Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:50:54 (1782351): wrapper (7.7.26015): starting
20:50:54 (1782351): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 20:50:54] Arguments: --nthreads 4
[2026-03-05 20:50:54] Threads: 4
[2026-03-05 20:50:54] Checking for CVMFS
[2026-03-05 20:50:54] No cvmfs_config command found, will try listing directly
[2026-03-05 20:50:54] CVMFS is ok
[2026-03-05 20:50:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 20:50:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 20:50:54] Further information can be found at the LHC@home message board.
[2026-03-05 20:50:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 20:50:54] Checking for apptainer binary...
[2026-03-05 20:50:54] which: no apptainer in ((null))
[2026-03-05 20:50:54] apptainer is not installed, using version from CVMFS
[2026-03-05 20:50:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 20:50:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-05 20:50:54] apptainer works
[2026-03-05 20:50:54] Set ATHENA_PROC_NUMBER=4
[2026-03-05 20:50:54] Set ATHENA_CORE_NUMBER=4
[2026-03-05 20:50:54] Starting ATLAS job with PandaID=7038518452
[2026-03-05 20:50:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 22:11:33]  *** The last 200 lines of the pilot log: ***
[2026-03-05 22:11:33]  workdir=None
[2026-03-05 22:11:33] ]
[2026-03-05 22:11:33] 2026-03-05 21:10:58,555 | INFO     | transferring file log.48955010._002459.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/log.48955010._002459.job.log.tgz.1 to /var/lib/
[2026-03-05 22:11:33] 2026-03-05 21:10:58,556 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/log.48955010._002459.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-05 22:11:33] 2026-03-05 21:10:58,574 | INFO     | adding to output.list: log.48955010._002459.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/14/log.48955010._002459.job.log.tg
[2026-03-05 22:11:33] 2026-03-05 21:10:58,574 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 22:11:33] 2026-03-05 21:10:58,574 | INFO     | summary of transferred files:
[2026-03-05 22:11:33] 2026-03-05 21:10:58,575 | INFO     |  -- lfn=log.48955010._002459.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 22:11:33] 2026-03-05 21:10:58,575 | INFO     | stage-out finished correctly
[2026-03-05 22:11:33] 2026-03-05 21:10:59,077 | INFO     | time since job start (4792s) is within the limit (349056.0s)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,256 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 22:11:33] 2026-03-05 21:11:00,314 | INFO     | job 7038518452 has state=finished
[2026-03-05 22:11:33] 2026-03-05 21:11:00,314 | INFO     | preparing for final server update for job 7038518452 in state='finished'
[2026-03-05 22:11:33] 2026-03-05 21:11:00,314 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/jobReport.json
[2026-03-05 22:11:33] 2026-03-05 21:11:00,317 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-05 22:11:33] 2026-03-05 21:11:00,317 | INFO     | this job has now completed (state=finished)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,317 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,317 | INFO     | log transfer has been attempted: DONE
[2026-03-05 22:11:33] 2026-03-05 21:11:00,317 | INFO     | job 7038518452 has finished - writing final server update
[2026-03-05 22:11:33] 2026-03-05 21:11:00,321 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546957/.job.ad'
[2026-03-05 22:11:33] 2026-03-05 21:11:00,321 | INFO     | total number of processed events: 400 (read)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,350 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,354 | INFO     | extracted standard info from prmon json
[2026-03-05 22:11:33] 2026-03-05 21:11:00,354 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 22:11:33] 2026-03-05 21:11:00,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 22:11:33] 2026-03-05 21:11:00,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 22:11:33] 2026-03-05 21:11:00,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | fitting pss+swap vs Time
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | sum of square deviations: 115715658.0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | sum of deviations: 449974796.0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | mean x: 1772742757.5
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | mean y: 2333406.722222222
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | intersect: -6891198328.339423
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | chi2: 0.0006101139487921871
[2026-03-05 22:11:33] 2026-03-05 21:11:00,356 | INFO     | current memory leak: 3.89 B/s (using 72 data points, chi2=0.00)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | could have reported an average CPU frequency of 3591 MHz (6 samples)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | ..............................
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . Timing measurements:
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . get job = 0 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . initial setup = 5 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . payload setup = 5 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . stage-in = 0 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . payload execution = 4771 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . stage-out = 0 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | . log creation = 0 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,357 | INFO     | ..............................
[2026-03-05 22:11:33] 2026-03-05 21:11:00,617 | WARNING  | process 1792889 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 22:11:33] 2026-03-05 21:11:00,621 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,621 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,622 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-05 22:11:33] 2026-03-05 21:11:00,622 | WARNING  | maxPSS not found in memory monitor output
[2026-03-05 22:11:33] 2026-03-05 21:11:00,622 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2238275 B
[2026-03-05 22:11:33] 2026-03-05 21:11:00,622 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15851 B
[2026-03-05 22:11:33] 2026-03-05 21:11:00,622 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,643 | INFO     | sufficient remaining disk space (20694695936 B)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,644 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,644 | INFO     | size of work directory /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452: 2538358 B (within 5033164800 B limit)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,644 | INFO     | pfn file=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/HITS.48955010._002459.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,644 | INFO     | total size of present files: 0 B (workdir size: 2538358 B)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,644 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7038518452/HITS.48955010._002459.pool.root.1 since it does not exist
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | 
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | job summary report
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | --------------------------------------------------
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | PanDA job id: 7038518452
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | task id: 48955010
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | errors: (none)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 22:11:33] 2026-03-05 21:11:00,812 | INFO     | pilot state: finished 
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | transexitcode: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | exeerrorcode: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | exeerrordiag: 
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | exitcode: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | exitmsg: OK
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | cpuconsumptiontime: 18156 s
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | nevents: 400
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | neventsw: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | pid: 1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | pgrp: 1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | corecount: 4
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | event service: False
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | sizes: {0: 2295758, 11: 2295758, 4780: 2331062, 4782: 2331256}
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | --------------------------------------------------
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | 
[2026-03-05 22:11:33] 2026-03-05 21:11:00,813 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-05 22:11:33] 2026-03-05 21:11:00,834 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,834 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,834 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,834 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | job 7038518452 has completed (purged errors)
[2026-03-05 22:11:33] 2026-03-05 21:11:00,835 | INFO     | overall cleanup function is called
[2026-03-05 22:11:33] 2026-03-05 21:11:01,150 | INFO     | number of running child processes to parent process 1792889: 1
[2026-03-05 22:11:33] 2026-03-05 21:11:01,150 | INFO     | maximum number of monitored processes: 6
[2026-03-05 22:11:33] 2026-03-05 21:11:01,150 | INFO     | aborting job monitoring since job object (job id=7038518452) has expired
[2026-03-05 22:11:33] 2026-03-05 21:11:01,843 | INFO     | --- collectZombieJob: --- 10, [1792889]
[2026-03-05 22:11:33] 2026-03-05 21:11:01,843 | INFO     | zombie collector waiting for pid 1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:01,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 22:11:33] 2026-03-05 21:11:01,844 | INFO     | collected zombie processes
[2026-03-05 22:11:33] 2026-03-05 21:11:01,844 | INFO     | will attempt to kill all subprocesses of pid=1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:02,324 | INFO     | process IDs to be killed: [1792889] (in reverse order)
[2026-03-05 22:11:33] 2026-03-05 21:11:02,556 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 22:11:33] 2026-03-05 21:11:02,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 22:11:33] 2026-03-05 21:11:02,587 | INFO     | did not find any defunct processes belonging to 1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:02,617 | INFO     | did not find any defunct processes belonging to 1792889
[2026-03-05 22:11:33] 2026-03-05 21:11:02,618 | INFO     | ready for new job
[2026-03-05 22:11:33] 2026-03-05 21:11:02,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 22:11:33] 2026-03-05 21:11:02,619 | INFO     | **************************************
[2026-03-05 22:11:33] 2026-03-05 21:11:02,619 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 22:11:33] 2026-03-05 21:11:02,619 | INFO     | **************************************
[2026-03-05 22:11:33] 2026-03-05 21:11:02,619 | INFO     | 
[2026-03-05 22:11:33] 2026-03-05 21:11:02,625 | INFO     | architecture information:
[2026-03-05 22:11:33] 2026-03-05 21:11:02,626 | INFO     | executing command: cat /etc/os-release
[2026-03-05 22:11:33] 2026-03-05 21:11:02,639 | INFO     | cat /etc/os-release:
[2026-03-05 22:11:33] NAME="CentOS Linux"
[2026-03-05 22:11:33] VERSION="7 (Core)"
[2026-03-05 22:11:33] ID="centos"
[2026-03-05 22:11:33] ID_LIKE="rhel fedora"
[2026-03-05 22:11:33] VERSION_ID="7"
[2026-03-05 22:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 22:11:33] ANSI_COLOR="0;31"
[2026-03-05 22:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 22:11:33] HOME_URL="https://www.centos.org/"
[2026-03-05 22:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 22:11:33] 
[2026-03-05 22:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 22:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 22:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 22:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 22:11:33] 
[2026-03-05 22:11:33] 2026-03-05 21:11:02,640 | INFO     | **************************************
[2026-03-05 22:11:33] 2026-03-05 21:11:03,142 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-05 22:11:33] 2026-03-05 21:11:03,161 | INFO     | sufficient remaining disk space (20693647360 B)
[2026-03-05 22:11:33] 2026-03-05 21:11:03,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 22:11:33] 2026-03-05 21:11:03,161 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 22:11:33] 2026-03-05 21:11:03,161 | INFO     | update_server=False
[2026-03-05 22:11:33] 2026-03-05 21:11:03,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 22:11:33] 2026-03-05 21:11:03,392 | INFO     | all payload control threads have been joined
[2026-03-05 22:11:33] 2026-03-05 21:11:03,653 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 22:11:33] 2026-03-05 21:11:03,653 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 22:11:33] 2026-03-05 21:11:03,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:11:33] 2026-03-05 21:11:03,653 | INFO     | will abort loop
[2026-03-05 22:11:33] 2026-03-05 21:11:03,791 | INFO     | all data control threads have been joined
[2026-03-05 22:11:33] 2026-03-05 21:11:03,885 | INFO     | all job control threads have been joined
[2026-03-05 22:11:33] 2026-03-05 21:11:04,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 22:11:33] 2026-03-05 21:11:04,166 | INFO     | [job] retrieve thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,397 | INFO     | [payload] control thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,509 | INFO     | [payload] failed_post thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,550 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,591 | INFO     | [job] validate thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,613 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,658 | INFO     | [job] job monitor thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,796 | INFO     | [data] control thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,890 | INFO     | [job] control thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:04,981 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:05,272 | INFO     | [data] copytool_in thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:05,346 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:05,419 | INFO     | [payload] validate_post thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:05,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 22:11:33] 2026-03-05 21:11:06,142 | INFO     | [data] copytool_out thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:06,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 22:11:33] 2026-03-05 21:11:06,426 | INFO     | [job] queue monitor thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:10,325 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 22:11:33] 2026-03-05 21:11:14,493 | INFO     | [monitor] cgroup control has ended
[2026-03-05 22:11:33] 2026-03-05 21:11:15,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22876988053312)>', '<ExcThread(monitor, started 22876750362368)>']
[2026-03-05 22:11:33] 2026-03-05 21:11:20,773 | INFO     | all workflow threads have been joined
[2026-03-05 22:11:33] 2026-03-05 21:11:20,773 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 22:11:33] 2026-03-05 21:11:20,773 | INFO     | traces error code: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:20,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 22:11:33] 2026-03-05 21:11:32,735 | INFO     | PID=1786887 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 22:11:33] 2026-03-05 21:11:32,735 | INFO     | .. there are 49 such processes running
[2026-03-05 22:11:33] 2026-03-05 21:11:32,736 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 22:11:33] 2026-03-05 21:11:32,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 22:11:33] 2026-03-05 21:11:32,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 22:11:33] 2026-03-05 21:11:32,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 22:11:33] 2026-03-05 21:11:32,736 | INFO     | [monitor] control thread has ended
[2026-03-05 22:11:33] 2026-03-05 21:11:32,910 [wrapper] ==== pilot stdout END ====
[2026-03-05 22:11:33] 2026-03-05 21:11:32,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 22:11:33] 2026-03-05 21:11:32,915 [wrapper] pilotpid: 1786887
[2026-03-05 22:11:33] 2026-03-05 21:11:32,918 [wrapper] Pilot exit status: 0
[2026-03-05 22:11:33] 2026-03-05 21:11:32,926 [wrapper] pandaids: 7038518452
[2026-03-05 22:11:33] 2026-03-05 21:11:33,062 [wrapper] cleanup supervisor_pilot 2497047 1786888
[2026-03-05 22:11:33] 2026-03-05 21:11:33,065 [wrapper] Test setup, not cleaning
[2026-03-05 22:11:33] 2026-03-05 21:11:33,067 [wrapper] apfmon messages muted
[2026-03-05 22:11:33] 2026-03-05 21:11:33,069 [wrapper] ==== wrapper stdout END ====
[2026-03-05 22:11:33] 2026-03-05 21:11:33,071 [wrapper] ==== wrapper stderr END ====
[2026-03-05 22:11:33]  *** Error codes and diagnostics ***
[2026-03-05 22:11:33]     "exeErrorCode": 0,
[2026-03-05 22:11:33]     "exeErrorDiag": "",
[2026-03-05 22:11:33]     "pilotErrorCode": 0,
[2026-03-05 22:11:33]     "pilotErrorDiag": "",
[2026-03-05 22:11:33]  *** Listing of results directory ***
[2026-03-05 22:11:33] total 619808
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc    584627 Mar  4 17:22 pilot3.tar.gz
[2026-03-05 22:11:33] -rwx------. 1 boinc boinc     36322 Mar  4 17:26 runpilot2-wrapper.sh
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc      5111 Mar  4 17:28 queuedata.json
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc       100 Mar  5 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 22:11:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 20:50 run_atlas
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc       105 Mar  5 20:50 job.xml
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc 443667679 Mar  5 20:50 EVNT.46701403._001050.pool.root.1
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc      6708 Mar  5 20:50 init_data.xml
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc     15845 Mar  5 20:50 start_atlas.sh
[2026-03-05 22:11:33] drwxrwx--x. 2 boinc boinc      4096 Mar  5 20:50 shared
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc    597944 Mar  5 20:50 input.tar.gz
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc         0 Mar  5 20:50 boinc_lockfile
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc      2559 Mar  5 20:50 pandaJob.out
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc    998528 Mar  5 20:51 agis_schedconf.cvmfs.json
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc   1521291 Mar  5 20:51 agis_ddmendpoints.agis.ALL.json
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc       445 Mar  5 20:51 workernode_map.json
[2026-03-05 22:11:33] drwx------. 5 boinc boinc      4096 Mar  5 20:51 pilot3
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc 185148274 Mar  5 22:10 HITS.48955010._002459.pool.root.1
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc       530 Mar  5 22:10 boinc_task_state.xml
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc      1031 Mar  5 22:10 memory_monitor_summary.json
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc    264713 Mar  5 22:10 log.48955010._002459.job.log.tgz.1
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc      6355 Mar  5 22:11 heartbeat.json
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc      8192 Mar  5 22:11 boinc_mmap_file
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc        27 Mar  5 22:11 wrapper_checkpoint.txt
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc        95 Mar  5 22:11 pilot_heartbeat.json
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc       823 Mar  5 22:11 pilotlog.txt
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc    703064 Mar  5 22:11 log.48955010._002459.job.log.1
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc       357 Mar  5 22:11 output.list
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc       620 Mar  5 22:11 runtime_log
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc    983040 Mar  5 22:11 result.tar.gz
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc      9221 Mar  5 22:11 runtime_log.err
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc       662 Mar  5 22:11 BjXKDmwE4H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDyKLDmBXdKQo.diag
[2026-03-05 22:11:33] -rw-r--r--. 1 boinc boinc     22490 Mar  5 22:11 stderr.txt
[2026-03-05 22:11:33] HITS file was successfully produced:
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc 185148274 Mar  5 22:10 shared/HITS.pool.root.1
[2026-03-05 22:11:33]  *** Contents of shared directory: ***
[2026-03-05 22:11:33] total 615652
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc 443667679 Mar  5 20:50 ATLAS.root_0
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc     15845 Mar  5 20:50 start_atlas.sh
[2026-03-05 22:11:33] -rw-r--r--. 2 boinc boinc    597944 Mar  5 20:50 input.tar.gz
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc 185148274 Mar  5 22:10 HITS.pool.root.1
[2026-03-05 22:11:33] -rw-------. 1 boinc boinc    983040 Mar  5 22:11 result.tar.gz
22:11:34 (1782351): run_atlas exited; CPU time 18353.256368
22:11:34 (1782351): called boinc_finish(0)

</stderr_txt>
]]>

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