
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | --------------------------------------------------
[2026-03-05 00:33:08] 2026-03-05 05:32:05,115 | INFO     | 
[2026-03-05 00:33:08] 2026-03-05 05:32:05,116 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-05 00:33:08] 2026-03-05 05:32:05,140 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,140 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 00:33:08] 2026-03-05 05:32:05,143 | INFO     | job 7040885080 has completed (purged errors)
[2026-03-05 00:33:08] 2026-03-05 05:32:05,144 | INFO     | overall cleanup function is called
[2026-03-05 00:33:08] 2026-03-05 05:32:06,152 | INFO     | --- collectZombieJob: --- 10, [3295]
[2026-03-05 00:33:08] 2026-03-05 05:32:06,152 | INFO     | zombie collector waiting for pid 3295
[2026-03-05 00:33:08] 2026-03-05 05:32:06,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 00:33:08] 2026-03-05 05:32:06,162 | INFO     | collected zombie processes
[2026-03-05 00:33:08] 2026-03-05 05:32:06,162 | INFO     | will attempt to kill all subprocesses of pid=3295
[2026-03-05 00:33:08] 2026-03-05 05:32:06,248 | INFO     | process IDs to be killed: [3295] (in reverse order)
[2026-03-05 00:33:08] 2026-03-05 05:32:06,303 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 00:33:08] 2026-03-05 05:32:06,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 00:33:08] 2026-03-05 05:32:06,307 | INFO     | did not find any defunct processes belonging to 3295
[2026-03-05 00:33:08] 2026-03-05 05:32:06,310 | INFO     | did not find any defunct processes belonging to 3295
[2026-03-05 00:33:08] 2026-03-05 05:32:06,310 | INFO     | ready for new job
[2026-03-05 00:33:08] 2026-03-05 05:32:06,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 00:33:08] 2026-03-05 05:32:06,312 | INFO     | **************************************
[2026-03-05 00:33:08] 2026-03-05 05:32:06,312 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 00:33:08] 2026-03-05 05:32:06,312 | INFO     | **************************************
[2026-03-05 00:33:08] 2026-03-05 05:32:06,312 | INFO     | 
[2026-03-05 00:33:08] 2026-03-05 05:32:06,312 | INFO     | architecture information:
[2026-03-05 00:33:08] 2026-03-05 05:32:06,313 | INFO     | executing command: cat /etc/os-release
[2026-03-05 00:33:08] 2026-03-05 05:32:06,328 | INFO     | cat /etc/os-release:
[2026-03-05 00:33:08] NAME="CentOS Linux"
[2026-03-05 00:33:08] VERSION="7 (Core)"
[2026-03-05 00:33:08] ID="centos"
[2026-03-05 00:33:08] ID_LIKE="rhel fedora"
[2026-03-05 00:33:08] VERSION_ID="7"
[2026-03-05 00:33:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 00:33:08] ANSI_COLOR="0;31"
[2026-03-05 00:33:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 00:33:08] HOME_URL="https://www.centos.org/"
[2026-03-05 00:33:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 00:33:08] 
[2026-03-05 00:33:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 00:33:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 00:33:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 00:33:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 00:33:08] 
[2026-03-05 00:33:08] 2026-03-05 05:32:06,328 | INFO     | **************************************
[2026-03-05 00:33:08] 2026-03-05 05:32:06,831 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-05 00:33:08] 2026-03-05 05:32:06,848 | INFO     | sufficient remaining disk space (29444014080 B)
[2026-03-05 00:33:08] 2026-03-05 05:32:06,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 00:33:08] 2026-03-05 05:32:06,848 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 00:33:08] 2026-03-05 05:32:06,848 | INFO     | update_server=False
[2026-03-05 00:33:08] 2026-03-05 05:32:06,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 00:33:08] 2026-03-05 05:32:06,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 00:33:08] 2026-03-05 05:32:06,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 00:33:08] 2026-03-05 05:32:06,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 00:33:08] 2026-03-05 05:32:06,850 | INFO     | aborting loop
[2026-03-05 00:33:08] 2026-03-05 05:32:07,162 | INFO     | all data control threads have been joined
[2026-03-05 00:33:08] 2026-03-05 05:32:07,475 | INFO     | all payload control threads have been joined
[2026-03-05 00:33:08] 2026-03-05 05:32:07,854 | INFO     | [job] retrieve thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:07,855 | INFO     | [job] queue monitor thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:07,855 | INFO     | [job] job monitor thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:07,972 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,167 | INFO     | [payload] failed_post thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,168 | INFO     | [data] control thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,206 | INFO     | all job control threads have been joined
[2026-03-05 00:33:08] 2026-03-05 05:32:08,476 | INFO     | [payload] control thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,532 | INFO     | [job] validate thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,625 | INFO     | [payload] validate_post thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,803 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,811 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:08,854 | INFO     | [data] copytool_out thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:09,095 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:09,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 00:33:08] 2026-03-05 05:32:09,212 | INFO     | [job] control thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:09,329 | INFO     | [data] copytool_in thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:13,122 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 00:33:08] 2026-03-05 05:32:37,410 | INFO     | PID=29962 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 00:33:08] 2026-03-05 05:32:37,411 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 00:33:08] 2026-03-05 05:32:37,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 00:33:08] 2026-03-05 05:32:37,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 00:33:08] 2026-03-05 05:33:02,024 | INFO     | [monitor] cgroup control has ended
[2026-03-05 00:33:08] 2026-03-05 05:33:03,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138729805632)>', '<ExcThread(monitor, started 140138424276736)>']
[2026-03-05 00:33:08] 2026-03-05 05:33:03,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 00:33:08] 2026-03-05 05:33:03,534 | INFO     | [monitor] control thread has ended
[2026-03-05 00:33:08] 2026-03-05 05:33:08,144 | INFO     | all workflow threads have been joined
[2026-03-05 00:33:08] 2026-03-05 05:33:08,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 00:33:08] 2026-03-05 05:33:08,145 | INFO     | traces error code: 0
[2026-03-05 00:33:08] 2026-03-05 05:33:08,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 00:33:08] 2026-03-05 05:33:08,240 [wrapper] ==== pilot stdout END ====
[2026-03-05 00:33:08] 2026-03-05 05:33:08,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 00:33:08] 2026-03-05 05:33:08,248 [wrapper] pilotpid: 29962
[2026-03-05 00:33:08] 2026-03-05 05:33:08,252 [wrapper] Pilot exit status: 0
[2026-03-05 00:33:08] 2026-03-05 05:33:08,268 [wrapper] pandaids: 7040885080
[2026-03-05 00:33:08] 2026-03-05 05:33:08,314 [wrapper] cleanup supervisor_pilot 16785 29963
[2026-03-05 00:33:08] 2026-03-05 05:33:08,317 [wrapper] Test setup, not cleaning
[2026-03-05 00:33:08] 2026-03-05 05:33:08,321 [wrapper] apfmon messages muted
[2026-03-05 00:33:08] 2026-03-05 05:33:08,324 [wrapper] ==== wrapper stdout END ====
[2026-03-05 00:33:08] 2026-03-05 05:33:08,328 [wrapper] ==== wrapper stderr END ====
[2026-03-05 00:33:08]  *** Error codes and diagnostics ***
[2026-03-05 00:33:08]     "exeErrorCode": 0,
[2026-03-05 00:33:08]     "exeErrorDiag": "",
[2026-03-05 00:33:08]     "pilotErrorCode": 0,
[2026-03-05 00:33:08]     "pilotErrorDiag": "",
[2026-03-05 00:33:08]  *** Listing of results directory ***
[2026-03-05 00:33:08] total 332516
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 17:50 pilot3.tar.gz
[2026-03-05 00:33:08] -rwx------ 1 boincer umatlas     36322 Mar  4 18:34 runpilot2-wrapper.sh
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 18:35 queuedata.json
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas       100 Mar  4 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 00:33:08] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 23:34 run_atlas
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas       105 Mar  4 23:34 job.xml
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas 189711547 Mar  4 23:34 EVNT.48700872._000121.pool.root.1
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 23:34 start_atlas.sh
[2026-03-05 00:33:08] drwxrwx--x 2 boincer umatlas      4096 Mar  4 23:34 shared
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas    597961 Mar  4 23:34 input.tar.gz
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas         0 Mar  4 23:34 boinc_lockfile
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas      2551 Mar  4 23:34 pandaJob.out
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas        57 Mar  4 23:34 setup.sh.local
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas    997749 Mar  4 23:34 agis_schedconf.cvmfs.json
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas   1521291 Mar  4 23:34 agis_ddmendpoints.agis.ALL.json
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas       434 Mar  4 23:34 workernode_map.json
[2026-03-05 00:33:08] drwx------ 5 boincer umatlas      4096 Mar  4 23:34 pilot3
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas 145103878 Mar  5 00:31 HITS.48700874._003111.pool.root.1
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas       529 Mar  5 00:31 boinc_task_state.xml
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas      5953 Mar  5 00:31 init_data.xml
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas      1043 Mar  5 00:31 memory_monitor_summary.json
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas    360035 Mar  5 00:32 log.48700874._003111.job.log.tgz.1
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas      6407 Mar  5 00:32 heartbeat.json
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas      8192 Mar  5 00:32 boinc_mmap_file
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas        27 Mar  5 00:32 wrapper_checkpoint.txt
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas        95 Mar  5 00:32 pilot_heartbeat.json
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas      4742 Mar  5 00:33 pilotlog.txt
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas    509954 Mar  5 00:33 log.48700874._003111.job.log.1
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas       357 Mar  5 00:33 output.list
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas       620 Mar  5 00:33 runtime_log
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas    890880 Mar  5 00:33 result.tar.gz
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas       659 Mar  5 00:33 aVVNDmbuAI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrEKLDmurxk3n.diag
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas      9343 Mar  5 00:33 runtime_log.err
[2026-03-05 00:33:08] -rw-r--r-- 1 boincer umatlas     21025 Mar  5 00:33 stderr.txt
[2026-03-05 00:33:08] HITS file was successfully produced:
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas 145103878 Mar  5 00:31 shared/HITS.pool.root.1
[2026-03-05 00:33:08]  *** Contents of shared directory: ***
[2026-03-05 00:33:08] total 328448
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas 189711547 Mar  4 23:34 ATLAS.root_0
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 23:34 start_atlas.sh
[2026-03-05 00:33:08] -rw-r--r-- 2 boincer umatlas    597961 Mar  4 23:34 input.tar.gz
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas 145103878 Mar  5 00:31 HITS.pool.root.1
[2026-03-05 00:33:08] -rw------- 1 boincer umatlas    890880 Mar  5 00:33 result.tar.gz
00:33:09 (25975): run_atlas exited; CPU time 36895.542947
00:33:09 (25975): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN