Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:09:42 (23871): wrapper (7.7.26015): starting
11:09:42 (23871): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 11:09:42] Arguments: --nthreads 8
[2026-03-05 11:09:42] Threads: 8
[2026-03-05 11:09:42] Checking for CVMFS
[2026-03-05 11:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 11:09:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 11:09:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 11:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 11:09:48] 2.11.2.0 23641 114475 133788 156914 2 54 15851535 25165825 96 130560 156 37030981 99.829 25178178 926 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-05 11:09:48] CVMFS is ok
[2026-03-05 11:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 11:09:48] Checking for apptainer binary...
[2026-03-05 11:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 11:09:48] Running /usr/bin/apptainer --version
[2026-03-05 11:09:48] apptainer version 1.3.2-1.el7
[2026-03-05 11:09:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 11:09:55] cg-vwn478.simple-grid.lan
[2026-03-05 11:09:55] apptainer works
[2026-03-05 11:09:55] Set ATHENA_PROC_NUMBER=8
[2026-03-05 11:09:55] Set ATHENA_CORE_NUMBER=8
[2026-03-05 11:09:55] Starting ATLAS job with PandaID=7038525033
[2026-03-05 11:09:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 15:02:00]  *** The last 200 lines of the pilot log: ***
[2026-03-05 15:02:01] 2026-03-05 14:01:21,744 | INFO     | extracted standard info from prmon json
[2026-03-05 15:02:01] 2026-03-05 14:01:21,744 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 15:02:01] 2026-03-05 14:01:21,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 15:02:01] 2026-03-05 14:01:21,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 15:02:01] 2026-03-05 14:01:21,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 15:02:01] 2026-03-05 14:01:21,749 | INFO     | fitting pss+swap vs Time
[2026-03-05 15:02:01] 2026-03-05 14:01:21,750 | INFO     | sum of square deviations: 3168461268.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,752 | INFO     | sum of deviations: 83354672379.00002
[2026-03-05 15:02:01] 2026-03-05 14:01:21,752 | INFO     | mean x: 1772712671.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,752 | INFO     | mean y: 2404972.8479262674
[2026-03-05 15:02:01] 2026-03-05 14:01:21,752 | INFO     | intersect: -46633444865.57498
[2026-03-05 15:02:01] 2026-03-05 14:01:21,753 | INFO     | chi2: 10.840812579545286
[2026-03-05 15:02:01] 2026-03-05 14:01:21,753 | INFO     | sum of square deviations: 2954447953.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,755 | INFO     | sum of deviations: 110635282210.99998
[2026-03-05 15:02:01] 2026-03-05 14:01:21,755 | INFO     | mean x: 1772712518.5
[2026-03-05 15:02:01] 2026-03-05 14:01:21,755 | INFO     | mean y: 2424120.962264151
[2026-03-05 15:02:01] 2026-03-05 14:01:21,756 | INFO     | intersect: -66380383389.344894
[2026-03-05 15:02:01] 2026-03-05 14:01:21,756 | INFO     | chi2: 9.381824739848328
[2026-03-05 15:02:01] 2026-03-05 14:01:21,756 | INFO     | current chi2=9.381824739848328 (change=13.458288564547386 %)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,756 | INFO     | right removable region: 211
[2026-03-05 15:02:01] 2026-03-05 14:01:21,757 | INFO     | sum of square deviations: 2954447953.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,759 | INFO     | sum of deviations: 8273601044.000011
[2026-03-05 15:02:01] 2026-03-05 14:01:21,759 | INFO     | mean x: 1772712823.5
[2026-03-05 15:02:01] 2026-03-05 14:01:21,759 | INFO     | mean y: 2458440.0188679243
[2026-03-05 15:02:01] 2026-03-05 14:01:21,759 | INFO     | intersect: -4961825548.239905
[2026-03-05 15:02:01] 2026-03-05 14:01:21,760 | INFO     | chi2: 5.522628400071797
[2026-03-05 15:02:01] 2026-03-05 14:01:21,760 | INFO     | current chi2=5.522628400071797 (change=49.05706228616082 %)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,760 | INFO     | sum of square deviations: 2750295288.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,762 | INFO     | sum of deviations: -52275087345.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,762 | INFO     | mean x: 1772712976.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,762 | INFO     | mean y: 2503623.6086956523
[2026-03-05 15:02:01] 2026-03-05 14:01:21,762 | INFO     | intersect: 33696604057.96718
[2026-03-05 15:02:01] 2026-03-05 14:01:21,763 | INFO     | chi2: 2.3574006440504647
[2026-03-05 15:02:01] 2026-03-05 14:01:21,763 | INFO     | current chi2=2.3574006440504647 (change=57.3137920338834 %)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,763 | INFO     | sum of square deviations: 2555770710.5
[2026-03-05 15:02:01] 2026-03-05 14:01:21,765 | INFO     | sum of deviations: -68903828712.5
[2026-03-05 15:02:01] 2026-03-05 14:01:21,765 | INFO     | mean x: 1772713128.5
[2026-03-05 15:02:01] 2026-03-05 14:01:21,765 | INFO     | mean y: 2516516.193069307
[2026-03-05 15:02:01] 2026-03-05 14:01:21,765 | INFO     | intersect: 47795036111.45353
[2026-03-05 15:02:01] 2026-03-05 14:01:21,766 | INFO     | chi2: 1.9000348341486848
[2026-03-05 15:02:01] 2026-03-05 14:01:21,766 | INFO     | current chi2=1.9000348341486848 (change=19.4012761918966 %)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,766 | INFO     | left removable region: 30
[2026-03-05 15:02:01] 2026-03-05 14:01:21,766 | INFO     | sum of square deviations: 1838657730.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,768 | INFO     | sum of deviations: -21479161765.999996
[2026-03-05 15:02:01] 2026-03-05 14:01:21,768 | INFO     | mean x: 1772713403.0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,768 | INFO     | mean y: 2523079.817679558
[2026-03-05 15:02:01] 2026-03-05 14:01:21,768 | INFO     | intersect: 20711324574.80465
[2026-03-05 15:02:01] 2026-03-05 14:01:21,769 | INFO     | chi2: 0.15092042074759204
[2026-03-05 15:02:01] 2026-03-05 14:01:21,769 | INFO     | current memory leak: -11.68 B/s (using 181 data points, chi2=0.15)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,769 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | ..............................
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . Timing measurements:
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . get job = 0 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . initial setup = 113 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . payload setup = 162 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . stage-in = 0 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,770 | INFO     | . payload execution = 13327 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,771 | INFO     | . stage-out = 3 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,771 | INFO     | . log creation = 1 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,771 | INFO     | ..............................
[2026-03-05 15:02:01] 2026-03-05 14:01:21,781 | INFO     | time since job start (13516s) is within the limit (349056.0s)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,887 | INFO     | 
[2026-03-05 15:02:01] 2026-03-05 14:01:21,887 | INFO     | job summary report
[2026-03-05 15:02:01] 2026-03-05 14:01:21,887 | INFO     | --------------------------------------------------
[2026-03-05 15:02:01] 2026-03-05 14:01:21,887 | INFO     | PanDA job id: 7038525033
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | task id: 48955015
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | errors: (none)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | pilot state: finished 
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | transexitcode: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | exeerrorcode: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | exeerrordiag: 
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | exitcode: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | exitmsg: OK
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | cpuconsumptiontime: 49265 s
[2026-03-05 15:02:01] 2026-03-05 14:01:21,888 | INFO     | nevents: 400
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | neventsw: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | pid: 32263
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | pgrp: 32263
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | corecount: 8
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | event service: False
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | sizes: {0: 2295321, 1: 2295782, 12: 2295782, 13493: 2326015, 13497: 2335013, 13501: 2335069, 13504: 2335391}
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | --------------------------------------------------
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | 
[2026-03-05 15:02:01] 2026-03-05 14:01:21,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-05 15:02:01] 2026-03-05 14:01:21,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,913 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 15:02:01] 2026-03-05 14:01:21,913 | INFO     | job 7038525033 has completed (purged errors)
[2026-03-05 15:02:01] 2026-03-05 14:01:21,913 | INFO     | overall cleanup function is called
[2026-03-05 15:02:01] 2026-03-05 14:01:22,921 | INFO     | --- collectZombieJob: --- 10, [32263]
[2026-03-05 15:02:01] 2026-03-05 14:01:22,922 | INFO     | zombie collector waiting for pid 32263
[2026-03-05 15:02:01] 2026-03-05 14:01:22,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 15:02:01] 2026-03-05 14:01:22,922 | INFO     | collected zombie processes
[2026-03-05 15:02:01] 2026-03-05 14:01:22,922 | INFO     | will attempt to kill all subprocesses of pid=32263
[2026-03-05 15:02:01] 2026-03-05 14:01:22,997 | INFO     | process IDs to be killed: [32263] (in reverse order)
[2026-03-05 15:02:01] 2026-03-05 14:01:23,817 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 15:02:01] 2026-03-05 14:01:23,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 15:02:01] 2026-03-05 14:01:23,820 | INFO     | did not find any defunct processes belonging to 32263
[2026-03-05 15:02:01] 2026-03-05 14:01:23,821 | INFO     | did not find any defunct processes belonging to 32263
[2026-03-05 15:02:01] 2026-03-05 14:01:23,822 | INFO     | ready for new job
[2026-03-05 15:02:01] 2026-03-05 14:01:23,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 15:02:01] 2026-03-05 14:01:23,824 | INFO     | **************************************
[2026-03-05 15:02:01] 2026-03-05 14:01:23,824 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 15:02:01] 2026-03-05 14:01:23,824 | INFO     | **************************************
[2026-03-05 15:02:01] 2026-03-05 14:01:23,825 | INFO     | 
[2026-03-05 15:02:01] 2026-03-05 14:01:23,825 | INFO     | pilot is running in a VM
[2026-03-05 15:02:01] 2026-03-05 14:01:23,825 | INFO     | architecture information:
[2026-03-05 15:02:01] 2026-03-05 14:01:23,833 | INFO     | executing command: cat /etc/os-release
[2026-03-05 15:02:01] 2026-03-05 14:01:23,906 | INFO     | cat /etc/os-release:
[2026-03-05 15:02:01] NAME="CentOS Linux"
[2026-03-05 15:02:01] VERSION="7 (Core)"
[2026-03-05 15:02:01] ID="centos"
[2026-03-05 15:02:01] ID_LIKE="rhel fedora"
[2026-03-05 15:02:01] VERSION_ID="7"
[2026-03-05 15:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 15:02:01] ANSI_COLOR="0;31"
[2026-03-05 15:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 15:02:01] HOME_URL="https://www.centos.org/"
[2026-03-05 15:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 15:02:01] 
[2026-03-05 15:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 15:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 15:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 15:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 15:02:01] 
[2026-03-05 15:02:01] 2026-03-05 14:01:23,906 | INFO     | **************************************
[2026-03-05 15:02:01] 2026-03-05 14:01:24,410 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-05 15:02:01] 2026-03-05 14:01:24,653 | INFO     | sufficient remaining disk space (495586377728 B)
[2026-03-05 15:02:01] 2026-03-05 14:01:24,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 15:02:01] 2026-03-05 14:01:24,654 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 15:02:01] 2026-03-05 14:01:24,654 | INFO     | update_server=False
[2026-03-05 15:02:01] 2026-03-05 14:01:24,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 15:02:01] 2026-03-05 14:01:24,881 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 15:02:01] 2026-03-05 14:01:24,882 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 15:02:01] 2026-03-05 14:01:24,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 15:02:01] 2026-03-05 14:01:24,882 | INFO     | will abort loop
[2026-03-05 15:02:01] 2026-03-05 14:01:24,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 15:02:01] 2026-03-05 14:01:25,131 | INFO     | all job control threads have been joined
[2026-03-05 15:02:01] 2026-03-05 14:01:25,401 | INFO     | all data control threads have been joined
[2026-03-05 15:02:01] 2026-03-05 14:01:25,660 | INFO     | [job] retrieve thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:25,734 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:25,797 | INFO     | [data] copytool_in thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:25,800 | INFO     | all payload control threads have been joined
[2026-03-05 15:02:01] 2026-03-05 14:01:25,888 | INFO     | [job] job monitor thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:25,899 | INFO     | [job] validate thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 15:02:01] 2026-03-05 14:01:26,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,138 | INFO     | [job] control thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,149 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,274 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,408 | INFO     | [data] control thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,807 | INFO     | [payload] control thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:26,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 15:02:01] 2026-03-05 14:01:27,044 | INFO     | [payload] validate_post thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:27,082 | INFO     | [payload] failed_post thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:27,911 | INFO     | [job] queue monitor thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:28,033 | INFO     | [monitor] cgroup control has ended
[2026-03-05 15:02:01] 2026-03-05 14:01:28,117 | INFO     | [data] copytool_out thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:28,906 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 15:02:01] 2026-03-05 14:01:29,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672319399744)>', '<ExcThread(monitor, started 140671881029376)>']
[2026-03-05 15:02:01] 2026-03-05 14:01:34,074 | INFO     | all workflow threads have been joined
[2026-03-05 15:02:01] 2026-03-05 14:01:34,075 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 15:02:01] 2026-03-05 14:01:34,075 | INFO     | traces error code: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:34,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 15:02:01] 2026-03-05 14:01:54,902 | INFO     | PID=27831 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 15:02:01] 2026-03-05 14:01:54,902 | INFO     | .. there are 2 such processes running
[2026-03-05 15:02:01] 2026-03-05 14:01:54,903 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 15:02:01] 2026-03-05 14:01:54,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 15:02:01] 2026-03-05 14:01:54,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 15:02:01] 2026-03-05 14:01:54,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 15:02:01] 2026-03-05 14:01:54,904 | CRITICAL | thread 'MainThread' is not alive
[2026-03-05 15:02:01] 2026-03-05 14:01:54,904 | INFO     | [monitor] control thread has ended
[2026-03-05 15:02:01] 2026-03-05 14:01:55,421 [wrapper] ==== pilot stdout END ====
[2026-03-05 15:02:01] 2026-03-05 14:01:55,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 15:02:01] 2026-03-05 14:01:55,593 [wrapper] pilotpid: 27831
[2026-03-05 15:02:01] 2026-03-05 14:01:55,652 [wrapper] Pilot exit status: 0
[2026-03-05 15:02:01] 2026-03-05 14:01:56,254 [wrapper] pandaids: 7038525033
[2026-03-05 15:02:01] 2026-03-05 14:01:57,442 [wrapper] cleanup supervisor_pilot  6042 27832
[2026-03-05 15:02:01] 2026-03-05 14:01:57,536 [wrapper] Test setup, not cleaning
[2026-03-05 15:02:01] 2026-03-05 14:01:57,651 [wrapper] apfmon messages muted
[2026-03-05 15:02:01] 2026-03-05 14:01:57,801 [wrapper] ==== wrapper stdout END ====
[2026-03-05 15:02:01] 2026-03-05 14:01:57,935 [wrapper] ==== wrapper stderr END ====
[2026-03-05 15:02:01]  *** Error codes and diagnostics ***
[2026-03-05 15:02:01]     "exeErrorCode": 0,
[2026-03-05 15:02:01]     "exeErrorDiag": "",
[2026-03-05 15:02:01]     "pilotErrorCode": 0,
[2026-03-05 15:02:01]     "pilotErrorDiag": "",
[2026-03-05 15:02:01]  *** Listing of results directory ***
[2026-03-05 15:02:01] total 623320
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc    584627 Mar  4 23:45 pilot3.tar.gz
[2026-03-05 15:02:01] -rwx------. 1 boinc boinc     36322 Mar  4 23:46 runpilot2-wrapper.sh
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc      5111 Mar  4 23:46 queuedata.json
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc       100 Mar  5 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 15:02:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 11:09 run_atlas
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc       105 Mar  5 11:09 job.xml
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc      6391 Mar  5 11:09 init_data.xml
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc 441270790 Mar  5 11:09 EVNT.46701403._002083.pool.root.1
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc     15845 Mar  5 11:09 start_atlas.sh
[2026-03-05 15:02:01] drwxrwx--x. 2 boinc boinc        68 Mar  5 11:09 shared
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc    597949 Mar  5 11:09 input.tar.gz
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc         0 Mar  5 11:09 boinc_lockfile
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc      2567 Mar  5 11:09 pandaJob.out
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc       415 Mar  5 11:15 workernode_map.json
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc    998505 Mar  5 11:16 agis_schedconf.cvmfs.json
[2026-03-05 15:02:01] drwx------. 5 boinc boinc      4096 Mar  5 11:16 pilot3
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc 188374780 Mar  5 14:59 HITS.48955015._001967.pool.root.1
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc       532 Mar  5 15:00 boinc_task_state.xml
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc      1011 Mar  5 15:01 memory_monitor_summary.json
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc   1521291 Mar  5 15:01 agis_ddmendpoints.agis.ALL.json
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc    455114 Mar  5 15:01 log.48955015._001967.job.log.tgz.1
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc      6321 Mar  5 15:01 heartbeat.json
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc        95 Mar  5 15:01 pilot_heartbeat.json
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc       890 Mar  5 15:01 pilotlog.txt
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc      8192 Mar  5 15:01 boinc_mmap_file
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc        28 Mar  5 15:01 wrapper_checkpoint.txt
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc   1902857 Mar  5 15:01 log.48955015._001967.job.log.1
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc       357 Mar  5 15:01 output.list
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc       620 Mar  5 15:02 runtime_log
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc   2375680 Mar  5 15:02 result.tar.gz
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc      8816 Mar  5 15:02 runtime_log.err
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc       656 Mar  5 15:02 JryKDmBAAI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmv7LLDm85u11n.diag
[2026-03-05 15:02:01] -rw-r--r--. 1 boinc boinc     20656 Mar  5 15:02 stderr.txt
[2026-03-05 15:02:01] HITS file was successfully produced:
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc 188374780 Mar  5 14:59 shared/HITS.pool.root.1
[2026-03-05 15:02:01]  *** Contents of shared directory: ***
[2026-03-05 15:02:01] total 617812
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc 441270790 Mar  5 11:09 ATLAS.root_0
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc     15845 Mar  5 11:09 start_atlas.sh
[2026-03-05 15:02:01] -rw-r--r--. 2 boinc boinc    597949 Mar  5 11:09 input.tar.gz
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc 188374780 Mar  5 14:59 HITS.pool.root.1
[2026-03-05 15:02:01] -rw-------. 1 boinc boinc   2375680 Mar  5 15:02 result.tar.gz
15:02:02 (23871): run_atlas exited; CPU time 49403.255250
15:02:02 (23871): called boinc_finish(0)

</stderr_txt>
]]>

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