Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-07 05:10:36 (3668): vboxwrapper version 26210
2026-03-07 05:10:36 (3668): BOINC client version: 8.0.2
2026-03-07 05:10:38 (3668): Detected: VirtualBox VboxManage Interface (Version: 6.1.28)
2026-03-07 05:10:38 (3668): Successfully copied 'init_data.xml' to the shared directory.
2026-03-07 05:10:38 (3668): Create VM. (boinc_0a6432d50bdb85d9, slot#0)
2026-03-07 05:10:39 (3668): Setting Memory Size for VM. (5400MB)
2026-03-07 05:10:39 (3668): Setting CPU Count for VM. (2)
2026-03-07 05:10:39 (3668): Setting Chipset Options for VM.
2026-03-07 05:10:39 (3668): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-07 05:10:40 (3668): Setting Boot Options for VM.
2026-03-07 05:10:40 (3668): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-07 05:10:41 (3668): Enabling VM Network Access.
2026-03-07 05:10:41 (3668): Disabling USB Support for VM.
2026-03-07 05:10:41 (3668): Disabling COM Port Support for VM.
2026-03-07 05:10:41 (3668): Disabling LPT Port Support for VM.
2026-03-07 05:10:42 (3668): Disabling Audio Support for VM.
2026-03-07 05:10:42 (3668): Disabling Clipboard Support for VM.
2026-03-07 05:10:42 (3668): Disabling Drag and Drop Support for VM.
2026-03-07 05:10:43 (3668): Adding storage controller(s) to VM.
2026-03-07 05:10:43 (3668): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-07 05:10:44 (3668): Adding VirtualBox Guest Additions to VM.
2026-03-07 05:10:44 (3668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-07 05:10:45 (3668): forwarding host port 49736 to guest port 80
2026-03-07 05:10:45 (3668): Enabling remote desktop for VM.
2026-03-07 05:10:45 (3668): Enabling shared directory for VM.
2026-03-07 05:10:46 (3668): Starting VM using VBoxManage interface. (boinc_0a6432d50bdb85d9, slot#0)
2026-03-07 05:10:52 (3668): Successfully started VM. (PID = '9708')
2026-03-07 05:10:52 (3668): Reporting VM Process ID to BOINC.
2026-03-07 05:10:52 (3668): Guest Log: BIOS: VirtualBox 6.1.28
2026-03-07 05:10:52 (3668): Guest Log: CPUID EDX: 0x178bfbff
2026-03-07 05:10:52 (3668): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-07 05:10:52 (3668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-07 05:10:52 (3668): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-07 05:10:52 (3668): Detected: Web Application Enabled (http://localhost:49736)
2026-03-07 05:10:52 (3668): Detected: Remote Desktop Enabled (localhost:49737)
2026-03-07 05:10:52 (3668): Preference change detected
2026-03-07 05:10:52 (3668): Setting CPU throttle for VM. (100%)
2026-03-07 05:10:53 (3668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 05:10:54 (3668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-07 05:10:54 (3668): Guest Log: BIOS: Booting from Hard Disk...
2026-03-07 05:10:57 (3668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-07 05:10:57 (3668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-07 05:10:57 (3668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-07 05:11:03 (3668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-07 05:11:03 (3668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-07 05:11:18 (3668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000397 main     Log opened 2026-03-07T05:11:16.611888000Z
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000528 main     OS Product: Linux
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000578 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000621 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000663 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000665 main     Process ID: 1308
2026-03-07 05:11:18 (3668): Guest Log: 00:00:00.000666 main     Package type: LINUX_64BITS_GENERIC
2026-03-07 05:11:19 (3668): Guest Log: 00:00:00.004927 main     5.2.32 r132073 started. Verbose level = 0
2026-03-07 05:11:19 (3668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-07 05:11:19 (3668): Guest Log: [INFO] Mounting shared directory
2026-03-07 05:11:19 (3668): Guest Log: [INFO] Checking for init_data.xml
2026-03-07 05:11:24 (3668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-07 05:11:24 (3668): Guest Log: [INFO] Detected branch: prod
2026-03-07 05:11:24 (3668): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-07 05:11:24 (3668): Guest Log: Copying input files
2026-03-07 05:11:26 (3668): Guest Log: Copied input files into RunAtlas.
2026-03-07 05:11:26 (3668): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2026-03-07 05:11:28 (3668): Guest Log: 00:00:10.009908 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 905 206 000ns (GuestNow=1 772 856 688 714 510 000 ns GuestLast=1 772 860 276 619 716 000 ns fSetTimeLastLoop=true )
2026-03-07 05:11:35 (3668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-07 05:11:35 (3668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-07 05:11:35 (3668): Guest Log: 2.6.3.0 1583 0 29592 156985 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2026-03-07 05:11:37 (3668): Guest Log: copied the webapp to /var/www
2026-03-07 05:11:37 (3668): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-07 05:11:37 (3668): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-07 05:11:37 (3668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-07 05:11:37 (3668): Guest Log:  *** Starting ATLAS job. (PandaID=7041085159 taskID=48844866) ***
2026-03-07 06:50:58 (3668): Status Report: Elapsed Time: '6000.000000'
2026-03-07 06:50:58 (3668): Status Report: CPU Time: '11122.500000'
2026-03-07 08:31:05 (3668): Status Report: Elapsed Time: '12000.000000'
2026-03-07 08:31:05 (3668): Status Report: CPU Time: '23064.359375'
2026-03-07 10:11:16 (3668): Status Report: Elapsed Time: '18000.691986'
2026-03-07 10:11:16 (3668): Status Report: CPU Time: '35004.796875'
2026-03-07 11:51:22 (3668): Status Report: Elapsed Time: '24000.691986'
2026-03-07 11:51:22 (3668): Status Report: CPU Time: '46950.531250'
2026-03-07 13:31:30 (3668): Status Report: Elapsed Time: '30000.741564'
2026-03-07 13:31:30 (3668): Status Report: CPU Time: '58878.703125'
2026-03-07 15:11:36 (3668): Status Report: Elapsed Time: '36000.741564'
2026-03-07 15:11:36 (3668): Status Report: CPU Time: '70822.968750'
2026-03-07 16:51:47 (3668): Status Report: Elapsed Time: '42000.741564'
2026-03-07 16:51:47 (3668): Status Report: CPU Time: '82765.968750'
2026-03-07 18:31:53 (3668): Status Report: Elapsed Time: '48000.741564'
2026-03-07 18:31:53 (3668): Status Report: CPU Time: '94707.562500'
2026-03-07 20:11:59 (3668): Status Report: Elapsed Time: '54000.741564'
2026-03-07 20:11:59 (3668): Status Report: CPU Time: '106648.500000'
2026-03-07 21:01:01 (3668): Guest Log:  *** Job finished ***
2026-03-07 21:01:01 (3668): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:40,917 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:40,918 | INFO     | traces error code: 0
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:40,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,356 | INFO     | PID=5963 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,357 | INFO     | found 0 job(s) in 20 queues
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,358 | CRITICAL | thread 'MainThread' is not alive
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,358 | INFO     | [monitor] control thread has ended
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,494 [wrapper] ==== pilot stdout END ====
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,500 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,506 [wrapper] pilotpid: 5963
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,512 [wrapper] Pilot exit status: 0
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,550 [wrapper] pandaids: 7041085159
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,590 [wrapper] cleanup supervisor_pilot  8820 5964
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,599 [wrapper] Test setup, not cleaning
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,605 [wrapper] apfmon messages muted
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,612 [wrapper] ==== wrapper stdout END ====
2026-03-07 21:01:01 (3668): Guest Log: 2026-03-07 20:00:56,619 [wrapper] ==== wrapper stderr END ====
2026-03-07 21:01:01 (3668): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 21:01:01 (3668): Guest Log:     "exeErrorCode": 0,
2026-03-07 21:01:01 (3668): Guest Log:     "exeErrorDiag": "",
2026-03-07 21:01:01 (3668): Guest Log:     "pilotErrorCode": 0,
2026-03-07 21:01:01 (3668): Guest Log:     "pilotErrorDiag": "",
2026-03-07 21:01:01 (3668): Guest Log:  *** Listing of results directory ***
2026-03-07 21:01:01 (3668): Guest Log: total 157636
2026-03-07 21:01:01 (3668): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  5 02:30 pilot3.tar.gz
2026-03-07 21:01:01 (3668): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  5 02:30 runpilot2-wrapper.sh
2026-03-07 21:01:01 (3668): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  5 02:30 queuedata.json
2026-03-07 21:01:01 (3668): Guest Log: -rwxr-xr-x. 1 atlas atlas     10971 Mar  7 04:11 init_data.xml
2026-03-07 21:01:01 (3668): Guest Log: -rwxr-xr-x. 1 atlas atlas    598001 Mar  7 04:11 input.tar.gz
2026-03-07 21:01:01 (3668): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 04:11 start_atlas.sh
2026-03-07 21:01:01 (3668): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 04:11 EVNT.48454474._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 21:01:01 (3668): Guest Log: -rw-r--r--. 1 atlas atlas      2690 Mar  7 04:11 pandaJob.out
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas        49 Mar  7 04:11 setup.sh.local
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas    999155 Mar  7 04:12 agis_schedconf.cvmfs.json
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas       427 Mar  7 04:12 workernode_map.json
2026-03-07 21:01:01 (3668): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 04:12 pilot3
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas 140076671 Mar  7 19:59 HITS.48844866._000080.pool.root.1
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  7 20:00 memory_monitor_summary.json
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 20:00 agis_ddmendpoints.agis.ALL.json
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas    959157 Mar  7 20:00 log.48844866._000080.job.log.tgz.1
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas      6366 Mar  7 20:00 heartbeat.json
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas       814 Mar  7 20:00 pilotlog.txt
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas        95 Mar  7 20:00 pilot_heartbeat.json
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas   7774092 Mar  7 20:00 log.48844866._000080.job.log.1
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 20:00 output.list
2026-03-07 21:01:01 (3668): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 20:00 runtime_log
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas   8755200 Mar  7 20:00 result.tar.gz
2026-03-07 21:01:01 (3668): Guest Log: -rw-r--r--. 1 atlas atlas      9224 Mar  7 20:00 runtime_log.err
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas       657 Mar  7 20:00 0PMNDmbeDI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOaMLDmhVLavn.diag
2026-03-07 21:01:01 (3668): Guest Log: Looking for outputfile HITS.48844866._000080.pool.root.1
2026-03-07 21:01:01 (3668): Guest Log: HITS file was successfully produced
2026-03-07 21:01:01 (3668): Guest Log: -rw-------. 1 atlas atlas 140076671 Mar  7 19:59 /home/atlas/RunAtlas/HITS.48844866._000080.pool.root.1
2026-03-07 21:01:03 (3668): Guest Log: Successfully finished the ATLAS job!
2026-03-07 21:01:03 (3668): Guest Log: Copying the results back to the shared directory!
2026-03-07 21:01:03 (3668): Guest Log:  *** Contents of shared directory: ***
2026-03-07 21:01:03 (3668): Guest Log: total 341876
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root 200615100 Mar  7 04:10 ATLAS.root_0
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root 140076671 Mar  7 20:01 HITS.pool.root.1
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root     10971 Mar  7 04:10 init_data.xml
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root    598001 Mar  5 06:29 input.tar.gz
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root   8755200 Mar  7 20:01 result.tar.gz
2026-03-07 21:01:03 (3668): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 06:29 start_atlas.sh
2026-03-07 21:01:03 (3668): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 21:01:03 (3668): VM Completion File Detected.
2026-03-07 21:01:03 (3668): Powering off VM.
2026-03-07 21:01:04 (3668): Successfully stopped VM.
2026-03-07 21:01:04 (3668): Deregistering VM. (boinc_0a6432d50bdb85d9, slot#0)
2026-03-07 21:01:04 (3668): Removing network bandwidth throttle group from VM.
2026-03-07 21:01:04 (3668): Removing VM from VirtualBox.
2026-03-07 21:01:09 (3668): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN