Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 10:49:56 (24240): vboxwrapper version 26210
2026-03-05 10:49:56 (24240): BOINC client version: 8.2.4
2026-03-05 10:49:57 (24240): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-05 10:49:57 (24240): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 10:49:57 (24240): Create VM. (boinc_adbb35e0207d7a14, slot#0)
2026-03-05 10:49:58 (24240): Setting Memory Size for VM. (4300MB)
2026-03-05 10:49:58 (24240): Setting CPU Count for VM. (3)
2026-03-05 10:49:58 (24240): Setting Chipset Options for VM.
2026-03-05 10:49:59 (24240): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 10:49:59 (24240): Setting Boot Options for VM.
2026-03-05 10:50:00 (24240): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 10:50:00 (24240): Enabling VM Network Access.
2026-03-05 10:50:00 (24240): Disabling USB Support for VM.
2026-03-05 10:50:01 (24240): Disabling COM Port Support for VM.
2026-03-05 10:50:01 (24240): Disabling LPT Port Support for VM.
2026-03-05 10:50:01 (24240): Disabling Audio Support for VM.
2026-03-05 10:50:01 (24240): Disabling Clipboard Support for VM.
2026-03-05 10:50:02 (24240): Disabling Drag and Drop Support for VM.
2026-03-05 10:50:02 (24240): Adding storage controller(s) to VM.
2026-03-05 10:50:02 (24240): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 10:50:04 (24240): Adding VirtualBox Guest Additions to VM.
2026-03-05 10:50:05 (24240): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 10:50:05 (24240): forwarding host port 63031 to guest port 80
2026-03-05 10:50:05 (24240): Enabling remote desktop for VM.
2026-03-05 10:50:05 (24240): Required extension pack not installed, remote desktop not enabled.
2026-03-05 10:50:05 (24240): Enabling shared directory for VM.
2026-03-05 10:50:06 (24240): Starting VM using VBoxManage interface. (boinc_adbb35e0207d7a14, slot#0)
2026-03-05 10:50:11 (24240): Successfully started VM. (PID = '5660')
2026-03-05 10:50:11 (24240): Reporting VM Process ID to BOINC.
2026-03-05 10:50:11 (24240): Guest Log: BIOS: VirtualBox 7.1.12
2026-03-05 10:50:11 (24240): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 10:50:11 (24240): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 10:50:11 (24240): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 10:50:11 (24240): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 10:50:11 (24240): Detected: Web Application Enabled (http://localhost:63031)
2026-03-05 10:50:11 (24240): Preference change detected
2026-03-05 10:50:11 (24240): Setting CPU throttle for VM. (100%)
2026-03-05 10:50:11 (24240): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 10:50:13 (24240): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 10:50:13 (24240): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 10:50:16 (24240): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 10:50:16 (24240): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 10:50:16 (24240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 10:51:22 (24240): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 10:51:22 (24240): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 10:51:29 (24240): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000089 main     Log opened 2026-03-05T10:51:27.287065000Z
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000175 main     OS Product: Linux
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000205 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000252 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000253 main     Process ID: 1298
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000253 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 10:51:29 (24240): Guest Log: 00:00:00.000917 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 10:51:29 (24240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 10:51:29 (24240): Guest Log: [INFO] Mounting shared directory
2026-03-05 10:51:29 (24240): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 10:51:31 (24240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 10:51:31 (24240): Guest Log: [INFO] Detected branch: prod
2026-03-05 10:51:32 (24240): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 10:51:32 (24240): Guest Log: Copying input files
2026-03-05 10:51:34 (24240): Guest Log: Copied input files into RunAtlas.
2026-03-05 10:51:34 (24240): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-05 10:51:34 (24240): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-05 10:51:34 (24240): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-05 10:51:34 (24240): Guest Log: Further information can be found at the LHC@home message board.
2026-03-05 10:51:45 (24240): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 10:51:45 (24240): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 10:51:45 (24240): Guest Log: 2.6.3.0 1572 0 32204 156916 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-05 10:51:48 (24240): Guest Log: copied the webapp to /var/www
2026-03-05 10:51:48 (24240): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-05 10:51:48 (24240): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-05 10:51:48 (24240): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 10:51:48 (24240): Guest Log:  *** Starting ATLAS job. (PandaID=7038559827 taskID=48955006) ***
2026-03-05 11:50:33 (24240): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 12:46:53 (24240): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 12:47:03 (24240): Guest Log: 00:59:12.735586 timesync vgsvcTimeSyncWorker: Radical host time change: 3 382 846 000 000ns (HostNow=1 772 714 763 772 000 000 ns HostLast=1 772 711 380 926 000 000 ns)
2026-03-05 12:47:13 (24240): Guest Log: 00:59:22.739091 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 333 844 757 000ns (GuestNow=1 772 714 773 821 293 000 ns GuestLast=1 772 711 439 976 536 000 ns fSetTimeLastLoop=true )
2026-03-05 13:26:34 (24240): Status Report: Elapsed Time: '6000.000000'
2026-03-05 13:26:34 (24240): Status Report: CPU Time: '16756.953125'
2026-03-05 13:47:07 (24240): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 14:31:37 (24240): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 14:31:41 (24240): Guest Log: 01:59:23.740939 timesync vgsvcTimeSyncWorker: Radical host time change: 2 672 175 000 000ns (HostNow=1 772 721 083 359 000 000 ns HostLast=1 772 718 411 184 000 000 ns)
2026-03-05 14:31:51 (24240): Guest Log: 01:59:33.742623 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 718 537 626 000ns (GuestNow=1 772 721 093 360 728 000 ns GuestLast=1 772 718 374 823 102 000 ns fSetTimeLastLoop=true )
2026-03-05 14:51:19 (24240): Guest Log:  *** Job finished ***
2026-03-05 14:51:19 (24240): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:50:41,666 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:50:41,666 | INFO     | traces error code: 0
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:50:41,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,022 | INFO     | PID=5957 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | INFO     | found 0 job(s) in 20 queues
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | CRITICAL | thread 'MainThread' is not alive
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,023 | INFO     | [monitor] control thread has ended
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,650 [wrapper] ==== pilot stdout END ====
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,653 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,655 [wrapper] pilotpid: 5957
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,657 [wrapper] Pilot exit status: 0
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,723 [wrapper] pandaids: 7038559827
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,739 [wrapper] cleanup supervisor_pilot 26440 5958
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,741 [wrapper] Test setup, not cleaning
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,744 [wrapper] apfmon messages muted
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,746 [wrapper] ==== wrapper stdout END ====
2026-03-05 14:51:19 (24240): Guest Log: 2026-03-05 14:51:00,748 [wrapper] ==== wrapper stderr END ====
2026-03-05 14:51:19 (24240): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 14:51:19 (24240): Guest Log:     "exeErrorCode": 0,
2026-03-05 14:51:19 (24240): Guest Log:     "exeErrorDiag": "",
2026-03-05 14:51:19 (24240): Guest Log:     "pilotErrorCode": 0,
2026-03-05 14:51:19 (24240): Guest Log:     "pilotErrorDiag": "",
2026-03-05 14:51:19 (24240): Guest Log:  *** Listing of results directory ***
2026-03-05 14:51:19 (24240): Guest Log: total 188724
2026-03-05 14:51:19 (24240): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 03:43 pilot3.tar.gz
2026-03-05 14:51:19 (24240): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 03:44 queuedata.json
2026-03-05 14:51:19 (24240): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 03:44 runpilot2-wrapper.sh
2026-03-05 14:51:19 (24240): Guest Log: -rwxr-xr-x. 1 atlas atlas      8736 Mar  5 10:51 init_data.xml
2026-03-05 14:51:19 (24240): Guest Log: -rwxr-xr-x. 1 atlas atlas    597951 Mar  5 10:51 input.tar.gz
2026-03-05 14:51:19 (24240): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 10:51 start_atlas.sh
2026-03-05 14:51:19 (24240): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 10:51 EVNT.46701403._000039.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 14:51:19 (24240): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  5 10:51 pandaJob.out
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas    998505 Mar  5 10:52 agis_schedconf.cvmfs.json
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas       401 Mar  5 10:52 workernode_map.json
2026-03-05 14:51:19 (24240): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 10:52 pilot3
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas 186371857 Mar  5 14:49 HITS.48955006._001946.pool.root.1
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas      1023 Mar  5 14:50 memory_monitor_summary.json
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 14:50 agis_ddmendpoints.agis.ALL.json
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas    336712 Mar  5 14:50 log.48955006._001946.job.log.tgz.1
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas      6278 Mar  5 14:50 heartbeat.json
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas        97 Mar  5 14:51 pilot_heartbeat.json
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas       814 Mar  5 14:51 pilotlog.txt
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas   1173574 Mar  5 14:51 log.48955006._001946.job.log.1
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 14:51 output.list
2026-03-05 14:51:19 (24240): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 14:51 runtime_log
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas   1525760 Mar  5 14:51 result.tar.gz
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas       668 Mar  5 14:51 sdrLDmYoEI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1iMLDmDPH48m.diag
2026-03-05 14:51:19 (24240): Guest Log: -rw-r--r--. 1 atlas atlas      8781 Mar  5 14:51 runtime_log.err
2026-03-05 14:51:19 (24240): Guest Log: Looking for outputfile HITS.48955006._001946.pool.root.1
2026-03-05 14:51:19 (24240): Guest Log: HITS file was successfully produced
2026-03-05 14:51:19 (24240): Guest Log: -rw-------. 1 atlas atlas 186371857 Mar  5 14:49 /home/atlas/RunAtlas/HITS.48955006._001946.pool.root.1
2026-03-05 14:51:20 (24240): Guest Log: Successfully finished the ATLAS job!
2026-03-05 14:51:20 (24240): Guest Log: Copying the results back to the shared directory!
2026-03-05 14:51:20 (24240): Guest Log:  *** Contents of shared directory: ***
2026-03-05 14:51:20 (24240): Guest Log: total 613108
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root 439294225 Mar  5 10:49 ATLAS.root_0
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root 186371857 Mar  5  2026 HITS.pool.root.1
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root      8736 Mar  5 10:49 init_data.xml
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root    597951 Mar  5 07:32 input.tar.gz
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root   1525760 Mar  5  2026 result.tar.gz
2026-03-05 14:51:20 (24240): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 07:32 start_atlas.sh
2026-03-05 14:51:20 (24240): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 14:51:20 (24240): VM Completion File Detected.
2026-03-05 14:51:20 (24240): Powering off VM.
2026-03-05 14:51:20 (24240): Successfully stopped VM.
2026-03-05 14:51:20 (24240): Deregistering VM. (boinc_adbb35e0207d7a14, slot#0)
2026-03-05 14:51:20 (24240): Removing network bandwidth throttle group from VM.
2026-03-05 14:51:20 (24240): Removing VM from VirtualBox.
2026-03-05 14:51:26 (24240): called boinc_finish(0)

</stderr_txt>
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