Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:59:59 (2997451): wrapper (7.7.26015): starting
04:59:59 (2997451): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 04:59:59] Arguments: --nthreads 4
[2026-03-05 04:59:59] Threads: 4
[2026-03-05 04:59:59] Checking for CVMFS
[2026-03-05 04:59:59] No cvmfs_config command found, will try listing directly
[2026-03-05 04:59:59] CVMFS is ok
[2026-03-05 04:59:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 04:59:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 04:59:59] Further information can be found at the LHC@home message board.
[2026-03-05 04:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 04:59:59] Checking for apptainer binary...
[2026-03-05 04:59:59] which: no apptainer in ((null))
[2026-03-05 04:59:59] apptainer is not installed, using version from CVMFS
[2026-03-05 04:59:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 04:59:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-05 04:59:59] apptainer works
[2026-03-05 04:59:59] Set ATHENA_PROC_NUMBER=4
[2026-03-05 04:59:59] Set ATHENA_CORE_NUMBER=4
[2026-03-05 04:59:59] Starting ATLAS job with PandaID=7038523948
[2026-03-05 04:59:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 06:18:26]  *** The last 200 lines of the pilot log: ***
[2026-03-05 06:18:26]  filetype=log
[2026-03-05 06:18:26]  guid=69971745-9cec-45e6-9e7a-f2f5bf65707e
[2026-03-05 06:18:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 06:18:26]  is_altstaged=None
[2026-03-05 06:18:26]  is_tar=False
[2026-03-05 06:18:26]  lfn=log.48955015._001707.job.log.tgz.1
[2026-03-05 06:18:26]  mtime=0
[2026-03-05 06:18:26]  protocol_id=None
[2026-03-05 06:18:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 06:18:26]  replicas=None
[2026-03-05 06:18:26]  scope=mc23_13p6TeV
[2026-03-05 06:18:26]  status=None
[2026-03-05 06:18:26]  status_code=0
[2026-03-05 06:18:26]  storage_token=
[2026-03-05 06:18:26]  surl=/var/lib/boinc/var/slot84/slots/2/PanDA_Pilot-7038523948/log.48955015._001707.job.log.tgz.1
[2026-03-05 06:18:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/5b/log.48955015._001707.job.log.tgz.1
[2026-03-05 06:18:26]  workdir=None
[2026-03-05 06:18:26] ]
[2026-03-05 06:18:26] 2026-03-05 05:17:36,683 | INFO     | transferring file log.48955015._001707.job.log.tgz.1 from /var/lib/boinc/var/slot84/slots/2/PanDA_Pilot-7038523948/log.48955015._001707.job.log.tgz.1 to /var/lib/b
[2026-03-05 06:18:26] 2026-03-05 05:17:36,683 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot84/slots/2/PanDA_Pilot-7038523948/log.48955015._001707.job.log.tgz.1 /var/lib/boinc/var/slot84/slots/2/lo
[2026-03-05 06:18:26] 2026-03-05 05:17:36,699 | INFO     | adding to output.list: log.48955015._001707.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/5b/log.48955015._001707.job.log.tg
[2026-03-05 06:18:26] 2026-03-05 05:17:36,700 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 06:18:26] 2026-03-05 05:17:36,700 | INFO     | summary of transferred files:
[2026-03-05 06:18:26] 2026-03-05 05:17:36,700 | INFO     |  -- lfn=log.48955015._001707.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 06:18:26] 2026-03-05 05:17:36,700 | INFO     | stage-out finished correctly
[2026-03-05 06:18:26] 2026-03-05 05:17:37,408 | INFO     | time since job start (4645s) is within the limit (349056.0s)
[2026-03-05 06:18:26] 2026-03-05 05:17:38,527 | INFO     | monitor loop #338: job 0:7038523948 is in state 'finished'
[2026-03-05 06:18:26] 2026-03-05 05:17:38,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,021 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 06:18:26] 2026-03-05 05:17:39,069 | INFO     | job 7038523948 has state=finished
[2026-03-05 06:18:26] 2026-03-05 05:17:39,070 | INFO     | preparing for final server update for job 7038523948 in state='finished'
[2026-03-05 06:18:26] 2026-03-05 05:17:39,070 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/2/PanDA_Pilot-7038523948/jobReport.json
[2026-03-05 06:18:26] 2026-03-05 05:17:39,072 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/2/workernode_map.json
[2026-03-05 06:18:26] 2026-03-05 05:17:39,072 | INFO     | this job has now completed (state=finished)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,072 | INFO     | log transfer has been attempted: DONE
[2026-03-05 06:18:26] 2026-03-05 05:17:39,072 | INFO     | job 7038523948 has finished - writing final server update
[2026-03-05 06:18:26] 2026-03-05 05:17:39,073 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3965509/.job.ad'
[2026-03-05 06:18:26] 2026-03-05 05:17:39,073 | INFO     | total number of processed events: 400 (read)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | INFO     | using path: /var/lib/boinc/var/slot84/slots/2/PanDA_Pilot-7038523948/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | INFO     | extracted standard info from prmon json
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 06:18:26] 2026-03-05 05:17:39,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 06:18:26] 2026-03-05 05:17:39,093 | INFO     | fitting pss+swap vs Time
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | sum of square deviations: 101843770.0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | sum of deviations: 172278518.00000006
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | mean x: 1772685613.0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | mean y: 2323663.782608696
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | intersect: -2996344298.799311
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | chi2: 9.158529900883145e-05
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | current memory leak: 1.69 B/s (using 69 data points, chi2=0.00)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | could have reported an average CPU frequency of 3575 MHz (6 samples)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | ..............................
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . Timing measurements:
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . get job = 0 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . initial setup = 5 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . payload setup = 5 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . stage-in = 0 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . payload execution = 4623 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . stage-out = 0 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | . log creation = 0 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,094 | INFO     | ..............................
[2026-03-05 06:18:26] 2026-03-05 05:17:39,145 | INFO     | 
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | job summary report
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | --------------------------------------------------
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | PanDA job id: 7038523948
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | task id: 48955015
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | errors: (none)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | pilot state: finished 
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | transexitcode: 0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | exeerrorcode: 0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | exeerrordiag: 
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | exitcode: 0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | exitmsg: OK
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | cpuconsumptiontime: 17733 s
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | nevents: 400
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | neventsw: 0
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | pid: 3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | pgrp: 3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | corecount: 4
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | event service: False
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | sizes: {0: 2295765, 11: 2295765, 4632: 2331038, 4635: 2331232}
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | --------------------------------------------------
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | 
[2026-03-05 06:18:26] 2026-03-05 05:17:39,146 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/2
[2026-03-05 06:18:26] 2026-03-05 05:17:39,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | job 7038523948 has completed (purged errors)
[2026-03-05 06:18:26] 2026-03-05 05:17:39,165 | INFO     | overall cleanup function is called
[2026-03-05 06:18:26] 2026-03-05 05:17:40,172 | INFO     | --- collectZombieJob: --- 10, [3008117]
[2026-03-05 06:18:26] 2026-03-05 05:17:40,172 | INFO     | zombie collector waiting for pid 3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:40,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 06:18:26] 2026-03-05 05:17:40,172 | INFO     | collected zombie processes
[2026-03-05 06:18:26] 2026-03-05 05:17:40,172 | INFO     | will attempt to kill all subprocesses of pid=3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:40,695 | INFO     | process IDs to be killed: [3008117] (in reverse order)
[2026-03-05 06:18:26] 2026-03-05 05:17:40,904 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 06:18:26] 2026-03-05 05:17:40,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 06:18:26] 2026-03-05 05:17:40,934 | INFO     | did not find any defunct processes belonging to 3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:40,962 | INFO     | did not find any defunct processes belonging to 3008117
[2026-03-05 06:18:26] 2026-03-05 05:17:40,962 | INFO     | ready for new job
[2026-03-05 06:18:26] 2026-03-05 05:17:40,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 06:18:26] 2026-03-05 05:17:40,963 | INFO     | **************************************
[2026-03-05 06:18:26] 2026-03-05 05:17:40,964 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 06:18:26] 2026-03-05 05:17:40,964 | INFO     | **************************************
[2026-03-05 06:18:26] 2026-03-05 05:17:40,964 | INFO     | 
[2026-03-05 06:18:26] 2026-03-05 05:17:40,971 | INFO     | architecture information:
[2026-03-05 06:18:26] 2026-03-05 05:17:40,971 | INFO     | executing command: cat /etc/os-release
[2026-03-05 06:18:26] 2026-03-05 05:17:40,987 | INFO     | cat /etc/os-release:
[2026-03-05 06:18:26] NAME="CentOS Linux"
[2026-03-05 06:18:26] VERSION="7 (Core)"
[2026-03-05 06:18:26] ID="centos"
[2026-03-05 06:18:26] ID_LIKE="rhel fedora"
[2026-03-05 06:18:26] VERSION_ID="7"
[2026-03-05 06:18:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 06:18:26] ANSI_COLOR="0;31"
[2026-03-05 06:18:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 06:18:26] HOME_URL="https://www.centos.org/"
[2026-03-05 06:18:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 06:18:26] 
[2026-03-05 06:18:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 06:18:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 06:18:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 06:18:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 06:18:26] 
[2026-03-05 06:18:26] 2026-03-05 05:17:40,988 | INFO     | **************************************
[2026-03-05 06:18:26] 2026-03-05 05:17:41,490 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/2
[2026-03-05 06:18:26] 2026-03-05 05:17:41,503 | INFO     | sufficient remaining disk space (19780337664 B)
[2026-03-05 06:18:26] 2026-03-05 05:17:41,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 06:18:26] 2026-03-05 05:17:41,504 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 06:18:26] 2026-03-05 05:17:41,504 | INFO     | update_server=False
[2026-03-05 06:18:26] 2026-03-05 05:17:41,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 06:18:26] 2026-03-05 05:17:41,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 06:18:26] 2026-03-05 05:17:41,516 | INFO     | job.realtimelogging is not enabled
[2026-03-05 06:18:26] 2026-03-05 05:17:41,620 | INFO     | all job control threads have been joined
[2026-03-05 06:18:26] 2026-03-05 05:17:41,917 | INFO     | all payload control threads have been joined
[2026-03-05 06:18:26] 2026-03-05 05:17:41,921 | INFO     | all data control threads have been joined
[2026-03-05 06:18:26] 2026-03-05 05:17:42,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 06:18:26] 2026-03-05 05:17:42,035 | INFO     | aborting loop
[2026-03-05 06:18:26] 2026-03-05 05:17:42,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 06:18:26] 2026-03-05 05:17:42,504 | INFO     | [job] retrieve thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,521 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,625 | INFO     | [job] control thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,633 | INFO     | [payload] failed_post thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,671 | INFO     | [job] validate thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,769 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,801 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,924 | INFO     | [payload] control thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:42,926 | INFO     | [data] control thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:43,040 | INFO     | [job] job monitor thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:43,160 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:43,180 | INFO     | [data] copytool_in thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:43,605 | INFO     | [payload] validate_post thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:44,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 06:18:26] 2026-03-05 05:17:44,264 | INFO     | [data] copytool_out thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:45,160 | INFO     | [job] queue monitor thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:17:45,509 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 06:18:26] 2026-03-05 05:18:11,009 | INFO     | PID=3002274 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 06:18:26] 2026-03-05 05:18:11,009 | INFO     | .. there are 46 such processes running
[2026-03-05 06:18:26] 2026-03-05 05:18:11,012 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 06:18:26] 2026-03-05 05:18:11,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 06:18:26] 2026-03-05 05:18:11,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 06:18:26] 2026-03-05 05:18:19,978 | INFO     | [monitor] cgroup control has ended
[2026-03-05 06:18:26] 2026-03-05 05:18:20,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22393180407616)>', '<ExcThread(monitor, started 22392941590272)>']
[2026-03-05 06:18:26] 2026-03-05 05:18:21,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 06:18:26] 2026-03-05 05:18:21,062 | INFO     | [monitor] control thread has ended
[2026-03-05 06:18:26] 2026-03-05 05:18:26,009 | INFO     | all workflow threads have been joined
[2026-03-05 06:18:26] 2026-03-05 05:18:26,009 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 06:18:26] 2026-03-05 05:18:26,009 | INFO     | traces error code: 0
[2026-03-05 06:18:26] 2026-03-05 05:18:26,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 06:18:26] 2026-03-05 05:18:26,202 [wrapper] ==== pilot stdout END ====
[2026-03-05 06:18:26] 2026-03-05 05:18:26,204 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 06:18:26] 2026-03-05 05:18:26,205 [wrapper] pilotpid: 3002274
[2026-03-05 06:18:26] 2026-03-05 05:18:26,207 [wrapper] Pilot exit status: 0
[2026-03-05 06:18:26] 2026-03-05 05:18:26,214 [wrapper] pandaids: 7038523948
[2026-03-05 06:18:26] 2026-03-05 05:18:26,337 [wrapper] cleanup supervisor_pilot 3684345 3002275
[2026-03-05 06:18:26] 2026-03-05 05:18:26,340 [wrapper] Test setup, not cleaning
[2026-03-05 06:18:26] 2026-03-05 05:18:26,342 [wrapper] apfmon messages muted
[2026-03-05 06:18:26] 2026-03-05 05:18:26,345 [wrapper] ==== wrapper stdout END ====
[2026-03-05 06:18:26] 2026-03-05 05:18:26,348 [wrapper] ==== wrapper stderr END ====
[2026-03-05 06:18:26]  *** Error codes and diagnostics ***
[2026-03-05 06:18:26]     "exeErrorCode": 0,
[2026-03-05 06:18:26]     "exeErrorDiag": "",
[2026-03-05 06:18:26]     "pilotErrorCode": 0,
[2026-03-05 06:18:26]     "pilotErrorDiag": "",
[2026-03-05 06:18:26]  *** Listing of results directory ***
[2026-03-05 06:18:26] total 608136
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc    584627 Mar  4 23:45 pilot3.tar.gz
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc      5111 Mar  4 23:45 queuedata.json
[2026-03-05 06:18:26] -rwx------. 1 boinc boinc     36322 Mar  4 23:45 runpilot2-wrapper.sh
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc       100 Mar  5 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 06:18:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 04:59 run_atlas
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc       105 Mar  5 04:59 job.xml
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:59 start_atlas.sh
[2026-03-05 06:18:26] drwxrwx--x. 2 boinc boinc      4096 Mar  5 04:59 shared
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc    597953 Mar  5 04:59 input.tar.gz
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc      6704 Mar  5 04:59 init_data.xml
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc 436840937 Mar  5 04:59 EVNT.46701403._002078.pool.root.1
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc         0 Mar  5 04:59 boinc_lockfile
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc      2567 Mar  5 04:59 pandaJob.out
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc    997757 Mar  5 05:00 agis_schedconf.cvmfs.json
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc   1521291 Mar  5 05:00 agis_ddmendpoints.agis.ALL.json
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc       444 Mar  5 05:00 workernode_map.json
[2026-03-05 06:18:26] drwx------. 5 boinc boinc      4096 Mar  5 05:00 pilot3
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc 180079314 Mar  5 06:17 HITS.48955015._001707.pool.root.1
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc       530 Mar  5 06:17 boinc_task_state.xml
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc      1031 Mar  5 06:17 memory_monitor_summary.json
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc    255422 Mar  5 06:17 log.48955015._001707.job.log.tgz.1
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc      6351 Mar  5 06:17 heartbeat.json
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc        95 Mar  5 06:18 pilot_heartbeat.json
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc      8192 Mar  5 06:18 boinc_mmap_file
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc        27 Mar  5 06:18 wrapper_checkpoint.txt
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc      4901 Mar  5 06:18 pilotlog.txt
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc    683639 Mar  5 06:18 log.48955015._001707.job.log.1
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc       357 Mar  5 06:18 output.list
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc       620 Mar  5 06:18 runtime_log
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc    952320 Mar  5 06:18 result.tar.gz
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc      9204 Mar  5 06:18 runtime_log.err
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc       662 Mar  5 06:18 5JZLDmI99H9n9Rq4apOajLDm4fhM0noT9bVooX4SDm60JLDm25Idbn.diag
[2026-03-05 06:18:26] -rw-r--r--. 1 boinc boinc     21117 Mar  5 06:18 stderr.txt
[2026-03-05 06:18:26] HITS file was successfully produced:
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc 180079314 Mar  5 06:17 shared/HITS.pool.root.1
[2026-03-05 06:18:26]  *** Contents of shared directory: ***
[2026-03-05 06:18:26] total 604004
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:59 start_atlas.sh
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc    597953 Mar  5 04:59 input.tar.gz
[2026-03-05 06:18:26] -rw-r--r--. 2 boinc boinc 436840937 Mar  5 04:59 ATLAS.root_0
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc 180079314 Mar  5 06:17 HITS.pool.root.1
[2026-03-05 06:18:26] -rw-------. 1 boinc boinc    952320 Mar  5 06:18 result.tar.gz
06:18:27 (2997451): run_atlas exited; CPU time 17920.516726
06:18:27 (2997451): called boinc_finish(0)

</stderr_txt>
]]>

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