Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:18:01 (2309969): wrapper (7.7.26015): starting
15:18:01 (2309969): wrapper: running run_atlas (--nthreads 3)
[2026-03-05 15:18:01] Arguments: --nthreads 3
[2026-03-05 15:18:01] Threads: 3
[2026-03-05 15:18:01] Checking for CVMFS
[2026-03-05 15:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 15:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 15:18:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 15:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 15:18:02] 2.9.2.0 964071 11468 72240 156922 2 49 26331388 36864000 0 130560 0 3695796 99.978 433891 14609 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-05 15:18:02] CVMFS is ok
[2026-03-05 15:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 15:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 15:18:02] Further information can be found at the LHC@home message board.
[2026-03-05 15:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 15:18:02] Checking for apptainer binary...
[2026-03-05 15:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 15:18:02] Running /usr/bin/apptainer --version
[2026-03-05 15:18:02] apptainer version 1.3.6-6.1
[2026-03-05 15:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 15:18:02] atlasA226
[2026-03-05 15:18:02] apptainer works
[2026-03-05 15:18:02] Set ATHENA_PROC_NUMBER=3
[2026-03-05 15:18:02] Set ATHENA_CORE_NUMBER=3
[2026-03-05 15:18:02] Starting ATLAS job with PandaID=7038528541
[2026-03-05 15:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 16:41:26]  *** The last 200 lines of the pilot log: ***
[2026-03-05 16:41:26]  filetype=log
[2026-03-05 16:41:26]  guid=7a4b7eea-195a-4eca-af31-d60aee145a65
[2026-03-05 16:41:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 16:41:26]  is_altstaged=None
[2026-03-05 16:41:26]  is_tar=False
[2026-03-05 16:41:26]  lfn=log.48955015._002662.job.log.tgz.1
[2026-03-05 16:41:26]  mtime=0
[2026-03-05 16:41:26]  protocol_id=None
[2026-03-05 16:41:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 16:41:26]  replicas=None
[2026-03-05 16:41:26]  scope=mc23_13p6TeV
[2026-03-05 16:41:26]  status=None
[2026-03-05 16:41:26]  status_code=0
[2026-03-05 16:41:26]  storage_token=
[2026-03-05 16:41:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7038528541/log.48955015._002662.job.log.tgz.1
[2026-03-05 16:41:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/38/log.48955015._002662.job.log.tgz.1
[2026-03-05 16:41:26]  workdir=None
[2026-03-05 16:41:26] ]
[2026-03-05 16:41:26] 2026-03-05 15:40:21,487 | INFO     | transferring file log.48955015._002662.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7038528541/log.48955015._002662.job.log.tgz.1 to /local/data/boinc/
[2026-03-05 16:41:26] 2026-03-05 15:40:21,487 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7038528541/log.48955015._002662.job.log.tgz.1 /local/data/boinc/slots/0/log.48955015._0026
[2026-03-05 16:41:26] 2026-03-05 15:40:21,500 | INFO     | adding to output.list: log.48955015._002662.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/38/log.48955015._002662.job.log.tg
[2026-03-05 16:41:26] 2026-03-05 15:40:21,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 16:41:26] 2026-03-05 15:40:21,500 | INFO     | summary of transferred files:
[2026-03-05 16:41:26] 2026-03-05 15:40:21,500 | INFO     |  -- lfn=log.48955015._002662.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 16:41:26] 2026-03-05 15:40:21,500 | INFO     | stage-out finished correctly
[2026-03-05 16:41:26] 2026-03-05 15:40:21,784 | WARNING  | process 2318503 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 16:41:26] 2026-03-05 15:40:21,784 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7038528541/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 16:41:26] 2026-03-05 15:40:21,822 | INFO     | number of running child processes to parent process 2318503: 1
[2026-03-05 16:41:26] 2026-03-05 15:40:21,822 | INFO     | maximum number of monitored processes: 6
[2026-03-05 16:41:26] 2026-03-05 15:40:23,040 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 16:41:26] 2026-03-05 15:40:23,276 | INFO     | time since job start (4928s) is within the limit (349056.0s)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,609 | INFO     | job 7038528541 has state=finished
[2026-03-05 16:41:26] 2026-03-05 15:40:23,609 | INFO     | preparing for final server update for job 7038528541 in state='finished'
[2026-03-05 16:41:26] 2026-03-05 15:40:23,609 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7038528541/jobReport.json
[2026-03-05 16:41:26] 2026-03-05 15:40:23,613 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-05 16:41:26] 2026-03-05 15:40:23,614 | INFO     | this job has now completed (state=finished)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,614 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,614 | INFO     | log transfer has been attempted: DONE
[2026-03-05 16:41:26] 2026-03-05 15:40:23,614 | INFO     | job 7038528541 has finished - writing final server update
[2026-03-05 16:41:26] 2026-03-05 15:40:23,614 | INFO     | total number of processed events: 400 (read)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,615 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7038528541/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | INFO     | extracted standard info from prmon json
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | INFO     | fitting pss+swap vs Time
[2026-03-05 16:41:26] 2026-03-05 15:40:23,616 | INFO     | sum of square deviations: 125630262.5
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | sum of deviations: -12452870010.0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | mean x: 1772722846.5
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | mean y: 2495792.810810811
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | intersect: 175720405888.09286
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | chi2: 0.043866518659604836
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | current memory leak: -99.12 B/s (using 74 data points, chi2=0.04)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | could have reported an average CPU frequency of 4300 MHz (6 samples)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | ..............................
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . Timing measurements:
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . get job = 0 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . initial setup = 5 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . payload setup = 6 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . stage-in = 0 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . payload execution = 4905 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . stage-out = 0 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | . log creation = 0 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,617 | INFO     | ..............................
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | 
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | job summary report
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | --------------------------------------------------
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | PanDA job id: 7038528541
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | task id: 48955015
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | errors: (none)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | pilot state: finished 
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | transexitcode: 0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | exeerrorcode: 0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | exeerrordiag: 
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | exitcode: 0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,644 | INFO     | exitmsg: OK
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | cpuconsumptiontime: 14027 s
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | nevents: 400
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | neventsw: 0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | pid: 2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | pgrp: 2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | corecount: 3
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | event service: False
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | sizes: {0: 2295810, 11: 2295810, 4915: 2322181, 4916: 2331185, 4917: 2331241, 4918: 2331435}
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | --------------------------------------------------
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | 
[2026-03-05 16:41:26] 2026-03-05 15:40:23,645 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | job 7038528541 has completed (purged errors)
[2026-03-05 16:41:26] 2026-03-05 15:40:23,660 | INFO     | overall cleanup function is called
[2026-03-05 16:41:26] 2026-03-05 15:40:24,666 | INFO     | --- collectZombieJob: --- 10, [2318503]
[2026-03-05 16:41:26] 2026-03-05 15:40:24,666 | INFO     | zombie collector waiting for pid 2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:24,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 16:41:26] 2026-03-05 15:40:24,667 | INFO     | collected zombie processes
[2026-03-05 16:41:26] 2026-03-05 15:40:24,667 | INFO     | will attempt to kill all subprocesses of pid=2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:24,712 | INFO     | process IDs to be killed: [2318503] (in reverse order)
[2026-03-05 16:41:26] 2026-03-05 15:40:24,740 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 16:41:26] 2026-03-05 15:40:24,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 16:41:26] 2026-03-05 15:40:24,741 | INFO     | did not find any defunct processes belonging to 2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:24,742 | INFO     | did not find any defunct processes belonging to 2318503
[2026-03-05 16:41:26] 2026-03-05 15:40:24,742 | INFO     | ready for new job
[2026-03-05 16:41:26] 2026-03-05 15:40:24,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 16:41:26] 2026-03-05 15:40:25,067 | INFO     | **************************************
[2026-03-05 16:41:26] 2026-03-05 15:40:25,068 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 16:41:26] 2026-03-05 15:40:25,068 | INFO     | **************************************
[2026-03-05 16:41:26] 2026-03-05 15:40:25,068 | INFO     | 
[2026-03-05 16:41:26] 2026-03-05 15:40:25,070 | INFO     | architecture information:
[2026-03-05 16:41:26] 2026-03-05 15:40:25,070 | INFO     | executing command: cat /etc/os-release
[2026-03-05 16:41:26] 2026-03-05 15:40:25,105 | INFO     | cat /etc/os-release:
[2026-03-05 16:41:26] NAME="CentOS Linux"
[2026-03-05 16:41:26] VERSION="7 (Core)"
[2026-03-05 16:41:26] ID="centos"
[2026-03-05 16:41:26] ID_LIKE="rhel fedora"
[2026-03-05 16:41:26] VERSION_ID="7"
[2026-03-05 16:41:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 16:41:26] ANSI_COLOR="0;31"
[2026-03-05 16:41:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 16:41:26] HOME_URL="https://www.centos.org/"
[2026-03-05 16:41:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 16:41:26] 
[2026-03-05 16:41:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 16:41:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 16:41:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 16:41:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 16:41:26] 
[2026-03-05 16:41:26] 2026-03-05 15:40:25,106 | INFO     | **************************************
[2026-03-05 16:41:26] 2026-03-05 15:40:25,609 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | INFO     | sufficient remaining disk space (327575142400 B)
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | INFO     | update_server=False
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:41:26] 2026-03-05 15:40:25,623 | INFO     | aborting loop
[2026-03-05 16:41:26] 2026-03-05 15:40:26,583 | INFO     | all data control threads have been joined
[2026-03-05 16:41:26] 2026-03-05 15:40:26,629 | INFO     | [job] queue monitor thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:26,630 | INFO     | [job] job monitor thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:26,630 | INFO     | [job] retrieve thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:26,789 | INFO     | all payload control threads have been joined
[2026-03-05 16:41:26] 2026-03-05 15:40:27,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 16:41:26] 2026-03-05 15:40:27,092 | INFO     | all job control threads have been joined
[2026-03-05 16:41:26] 2026-03-05 15:40:27,281 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,349 | INFO     | [job] validate thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,525 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,560 | INFO     | [data] copytool_in thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,589 | INFO     | [data] control thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,610 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:27,795 | INFO     | [payload] control thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:28,038 | INFO     | [payload] validate_post thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:28,098 | INFO     | [job] control thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:28,157 | INFO     | [payload] failed_post thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:29,046 | INFO     | [data] copytool_out thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:29,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 16:41:26] 2026-03-05 15:40:33,084 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:36,500 | INFO     | job.realtimelogging is not enabled
[2026-03-05 16:41:26] 2026-03-05 15:40:37,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 16:41:26] 2026-03-05 15:40:56,404 | INFO     | PID=2314077 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 16:41:26] 2026-03-05 15:40:56,404 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 16:41:26] 2026-03-05 15:40:56,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 16:41:26] 2026-03-05 15:40:56,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 16:41:26] 2026-03-05 15:41:21,336 | INFO     | [monitor] cgroup control has ended
[2026-03-05 16:41:26] 2026-03-05 15:41:21,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479154411328)>', '<ExcThread(monitor, started 140477911267072)>']
[2026-03-05 16:41:26] 2026-03-05 15:41:22,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 16:41:26] 2026-03-05 15:41:22,544 | INFO     | [monitor] control thread has ended
[2026-03-05 16:41:26] 2026-03-05 15:41:26,833 | INFO     | all workflow threads have been joined
[2026-03-05 16:41:26] 2026-03-05 15:41:26,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 16:41:26] 2026-03-05 15:41:26,834 | INFO     | traces error code: 0
[2026-03-05 16:41:26] 2026-03-05 15:41:26,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 16:41:26] 2026-03-05 15:41:26,883 [wrapper] ==== pilot stdout END ====
[2026-03-05 16:41:26] 2026-03-05 15:41:26,886 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 16:41:26] 2026-03-05 15:41:26,889 [wrapper] pilotpid: 2314077
[2026-03-05 16:41:26] 2026-03-05 15:41:26,892 [wrapper] Pilot exit status: 0
[2026-03-05 16:41:26] 2026-03-05 15:41:26,899 [wrapper] pandaids: 7038528541
[2026-03-05 16:41:26] 2026-03-05 15:41:26,918 [wrapper] cleanup supervisor_pilot 2323714 2314078
[2026-03-05 16:41:26] 2026-03-05 15:41:26,921 [wrapper] Test setup, not cleaning
[2026-03-05 16:41:26] 2026-03-05 15:41:26,924 [wrapper] apfmon messages muted
[2026-03-05 16:41:26] 2026-03-05 15:41:26,927 [wrapper] ==== wrapper stdout END ====
[2026-03-05 16:41:26] 2026-03-05 15:41:26,929 [wrapper] ==== wrapper stderr END ====
[2026-03-05 16:41:26]  *** Error codes and diagnostics ***
[2026-03-05 16:41:26]     "exeErrorCode": 0,
[2026-03-05 16:41:26]     "exeErrorDiag": "",
[2026-03-05 16:41:26]     "pilotErrorCode": 0,
[2026-03-05 16:41:26]     "pilotErrorDiag": "",
[2026-03-05 16:41:26]  *** Listing of results directory ***
[2026-03-05 16:41:26] total 608564
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc    584627 Mar  4 23:50 pilot3.tar.gz
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc      5111 Mar  5 00:31 queuedata.json
[2026-03-05 16:41:26] -rwx------ 1 boinc boinc     36322 Mar  5 00:31 runpilot2-wrapper.sh
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc       100 Mar  5 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 16:41:26] -rwxr-xr-x 1 boinc boinc      7986 Mar  5 15:18 run_atlas
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc       105 Mar  5 15:18 job.xml
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc 434759518 Mar  5 15:18 EVNT.46701403._002098.pool.root.1
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc      6680 Mar  5 15:18 init_data.xml
[2026-03-05 16:41:26] drwxrwx--x 2 boinc boinc      4096 Mar  5 15:18 shared
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc    597961 Mar  5 15:18 input.tar.gz
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc     15845 Mar  5 15:18 start_atlas.sh
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc         0 Mar  5 15:18 boinc_lockfile
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc      2569 Mar  5 15:18 pandaJob.out
[2026-03-05 16:41:26] -rw------- 1 boinc boinc    998460 Mar  5 15:18 agis_schedconf.cvmfs.json
[2026-03-05 16:41:26] -rw------- 1 boinc boinc   1521291 Mar  5 15:18 agis_ddmendpoints.agis.ALL.json
[2026-03-05 16:41:26] -rw------- 1 boinc boinc       429 Mar  5 15:18 workernode_map.json
[2026-03-05 16:41:26] drwx------ 5 boinc boinc      4096 Mar  5 15:18 pilot3
[2026-03-05 16:41:26] -rw------- 1 boinc boinc 182520757 Mar  5 16:40 HITS.48955015._002662.pool.root.1
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc       530 Mar  5 16:40 boinc_task_state.xml
[2026-03-05 16:41:26] -rw------- 1 boinc boinc      1014 Mar  5 16:40 memory_monitor_summary.json
[2026-03-05 16:41:26] -rw------- 1 boinc boinc    249961 Mar  5 16:40 log.48955015._002662.job.log.tgz.1
[2026-03-05 16:41:26] -rw------- 1 boinc boinc      6316 Mar  5 16:40 heartbeat.json
[2026-03-05 16:41:26] -rw------- 1 boinc boinc        95 Mar  5 16:40 pilot_heartbeat.json
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc        27 Mar  5 16:41 wrapper_checkpoint.txt
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc      8192 Mar  5 16:41 boinc_mmap_file
[2026-03-05 16:41:26] -rw------- 1 boinc boinc      4820 Mar  5 16:41 pilotlog.txt
[2026-03-05 16:41:26] -rw------- 1 boinc boinc    722407 Mar  5 16:41 log.48955015._002662.job.log.1
[2026-03-05 16:41:26] -rw------- 1 boinc boinc       357 Mar  5 16:41 output.list
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc       620 Mar  5 16:41 runtime_log
[2026-03-05 16:41:26] -rw------- 1 boinc boinc    993280 Mar  5 16:41 result.tar.gz
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc      8911 Mar  5 16:41 runtime_log.err
[2026-03-05 16:41:26] -rw------- 1 boinc boinc       660 Mar  5 16:41 3HKKDm0rAI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkBKLDmH6ItHm.diag
[2026-03-05 16:41:26] -rw-r--r-- 1 boinc boinc     21310 Mar  5 16:41 stderr.txt
[2026-03-05 16:41:26] HITS file was successfully produced:
[2026-03-05 16:41:26] -rw------- 1 boinc boinc 182520757 Mar  5 16:40 shared/HITS.pool.root.1
[2026-03-05 16:41:26]  *** Contents of shared directory: ***
[2026-03-05 16:41:26] total 604396
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc 434759518 Mar  5 15:18 ATLAS.root_0
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc    597961 Mar  5 15:18 input.tar.gz
[2026-03-05 16:41:26] -rw-r--r-- 2 boinc boinc     15845 Mar  5 15:18 start_atlas.sh
[2026-03-05 16:41:26] -rw------- 1 boinc boinc 182520757 Mar  5 16:40 HITS.pool.root.1
[2026-03-05 16:41:26] -rw------- 1 boinc boinc    993280 Mar  5 16:41 result.tar.gz
16:41:28 (2309969): run_atlas exited; CPU time 14057.063194
16:41:28 (2309969): called boinc_finish(0)

</stderr_txt>
]]>

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