Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:06 (12819): wrapper (7.7.26015): starting
10:45:06 (12819): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 10:45:06] Arguments: --nthreads 8
[2026-03-05 10:45:06] Threads: 8
[2026-03-05 10:45:06] Checking for CVMFS
[2026-03-05 10:45:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 10:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 10:45:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 10:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 10:45:11] 2.11.2.0 18638 114429 135944 156914 3 53 24339221 25165825 96 130560 153 30338518 99.788 26453033 903 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-05 10:45:11] CVMFS is ok
[2026-03-05 10:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 10:45:11] Checking for apptainer binary...
[2026-03-05 10:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 10:45:11] Running /usr/bin/apptainer --version
[2026-03-05 10:45:11] apptainer version 1.3.2-1.el7
[2026-03-05 10:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 10:45:31] cg-vwn409.simple-grid.lan
[2026-03-05 10:45:31] apptainer works
[2026-03-05 10:45:32] Set ATHENA_PROC_NUMBER=8
[2026-03-05 10:45:32] Set ATHENA_CORE_NUMBER=8
[2026-03-05 10:45:32] Starting ATLAS job with PandaID=7036184047
[2026-03-05 10:45:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 15:51:25]  *** The last 200 lines of the pilot log: ***
[2026-03-05 15:51:25] 2026-03-05 14:50:28,415 | INFO     | job 7036184047 has finished - writing final server update
[2026-03-05 15:51:25] 2026-03-05 14:50:28,416 | INFO     | total number of processed events: 400 (read)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,418 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7036184047/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,418 | INFO     | extracted standard info from prmon json
[2026-03-05 15:51:25] 2026-03-05 14:50:28,418 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 15:51:25] 2026-03-05 14:50:28,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 15:51:25] 2026-03-05 14:50:28,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 15:51:25] 2026-03-05 14:50:28,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 15:51:25] 2026-03-05 14:50:28,424 | INFO     | fitting pss+swap vs Time
[2026-03-05 15:51:25] 2026-03-05 14:50:28,425 | INFO     | sum of square deviations: 7484568240.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,427 | INFO     | sum of deviations: 175199905660.99997
[2026-03-05 15:51:25] 2026-03-05 14:50:28,428 | INFO     | mean x: 1772713373.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,428 | INFO     | mean y: 2456009.60899654
[2026-03-05 15:51:25] 2026-03-05 14:50:28,428 | INFO     | intersect: -41493486809.611404
[2026-03-05 15:51:25] 2026-03-05 14:50:28,428 | INFO     | chi2: 8.392346935191856
[2026-03-05 15:51:25] 2026-03-05 14:50:28,429 | INFO     | sum of square deviations: 7102775035.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,431 | INFO     | sum of deviations: 191171463985.99997
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | mean x: 1772713220.5
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | mean y: 2462279.8098591547
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | intersect: -47710182414.746735
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | chi2: 7.67474451336115
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | current chi2=7.67474451336115 (change=8.55067631703314 %)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,432 | INFO     | right removable region: 283
[2026-03-05 15:51:25] 2026-03-05 14:50:28,433 | INFO     | sum of square deviations: 7102775035.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | sum of deviations: 74655610548.00002
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | mean x: 1772713525.5
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | mean y: 2496144.7183098593
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | intersect: -18630081956.201378
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | chi2: 3.5638669238856178
[2026-03-05 15:51:25] 2026-03-05 14:50:28,436 | INFO     | current chi2=3.5638669238856178 (change=57.534323218441344 %)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,437 | INFO     | sum of square deviations: 6734191380.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,439 | INFO     | sum of deviations: -2198161596.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,440 | INFO     | mean x: 1772713678.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,440 | INFO     | mean y: 2527907.1146953404
[2026-03-05 15:51:25] 2026-03-05 14:50:28,440 | INFO     | intersect: 581173643.1501197
[2026-03-05 15:51:25] 2026-03-05 14:50:28,440 | INFO     | chi2: 0.9282689696960734
[2026-03-05 15:51:25] 2026-03-05 14:50:28,440 | INFO     | current chi2=0.9282689696960734 (change=73.9533212232291 %)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,441 | INFO     | sum of square deviations: 6378584712.5
[2026-03-05 15:51:25] 2026-03-05 14:50:28,443 | INFO     | sum of deviations: -15068404189.5
[2026-03-05 15:51:25] 2026-03-05 14:50:28,443 | INFO     | mean x: 1772713830.5
[2026-03-05 15:51:25] 2026-03-05 14:50:28,443 | INFO     | mean y: 2533395.091240876
[2026-03-05 15:51:25] 2026-03-05 14:50:28,444 | INFO     | intersect: 4190291293.4764137
[2026-03-05 15:51:25] 2026-03-05 14:50:28,444 | INFO     | chi2: 0.8328099042838666
[2026-03-05 15:51:25] 2026-03-05 14:50:28,444 | INFO     | current chi2=0.8328099042838666 (change=10.283556655293701 %)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,444 | INFO     | left removable region: 30
[2026-03-05 15:51:25] 2026-03-05 14:50:28,445 | INFO     | sum of square deviations: 5021496942.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,447 | INFO     | sum of deviations: 7672479716.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,447 | INFO     | mean x: 1772714105.0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,447 | INFO     | mean y: 2539459.6798418975
[2026-03-05 15:51:25] 2026-03-05 14:50:28,447 | INFO     | intersect: -2706037916.7433805
[2026-03-05 15:51:25] 2026-03-05 14:50:28,447 | INFO     | chi2: 0.002546037274295963
[2026-03-05 15:51:25] 2026-03-05 14:50:28,448 | INFO     | current memory leak: 1.53 B/s (using 253 data points, chi2=0.00)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,448 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,448 | INFO     | ..............................
[2026-03-05 15:51:25] 2026-03-05 14:50:28,448 | INFO     | . Timing measurements:
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . get job = 0 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . initial setup = 113 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . payload setup = 145 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . stage-in = 0 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . payload execution = 17754 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . stage-out = 4 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | . log creation = 1 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,449 | INFO     | ..............................
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | 
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | job summary report
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | --------------------------------------------------
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | PanDA job id: 7036184047
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | task id: 48838577
[2026-03-05 15:51:25] 2026-03-05 14:50:28,756 | INFO     | errors: (none)
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | pilot state: finished 
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | transexitcode: 0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | exeerrorcode: 0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | exeerrordiag: 
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | exitcode: 0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | exitmsg: OK
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | cpuconsumptiontime: 67133 s
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | nevents: 400
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | neventsw: 0
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | pid: 21244
[2026-03-05 15:51:25] 2026-03-05 14:50:28,757 | INFO     | pgrp: 21244
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | corecount: 8
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | event service: False
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | sizes: {0: 2295382, 1: 2295843, 12: 2295843, 17904: 2327995, 17905: 2327994, 17909: 2337048, 17911: 2337232, 17913: 2337426}
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | --------------------------------------------------
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | 
[2026-03-05 15:51:25] 2026-03-05 14:50:28,758 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-05 15:51:25] 2026-03-05 14:50:28,912 | INFO     | time since job start (17926s) is within the limit (349056.0s)
[2026-03-05 15:51:25] 2026-03-05 14:50:29,364 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,364 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | job 7036184047 has completed (purged errors)
[2026-03-05 15:51:25] 2026-03-05 14:50:29,366 | INFO     | overall cleanup function is called
[2026-03-05 15:51:25] 2026-03-05 14:50:30,375 | INFO     | --- collectZombieJob: --- 10, [21244]
[2026-03-05 15:51:25] 2026-03-05 14:50:30,375 | INFO     | zombie collector waiting for pid 21244
[2026-03-05 15:51:25] 2026-03-05 14:50:30,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 15:51:25] 2026-03-05 14:50:30,375 | INFO     | collected zombie processes
[2026-03-05 15:51:25] 2026-03-05 14:50:30,375 | INFO     | will attempt to kill all subprocesses of pid=21244
[2026-03-05 15:51:25] 2026-03-05 14:50:30,459 | INFO     | process IDs to be killed: [21244] (in reverse order)
[2026-03-05 15:51:25] 2026-03-05 14:50:31,484 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 15:51:25] 2026-03-05 14:50:31,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 15:51:25] 2026-03-05 14:50:31,487 | INFO     | did not find any defunct processes belonging to 21244
[2026-03-05 15:51:25] 2026-03-05 14:50:31,488 | INFO     | did not find any defunct processes belonging to 21244
[2026-03-05 15:51:25] 2026-03-05 14:50:31,489 | INFO     | ready for new job
[2026-03-05 15:51:25] 2026-03-05 14:50:31,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 15:51:25] 2026-03-05 14:50:31,491 | INFO     | **************************************
[2026-03-05 15:51:25] 2026-03-05 14:50:31,491 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 15:51:25] 2026-03-05 14:50:31,491 | INFO     | **************************************
[2026-03-05 15:51:25] 2026-03-05 14:50:31,491 | INFO     | 
[2026-03-05 15:51:25] 2026-03-05 14:50:31,492 | INFO     | pilot is running in a VM
[2026-03-05 15:51:25] 2026-03-05 14:50:31,492 | INFO     | architecture information:
[2026-03-05 15:51:25] 2026-03-05 14:50:31,502 | INFO     | executing command: cat /etc/os-release
[2026-03-05 15:51:25] 2026-03-05 14:50:31,901 | INFO     | cat /etc/os-release:
[2026-03-05 15:51:25] NAME="CentOS Linux"
[2026-03-05 15:51:25] VERSION="7 (Core)"
[2026-03-05 15:51:25] ID="centos"
[2026-03-05 15:51:25] ID_LIKE="rhel fedora"
[2026-03-05 15:51:25] VERSION_ID="7"
[2026-03-05 15:51:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 15:51:25] ANSI_COLOR="0;31"
[2026-03-05 15:51:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 15:51:25] HOME_URL="https://www.centos.org/"
[2026-03-05 15:51:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 15:51:25] 
[2026-03-05 15:51:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 15:51:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 15:51:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 15:51:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 15:51:25] 
[2026-03-05 15:51:25] 2026-03-05 14:50:31,902 | INFO     | **************************************
[2026-03-05 15:51:25] 2026-03-05 14:50:32,405 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-05 15:51:25] 2026-03-05 14:50:32,612 | INFO     | sufficient remaining disk space (495711158272 B)
[2026-03-05 15:51:25] 2026-03-05 14:50:32,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 15:51:25] 2026-03-05 14:50:32,613 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 15:51:25] 2026-03-05 14:50:32,613 | INFO     | update_server=False
[2026-03-05 15:51:25] 2026-03-05 14:50:32,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 15:51:25] 2026-03-05 14:50:32,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 15:51:25] 2026-03-05 14:50:32,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 15:51:25] 2026-03-05 14:50:32,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 15:51:25] 2026-03-05 14:50:32,619 | INFO     | aborting loop
[2026-03-05 15:51:25] 2026-03-05 14:50:32,724 | INFO     | all payload control threads have been joined
[2026-03-05 15:51:25] 2026-03-05 14:50:32,873 | INFO     | all job control threads have been joined
[2026-03-05 15:51:25] 2026-03-05 14:50:33,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 15:51:25] 2026-03-05 14:50:33,619 | INFO     | [job] retrieve thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,625 | INFO     | [job] job monitor thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,670 | INFO     | all data control threads have been joined
[2026-03-05 15:51:25] 2026-03-05 14:50:33,730 | INFO     | [payload] control thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,835 | INFO     | [payload] failed_post thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,879 | INFO     | [job] control thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,886 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,902 | INFO     | [job] validate thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:33,951 | INFO     | [payload] validate_post thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,397 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,618 | INFO     | [job] queue monitor thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,622 | INFO     | [data] copytool_out thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,676 | INFO     | [data] control thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,839 | INFO     | [data] copytool_in thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,897 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:34,921 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:50:36,623 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 15:51:25] 2026-03-05 14:51:02,043 | INFO     | PID=16789 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 15:51:25] 2026-03-05 14:51:02,043 | INFO     | .. there are 2 such processes running
[2026-03-05 15:51:25] 2026-03-05 14:51:02,044 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 15:51:25] 2026-03-05 14:51:02,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 15:51:25] 2026-03-05 14:51:02,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 15:51:25] 2026-03-05 14:51:12,923 | INFO     | [monitor] cgroup control has ended
[2026-03-05 15:51:25] 2026-03-05 14:51:14,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620689487680)>', '<ExcThread(monitor, started 140619972339456)>']
[2026-03-05 15:51:25] 2026-03-05 14:51:15,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 15:51:25] 2026-03-05 14:51:15,123 | INFO     | [monitor] control thread has ended
[2026-03-05 15:51:25] 2026-03-05 14:51:19,795 | INFO     | all workflow threads have been joined
[2026-03-05 15:51:25] 2026-03-05 14:51:19,795 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 15:51:25] 2026-03-05 14:51:19,795 | INFO     | traces error code: 0
[2026-03-05 15:51:25] 2026-03-05 14:51:19,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 15:51:25] 2026-03-05 14:51:20,308 [wrapper] ==== pilot stdout END ====
[2026-03-05 15:51:25] 2026-03-05 14:51:20,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 15:51:25] 2026-03-05 14:51:20,501 [wrapper] pilotpid: 16789
[2026-03-05 15:51:25] 2026-03-05 14:51:20,593 [wrapper] Pilot exit status: 0
[2026-03-05 15:51:25] 2026-03-05 14:51:21,024 [wrapper] pandaids: 7036184047
[2026-03-05 15:51:25] 2026-03-05 14:51:22,164 [wrapper] cleanup supervisor_pilot 27779 16790
[2026-03-05 15:51:25] 2026-03-05 14:51:22,279 [wrapper] Test setup, not cleaning
[2026-03-05 15:51:25] 2026-03-05 14:51:22,329 [wrapper] apfmon messages muted
[2026-03-05 15:51:25] 2026-03-05 14:51:22,462 [wrapper] ==== wrapper stdout END ====
[2026-03-05 15:51:25] 2026-03-05 14:51:22,600 [wrapper] ==== wrapper stderr END ====
[2026-03-05 15:51:25]  *** Error codes and diagnostics ***
[2026-03-05 15:51:25]     "exeErrorCode": 0,
[2026-03-05 15:51:25]     "exeErrorDiag": "",
[2026-03-05 15:51:25]     "pilotErrorCode": 0,
[2026-03-05 15:51:25]     "pilotErrorDiag": "",
[2026-03-05 15:51:25]  *** Listing of results directory ***
[2026-03-05 15:51:25] total 515320
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc      5111 Mar  3 04:05 queuedata.json
[2026-03-05 15:51:25] -rwx------. 1 boinc boinc     36322 Mar  3 04:06 runpilot2-wrapper.sh
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc       100 Mar  5 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 15:51:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 10:45 run_atlas
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc       105 Mar  5 10:45 job.xml
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc 289015663 Mar  5 10:45 EVNT.48220197._000106.pool.root.1
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc    597976 Mar  5 10:45 input.tar.gz
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc      6392 Mar  5 10:45 init_data.xml
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:45 start_atlas.sh
[2026-03-05 15:51:25] drwxrwx--x. 2 boinc boinc        68 Mar  5 10:45 shared
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc         0 Mar  5 10:45 boinc_lockfile
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc      2567 Mar  5 10:45 pandaJob.out
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc       415 Mar  5 10:51 workernode_map.json
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc    998505 Mar  5 10:51 agis_schedconf.cvmfs.json
[2026-03-05 15:51:25] drwx------. 5 boinc boinc      4096 Mar  5 10:51 pilot3
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc 228675946 Mar  5 15:48 HITS.48838577._002767.pool.root.1
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc       530 Mar  5 15:48 boinc_task_state.xml
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc      1012 Mar  5 15:50 memory_monitor_summary.json
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc   1521291 Mar  5 15:50 agis_ddmendpoints.agis.ALL.json
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc    507942 Mar  5 15:50 log.48838577._002767.job.log.tgz.1
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc      6316 Mar  5 15:50 heartbeat.json
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc        95 Mar  5 15:51 pilot_heartbeat.json
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc      8192 Mar  5 15:51 boinc_mmap_file
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc        28 Mar  5 15:51 wrapper_checkpoint.txt
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc      4880 Mar  5 15:51 pilotlog.txt
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc   2527726 Mar  5 15:51 log.48838577._002767.job.log.1
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc       357 Mar  5 15:51 output.list
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc       620 Mar  5 15:51 runtime_log
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc   3051520 Mar  5 15:51 result.tar.gz
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc      8816 Mar  5 15:51 runtime_log.err
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc       655 Mar  5 15:51 re5KDmoGVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtSFLDm9F8iOo.diag
[2026-03-05 15:51:25] -rw-r--r--. 1 boinc boinc     20730 Mar  5 15:51 stderr.txt
[2026-03-05 15:51:25] HITS file was successfully produced:
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc 228675946 Mar  5 15:48 shared/HITS.pool.root.1
[2026-03-05 15:51:25]  *** Contents of shared directory: ***
[2026-03-05 15:51:25] total 509144
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc 289015663 Mar  5 10:45 ATLAS.root_0
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc    597976 Mar  5 10:45 input.tar.gz
[2026-03-05 15:51:25] -rw-r--r--. 2 boinc boinc     15845 Mar  5 10:45 start_atlas.sh
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc 228675946 Mar  5 15:48 HITS.pool.root.1
[2026-03-05 15:51:25] -rw-------. 1 boinc boinc   3051520 Mar  5 15:51 result.tar.gz
15:51:27 (12819): run_atlas exited; CPU time 67329.233441
15:51:27 (12819): called boinc_finish(0)

</stderr_txt>
]]>

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