Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:47 (126068): wrapper (7.7.26015): starting
09:23:47 (126068): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 09:23:47] Arguments: --nthreads 4
[2026-03-05 09:23:47] Threads: 4
[2026-03-05 09:23:47] Checking for CVMFS
[2026-03-05 09:23:47] No cvmfs_config command found, will try listing directly
[2026-03-05 09:23:47] CVMFS is ok
[2026-03-05 09:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 09:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 09:23:47] Further information can be found at the LHC@home message board.
[2026-03-05 09:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 09:23:47] Checking for apptainer binary...
[2026-03-05 09:23:47] which: no apptainer in ((null))
[2026-03-05 09:23:47] apptainer is not installed, using version from CVMFS
[2026-03-05 09:23:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 09:23:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-05 09:23:47] apptainer works
[2026-03-05 09:23:47] Set ATHENA_PROC_NUMBER=4
[2026-03-05 09:23:47] Set ATHENA_CORE_NUMBER=4
[2026-03-05 09:23:47] Starting ATLAS job with PandaID=7038555696
[2026-03-05 09:23:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 10:45:14]  *** The last 200 lines of the pilot log: ***
[2026-03-05 10:45:14]  filetype=log
[2026-03-05 10:45:14]  guid=ed1b2929-965c-4d31-ae53-c13f2cb9def3
[2026-03-05 10:45:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 10:45:14]  is_altstaged=None
[2026-03-05 10:45:14]  is_tar=False
[2026-03-05 10:45:14]  lfn=log.48955015._003481.job.log.tgz.1
[2026-03-05 10:45:14]  mtime=0
[2026-03-05 10:45:14]  protocol_id=None
[2026-03-05 10:45:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 10:45:14]  replicas=None
[2026-03-05 10:45:14]  scope=mc23_13p6TeV
[2026-03-05 10:45:14]  status=None
[2026-03-05 10:45:14]  status_code=0
[2026-03-05 10:45:14]  storage_token=
[2026-03-05 10:45:14]  surl=/var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7038555696/log.48955015._003481.job.log.tgz.1
[2026-03-05 10:45:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9d/log.48955015._003481.job.log.tgz.1
[2026-03-05 10:45:14]  workdir=None
[2026-03-05 10:45:14] ]
[2026-03-05 10:45:14] 2026-03-05 09:44:31,344 | INFO     | transferring file log.48955015._003481.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7038555696/log.48955015._003481.job.log.tgz.1 to /var/lib/b
[2026-03-05 10:45:14] 2026-03-05 09:44:31,344 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7038555696/log.48955015._003481.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/3/lo
[2026-03-05 10:45:14] 2026-03-05 09:44:31,359 | INFO     | adding to output.list: log.48955015._003481.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9d/log.48955015._003481.job.log.tg
[2026-03-05 10:45:14] 2026-03-05 09:44:31,360 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 10:45:14] 2026-03-05 09:44:31,360 | INFO     | summary of transferred files:
[2026-03-05 10:45:14] 2026-03-05 09:44:31,360 | INFO     |  -- lfn=log.48955015._003481.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 10:45:14] 2026-03-05 09:44:31,360 | INFO     | stage-out finished correctly
[2026-03-05 10:45:14] 2026-03-05 09:44:32,837 | INFO     | time since job start (4831s) is within the limit (349056.0s)
[2026-03-05 10:45:14] 2026-03-05 09:44:32,890 | INFO     | monitor loop #351: job 0:7038555696 is in state 'finished'
[2026-03-05 10:45:14] 2026-03-05 09:44:32,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,835 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 10:45:14] 2026-03-05 09:44:33,884 | INFO     | job 7038555696 has state=finished
[2026-03-05 10:45:14] 2026-03-05 09:44:33,885 | INFO     | preparing for final server update for job 7038555696 in state='finished'
[2026-03-05 10:45:14] 2026-03-05 09:44:33,885 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7038555696/jobReport.json
[2026-03-05 10:45:14] 2026-03-05 09:44:33,886 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/3/workernode_map.json
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | INFO     | this job has now completed (state=finished)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | INFO     | log transfer has been attempted: DONE
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | INFO     | job 7038555696 has finished - writing final server update
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1453165/.job.ad'
[2026-03-05 10:45:14] 2026-03-05 09:44:33,887 | INFO     | total number of processed events: 400 (read)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,905 | INFO     | using path: /var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7038555696/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,905 | INFO     | extracted standard info from prmon json
[2026-03-05 10:45:14] 2026-03-05 09:44:33,905 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 10:45:14] 2026-03-05 09:44:33,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 10:45:14] 2026-03-05 09:44:33,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 10:45:14] 2026-03-05 09:44:33,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | fitting pss+swap vs Time
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | sum of square deviations: 115715658.0
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | sum of deviations: 103880346.49999999
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | mean x: 1772701532.5
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | mean y: 2331831.402777778
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | intersect: -1589059105.8304617
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | chi2: 0.001348922723949411
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | current memory leak: 0.90 B/s (using 72 data points, chi2=0.00)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,907 | INFO     | could have reported an average CPU frequency of 3565 MHz (6 samples)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | ..............................
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . Timing measurements:
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . get job = 0 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . initial setup = 5 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . payload setup = 5 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . stage-in = 0 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . payload execution = 4808 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . stage-out = 0 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | . log creation = 0 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,908 | INFO     | ..............................
[2026-03-05 10:45:14] 2026-03-05 09:44:33,957 | INFO     | 
[2026-03-05 10:45:14] 2026-03-05 09:44:33,957 | INFO     | job summary report
[2026-03-05 10:45:14] 2026-03-05 09:44:33,957 | INFO     | --------------------------------------------------
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | PanDA job id: 7038555696
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | task id: 48955015
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | errors: (none)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | pilot state: finished 
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | transexitcode: 0
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | exeerrorcode: 0
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | exeerrordiag: 
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | exitcode: 0
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | exitmsg: OK
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | cpuconsumptiontime: 18489 s
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | nevents: 400
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | neventsw: 0
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | pid: 136518
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | pgrp: 136518
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | corecount: 4
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | event service: False
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | sizes: {0: 2295820, 11: 2295820, 4817: 2322102, 4819: 2331122, 4822: 2331372}
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | --------------------------------------------------
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | 
[2026-03-05 10:45:14] 2026-03-05 09:44:33,958 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/3
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,977 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 10:45:14] 2026-03-05 09:44:33,978 | INFO     | job 7038555696 has completed (purged errors)
[2026-03-05 10:45:14] 2026-03-05 09:44:33,978 | INFO     | overall cleanup function is called
[2026-03-05 10:45:14] 2026-03-05 09:44:34,984 | INFO     | --- collectZombieJob: --- 10, [136518]
[2026-03-05 10:45:14] 2026-03-05 09:44:34,984 | INFO     | zombie collector waiting for pid 136518
[2026-03-05 10:45:14] 2026-03-05 09:44:34,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 10:45:14] 2026-03-05 09:44:34,984 | INFO     | collected zombie processes
[2026-03-05 10:45:14] 2026-03-05 09:44:34,984 | INFO     | will attempt to kill all subprocesses of pid=136518
[2026-03-05 10:45:14] 2026-03-05 09:44:35,403 | INFO     | process IDs to be killed: [136518] (in reverse order)
[2026-03-05 10:45:14] 2026-03-05 09:44:35,620 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 10:45:14] 2026-03-05 09:44:35,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 10:45:14] 2026-03-05 09:44:35,650 | INFO     | did not find any defunct processes belonging to 136518
[2026-03-05 10:45:14] 2026-03-05 09:44:35,679 | INFO     | did not find any defunct processes belonging to 136518
[2026-03-05 10:45:14] 2026-03-05 09:44:35,680 | INFO     | ready for new job
[2026-03-05 10:45:14] 2026-03-05 09:44:35,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 10:45:14] 2026-03-05 09:44:35,681 | INFO     | **************************************
[2026-03-05 10:45:14] 2026-03-05 09:44:35,681 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 10:45:14] 2026-03-05 09:44:35,681 | INFO     | **************************************
[2026-03-05 10:45:14] 2026-03-05 09:44:35,681 | INFO     | 
[2026-03-05 10:45:14] 2026-03-05 09:44:35,687 | INFO     | architecture information:
[2026-03-05 10:45:14] 2026-03-05 09:44:35,687 | INFO     | executing command: cat /etc/os-release
[2026-03-05 10:45:14] 2026-03-05 09:44:35,700 | INFO     | cat /etc/os-release:
[2026-03-05 10:45:14] NAME="CentOS Linux"
[2026-03-05 10:45:14] VERSION="7 (Core)"
[2026-03-05 10:45:14] ID="centos"
[2026-03-05 10:45:14] ID_LIKE="rhel fedora"
[2026-03-05 10:45:14] VERSION_ID="7"
[2026-03-05 10:45:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 10:45:14] ANSI_COLOR="0;31"
[2026-03-05 10:45:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 10:45:14] HOME_URL="https://www.centos.org/"
[2026-03-05 10:45:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 10:45:14] 
[2026-03-05 10:45:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 10:45:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 10:45:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 10:45:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 10:45:14] 
[2026-03-05 10:45:14] 2026-03-05 09:44:35,700 | INFO     | **************************************
[2026-03-05 10:45:14] 2026-03-05 09:44:36,203 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/3
[2026-03-05 10:45:14] 2026-03-05 09:44:36,218 | INFO     | sufficient remaining disk space (20663238656 B)
[2026-03-05 10:45:14] 2026-03-05 09:44:36,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 10:45:14] 2026-03-05 09:44:36,219 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 10:45:14] 2026-03-05 09:44:36,219 | INFO     | update_server=False
[2026-03-05 10:45:14] 2026-03-05 09:44:36,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 10:45:14] 2026-03-05 09:44:36,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 10:45:14] 2026-03-05 09:44:36,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:45:14] 2026-03-05 09:44:36,396 | INFO     | aborting loop
[2026-03-05 10:45:14] 2026-03-05 09:44:36,769 | INFO     | all data control threads have been joined
[2026-03-05 10:45:14] 2026-03-05 09:44:36,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 10:45:14] 2026-03-05 09:44:37,224 | INFO     | [job] retrieve thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,253 | INFO     | all payload control threads have been joined
[2026-03-05 10:45:14] 2026-03-05 09:44:37,400 | INFO     | [job] job monitor thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,749 | INFO     | [job] validate thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,774 | INFO     | [data] control thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,876 | INFO     | all job control threads have been joined
[2026-03-05 10:45:14] 2026-03-05 09:44:37,903 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,928 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:37,967 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,027 | INFO     | [payload] failed_post thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,251 | INFO     | [data] copytool_in thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,257 | INFO     | [payload] control thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,744 | INFO     | [payload] validate_post thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,882 | INFO     | [job] control thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,928 | INFO     | [data] copytool_out thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:38,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 10:45:14] 2026-03-05 09:44:39,972 | INFO     | [job] queue monitor thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:40,221 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:44:46,609 | INFO     | job.realtimelogging is not enabled
[2026-03-05 10:45:14] 2026-03-05 09:44:47,614 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 10:45:14] 2026-03-05 09:45:06,435 | INFO     | PID=130608 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 10:45:14] 2026-03-05 09:45:06,435 | INFO     | .. there are 46 such processes running
[2026-03-05 10:45:14] 2026-03-05 09:45:06,435 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 10:45:14] 2026-03-05 09:45:06,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 10:45:14] 2026-03-05 09:45:06,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 10:45:14] 2026-03-05 09:45:08,762 | INFO     | [monitor] cgroup control has ended
[2026-03-05 10:45:14] 2026-03-05 09:45:08,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23329459664704)>', '<ExcThread(monitor, started 23329215088384)>']
[2026-03-05 10:45:14] 2026-03-05 09:45:09,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 10:45:14] 2026-03-05 09:45:09,450 | INFO     | [monitor] control thread has ended
[2026-03-05 10:45:14] 2026-03-05 09:45:13,915 | INFO     | all workflow threads have been joined
[2026-03-05 10:45:14] 2026-03-05 09:45:13,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 10:45:14] 2026-03-05 09:45:13,915 | INFO     | traces error code: 0
[2026-03-05 10:45:14] 2026-03-05 09:45:13,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 10:45:14] 2026-03-05 09:45:14,117 [wrapper] ==== pilot stdout END ====
[2026-03-05 10:45:14] 2026-03-05 09:45:14,119 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 10:45:14] 2026-03-05 09:45:14,121 [wrapper] pilotpid: 130608
[2026-03-05 10:45:14] 2026-03-05 09:45:14,124 [wrapper] Pilot exit status: 0
[2026-03-05 10:45:14] 2026-03-05 09:45:14,131 [wrapper] pandaids: 7038555696
[2026-03-05 10:45:14] 2026-03-05 09:45:14,260 [wrapper] cleanup supervisor_pilot  833480 130609
[2026-03-05 10:45:14] 2026-03-05 09:45:14,262 [wrapper] Test setup, not cleaning
[2026-03-05 10:45:14] 2026-03-05 09:45:14,264 [wrapper] apfmon messages muted
[2026-03-05 10:45:14] 2026-03-05 09:45:14,266 [wrapper] ==== wrapper stdout END ====
[2026-03-05 10:45:14] 2026-03-05 09:45:14,268 [wrapper] ==== wrapper stderr END ====
[2026-03-05 10:45:14]  *** Error codes and diagnostics ***
[2026-03-05 10:45:14]     "exeErrorCode": 0,
[2026-03-05 10:45:14]     "exeErrorDiag": "",
[2026-03-05 10:45:14]     "pilotErrorCode": 0,
[2026-03-05 10:45:14]     "pilotErrorDiag": "",
[2026-03-05 10:45:14]  *** Listing of results directory ***
[2026-03-05 10:45:14] total 621852
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc    584627 Mar  5 03:30 pilot3.tar.gz
[2026-03-05 10:45:14] -rwx------. 1 boinc boinc     36322 Mar  5 03:31 runpilot2-wrapper.sh
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc      5111 Mar  5 03:32 queuedata.json
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc       100 Mar  5 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 10:45:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 09:23 run_atlas
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc       105 Mar  5 09:23 job.xml
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc      6703 Mar  5 09:23 init_data.xml
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc 440220514 Mar  5 09:23 EVNT.46701403._002114.pool.root.1
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc    597959 Mar  5 09:23 input.tar.gz
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc     15845 Mar  5 09:23 start_atlas.sh
[2026-03-05 10:45:14] drwxrwx--x. 2 boinc boinc      4096 Mar  5 09:23 shared
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc         0 Mar  5 09:23 boinc_lockfile
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc      2570 Mar  5 09:23 pandaJob.out
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc    997727 Mar  5 09:23 agis_schedconf.cvmfs.json
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc   1521291 Mar  5 09:23 agis_ddmendpoints.agis.ALL.json
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc       444 Mar  5 09:24 workernode_map.json
[2026-03-05 10:45:14] drwx------. 5 boinc boinc      4096 Mar  5 09:24 pilot3
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc       530 Mar  5 10:44 boinc_task_state.xml
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc 190624652 Mar  5 10:44 HITS.48955015._003481.pool.root.1
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc      1029 Mar  5 10:44 memory_monitor_summary.json
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc        95 Mar  5 10:44 pilot_heartbeat.json
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc    290673 Mar  5 10:44 log.48955015._003481.job.log.tgz.1
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc      6347 Mar  5 10:44 heartbeat.json
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc      8192 Mar  5 10:45 boinc_mmap_file
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc        27 Mar  5 10:45 wrapper_checkpoint.txt
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc      4900 Mar  5 10:45 pilotlog.txt
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc    706502 Mar  5 10:45 log.48955015._003481.job.log.1
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc       357 Mar  5 10:45 output.list
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc       620 Mar  5 10:45 runtime_log
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc   1013760 Mar  5 10:45 result.tar.gz
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc      9204 Mar  5 10:45 runtime_log.err
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc       663 Mar  5 10:45 pNAMDmbfDI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZaKLDmXIn4Zm.diag
[2026-03-05 10:45:14] -rw-r--r--. 1 boinc boinc     21120 Mar  5 10:45 stderr.txt
[2026-03-05 10:45:14] HITS file was successfully produced:
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc 190624652 Mar  5 10:44 shared/HITS.pool.root.1
[2026-03-05 10:45:14]  *** Contents of shared directory: ***
[2026-03-05 10:45:14] total 617664
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc 440220514 Mar  5 09:23 ATLAS.root_0
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc    597959 Mar  5 09:23 input.tar.gz
[2026-03-05 10:45:14] -rw-r--r--. 2 boinc boinc     15845 Mar  5 09:23 start_atlas.sh
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc 190624652 Mar  5 10:44 HITS.pool.root.1
[2026-03-05 10:45:14] -rw-------. 1 boinc boinc   1013760 Mar  5 10:45 result.tar.gz
10:45:15 (126068): run_atlas exited; CPU time 18700.974560
10:45:15 (126068): called boinc_finish(0)

</stderr_txt>
]]>

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