Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:16:05 (448056): wrapper (7.7.26015): starting
20:16:05 (448056): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 20:16:05] Arguments: --nthreads 4
[2026-03-05 20:16:05] Threads: 4
[2026-03-05 20:16:05] Checking for CVMFS
[2026-03-05 20:16:05] No cvmfs_config command found, will try listing directly
[2026-03-05 20:16:05] CVMFS is ok
[2026-03-05 20:16:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 20:16:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 20:16:05] Further information can be found at the LHC@home message board.
[2026-03-05 20:16:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 20:16:05] Checking for apptainer binary...
[2026-03-05 20:16:05] which: no apptainer in ((null))
[2026-03-05 20:16:05] apptainer is not installed, using version from CVMFS
[2026-03-05 20:16:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 20:16:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-05 20:16:05] apptainer works
[2026-03-05 20:16:05] Set ATHENA_PROC_NUMBER=4
[2026-03-05 20:16:05] Set ATHENA_CORE_NUMBER=4
[2026-03-05 20:16:05] Starting ATLAS job with PandaID=7040662698
[2026-03-05 20:16:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 23:37:58]  *** The last 200 lines of the pilot log: ***
[2026-03-05 23:37:58] 2026-03-05 22:37:18,095 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_14309/.job.ad'
[2026-03-05 23:37:58] 2026-03-05 22:37:18,095 | INFO     | total number of processed events: 400 (read)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,128 | INFO     | using path: /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7040662698/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,129 | INFO     | extracted standard info from prmon json
[2026-03-05 23:37:58] 2026-03-05 22:37:18,129 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 23:37:58] 2026-03-05 22:37:18,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 23:37:58] 2026-03-05 22:37:18,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 23:37:58] 2026-03-05 22:37:18,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 23:37:58] 2026-03-05 22:37:18,135 | INFO     | fitting pss+swap vs Time
[2026-03-05 23:37:58] 2026-03-05 22:37:18,135 | INFO     | sum of square deviations: 2370641658.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,136 | INFO     | sum of deviations: 22253627587.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,136 | INFO     | mean x: 1772744199.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,136 | INFO     | mean y: 2335484.5279187816
[2026-03-05 23:37:58] 2026-03-05 22:37:18,137 | INFO     | intersect: -16638724153.66419
[2026-03-05 23:37:58] 2026-03-05 22:37:18,137 | INFO     | chi2: 1.366838299443226
[2026-03-05 23:37:58] 2026-03-05 22:37:18,137 | INFO     | sum of square deviations: 2194675568.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,138 | INFO     | sum of deviations: 21609436263.5
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | mean x: 1772744046.5
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | mean y: 2334926.328125
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | intersect: -17452636570.552746
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | chi2: 1.367687068377646
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | current chi2=1.367687068377646 (change=-0.062097245501961565 %)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,139 | INFO     | right removable region: 191
[2026-03-05 23:37:58] 2026-03-05 22:37:18,140 | INFO     | sum of square deviations: 2194675568.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,141 | INFO     | sum of deviations: -3514156747.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,141 | INFO     | mean x: 1772744351.5
[2026-03-05 23:37:58] 2026-03-05 22:37:18,141 | INFO     | mean y: 2357527.96875
[2026-03-05 23:37:58] 2026-03-05 22:37:18,141 | INFO     | intersect: 2840909892.7754397
[2026-03-05 23:37:58] 2026-03-05 22:37:18,142 | INFO     | chi2: 0.00669668358961637
[2026-03-05 23:37:58] 2026-03-05 22:37:18,142 | INFO     | current chi2=0.00669668358961637 (change=99.51006029079342 %)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,142 | INFO     | sum of square deviations: 2027639878.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,143 | INFO     | sum of deviations: -4032381759.000001
[2026-03-05 23:37:58] 2026-03-05 22:37:18,143 | INFO     | mean x: 1772744504.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,143 | INFO     | mean y: 2357985.385026738
[2026-03-05 23:37:58] 2026-03-05 22:37:18,144 | INFO     | intersect: 3527827512.226274
[2026-03-05 23:37:58] 2026-03-05 22:37:18,144 | INFO     | chi2: 0.0037383924305509205
[2026-03-05 23:37:58] 2026-03-05 22:37:18,144 | INFO     | current chi2=0.0037383924305509205 (change=44.17546565366275 %)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,144 | INFO     | sum of square deviations: 1869302025.5
[2026-03-05 23:37:58] 2026-03-05 22:37:18,145 | INFO     | sum of deviations: -4105920675.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,145 | INFO     | mean x: 1772744656.5
[2026-03-05 23:37:58] 2026-03-05 22:37:18,146 | INFO     | mean y: 2358056.4835164836
[2026-03-05 23:37:58] 2026-03-05 22:37:18,146 | INFO     | intersect: 3896190533.700358
[2026-03-05 23:37:58] 2026-03-05 22:37:18,146 | INFO     | chi2: 0.003546137047782636
[2026-03-05 23:37:58] 2026-03-05 22:37:18,146 | INFO     | current chi2=0.003546137047782636 (change=5.142728762158131 %)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,146 | INFO     | left removable region: 30
[2026-03-05 23:37:58] 2026-03-05 22:37:18,147 | INFO     | sum of square deviations: 1294014960.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,147 | INFO     | sum of deviations: -3262048749.0000005
[2026-03-05 23:37:58] 2026-03-05 22:37:18,148 | INFO     | mean x: 1772744931.0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,148 | INFO     | mean y: 2357138.49689441
[2026-03-05 23:37:58] 2026-03-05 22:37:18,148 | INFO     | intersect: 4471223854.276319
[2026-03-05 23:37:58] 2026-03-05 22:37:18,148 | INFO     | chi2: 0.0032180160621541535
[2026-03-05 23:37:58] 2026-03-05 22:37:18,148 | INFO     | current memory leak: -2.52 B/s (using 161 data points, chi2=0.00)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | could have reported an average CPU frequency of 2720 MHz (10 samples)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | ..............................
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | . Timing measurements:
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | . get job = 0 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | . initial setup = 9 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,149 | INFO     | . payload setup = 10 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,150 | INFO     | . stage-in = 0 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,150 | INFO     | . payload execution = 12018 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,150 | INFO     | . stage-out = 1 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,150 | INFO     | . log creation = 0 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,150 | INFO     | ..............................
[2026-03-05 23:37:58] 2026-03-05 22:37:18,253 | INFO     | 
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | job summary report
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | --------------------------------------------------
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | PanDA job id: 7040662698
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | task id: 48838586
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | errors: (none)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | pilot state: finished 
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | transexitcode: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | exeerrorcode: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | exeerrordiag: 
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | exitcode: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | exitmsg: OK
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | cpuconsumptiontime: 45458 s
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | nevents: 400
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | neventsw: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,255 | INFO     | pid: 482670
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | pgrp: 482670
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | corecount: 4
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | event service: False
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | sizes: {0: 2294620, 1: 2295749, 12: 2295749, 12032: 2325780, 12034: 2334800, 12035: 2335178}
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | --------------------------------------------------
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | 
[2026-03-05 23:37:58] 2026-03-05 22:37:18,256 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/0
[2026-03-05 23:37:58] 2026-03-05 22:37:18,288 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,289 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,289 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,289 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 23:37:58] 2026-03-05 22:37:18,291 | INFO     | job 7040662698 has completed (purged errors)
[2026-03-05 23:37:58] 2026-03-05 22:37:18,292 | INFO     | overall cleanup function is called
[2026-03-05 23:37:58] 2026-03-05 22:37:18,658 | INFO     | PID=461851 has CPU usage=26.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 23:37:58] 2026-03-05 22:37:18,658 | INFO     | .. there are 23 such processes running
[2026-03-05 23:37:58] 2026-03-05 22:37:19,303 | INFO     | --- collectZombieJob: --- 10, [482670]
[2026-03-05 23:37:58] 2026-03-05 22:37:19,304 | INFO     | zombie collector waiting for pid 482670
[2026-03-05 23:37:58] 2026-03-05 22:37:19,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 23:37:58] 2026-03-05 22:37:19,304 | INFO     | collected zombie processes
[2026-03-05 23:37:58] 2026-03-05 22:37:19,304 | INFO     | will attempt to kill all subprocesses of pid=482670
[2026-03-05 23:37:58] 2026-03-05 22:37:20,121 | INFO     | process IDs to be killed: [482670] (in reverse order)
[2026-03-05 23:37:58] 2026-03-05 22:37:20,460 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 23:37:58] 2026-03-05 22:37:20,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 23:37:58] 2026-03-05 22:37:20,491 | INFO     | did not find any defunct processes belonging to 482670
[2026-03-05 23:37:58] 2026-03-05 22:37:20,517 | INFO     | did not find any defunct processes belonging to 482670
[2026-03-05 23:37:58] 2026-03-05 22:37:20,518 | INFO     | ready for new job
[2026-03-05 23:37:58] 2026-03-05 22:37:20,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 23:37:58] 2026-03-05 22:37:20,520 | INFO     | **************************************
[2026-03-05 23:37:58] 2026-03-05 22:37:20,520 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 23:37:58] 2026-03-05 22:37:20,520 | INFO     | **************************************
[2026-03-05 23:37:58] 2026-03-05 22:37:20,520 | INFO     | 
[2026-03-05 23:37:58] 2026-03-05 22:37:20,529 | INFO     | architecture information:
[2026-03-05 23:37:58] 2026-03-05 22:37:20,529 | INFO     | executing command: cat /etc/os-release
[2026-03-05 23:37:58] 2026-03-05 22:37:20,555 | INFO     | cat /etc/os-release:
[2026-03-05 23:37:58] NAME="CentOS Linux"
[2026-03-05 23:37:58] VERSION="7 (Core)"
[2026-03-05 23:37:58] ID="centos"
[2026-03-05 23:37:58] ID_LIKE="rhel fedora"
[2026-03-05 23:37:58] VERSION_ID="7"
[2026-03-05 23:37:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 23:37:58] ANSI_COLOR="0;31"
[2026-03-05 23:37:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 23:37:58] HOME_URL="https://www.centos.org/"
[2026-03-05 23:37:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 23:37:58] 
[2026-03-05 23:37:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 23:37:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 23:37:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 23:37:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 23:37:58] 
[2026-03-05 23:37:58] 2026-03-05 22:37:20,556 | INFO     | **************************************
[2026-03-05 23:37:58] 2026-03-05 22:37:21,062 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/0
[2026-03-05 23:37:58] 2026-03-05 22:37:21,090 | INFO     | sufficient remaining disk space (250861322240 B)
[2026-03-05 23:37:58] 2026-03-05 22:37:21,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 23:37:58] 2026-03-05 22:37:21,091 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 23:37:58] 2026-03-05 22:37:21,091 | INFO     | update_server=False
[2026-03-05 23:37:58] 2026-03-05 22:37:21,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 23:37:58] 2026-03-05 22:37:21,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 23:37:58] 2026-03-05 22:37:21,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 23:37:58] 2026-03-05 22:37:21,319 | INFO     | aborting loop
[2026-03-05 23:37:58] 2026-03-05 22:37:22,096 | INFO     | [job] retrieve thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,128 | INFO     | [payload] validate_post thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,195 | INFO     | all data control threads have been joined
[2026-03-05 23:37:58] 2026-03-05 22:37:22,275 | INFO     | [data] copytool_in thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,276 | INFO     | all job control threads have been joined
[2026-03-05 23:37:58] 2026-03-05 22:37:22,323 | INFO     | [job] job monitor thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,356 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,496 | INFO     | all payload control threads have been joined
[2026-03-05 23:37:58] 2026-03-05 22:37:22,650 | INFO     | [payload] failed_post thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:22,927 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,096 | INFO     | [data] copytool_out thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,126 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,194 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,200 | INFO     | [data] control thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 23:37:58] 2026-03-05 22:37:23,278 | INFO     | [job] control thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,501 | INFO     | [payload] control thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:23,590 | INFO     | [job] validate thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:24,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 23:37:58] 2026-03-05 22:37:24,267 | INFO     | [job] queue monitor thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:28,098 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 23:37:58] 2026-03-05 22:37:51,059 | INFO     | [monitor] cgroup control has ended
[2026-03-05 23:37:58] 2026-03-05 22:37:51,709 | INFO     | PID=461851 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 23:37:58] 2026-03-05 22:37:51,709 | INFO     | .. there are 24 such processes running
[2026-03-05 23:37:58] 2026-03-05 22:37:51,711 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 23:37:58] 2026-03-05 22:37:51,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 23:37:58] 2026-03-05 22:37:51,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 23:37:58] 2026-03-05 22:37:52,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22577321785152)>', '<ExcThread(monitor, started 22577073612544)>']
[2026-03-05 23:37:58] 2026-03-05 22:37:53,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 23:37:58] 2026-03-05 22:37:53,724 | INFO     | [monitor] control thread has ended
[2026-03-05 23:37:58] 2026-03-05 22:37:57,809 | INFO     | all workflow threads have been joined
[2026-03-05 23:37:58] 2026-03-05 22:37:57,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 23:37:58] 2026-03-05 22:37:57,810 | INFO     | traces error code: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:57,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 23:37:58] 2026-03-05 22:37:57,956 [wrapper] ==== pilot stdout END ====
[2026-03-05 23:37:58] 2026-03-05 22:37:57,960 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 23:37:58] 2026-03-05 22:37:57,964 [wrapper] pilotpid: 461851
[2026-03-05 23:37:58] 2026-03-05 22:37:57,968 [wrapper] Pilot exit status: 0
[2026-03-05 23:37:58] 2026-03-05 22:37:57,981 [wrapper] pandaids: 7040662698
[2026-03-05 23:37:58] 2026-03-05 22:37:58,196 [wrapper] cleanup supervisor_pilot  965679 461853
[2026-03-05 23:37:58] 2026-03-05 22:37:58,201 [wrapper] Test setup, not cleaning
[2026-03-05 23:37:58] 2026-03-05 22:37:58,205 [wrapper] apfmon messages muted
[2026-03-05 23:37:58] 2026-03-05 22:37:58,208 [wrapper] ==== wrapper stdout END ====
[2026-03-05 23:37:58] 2026-03-05 22:37:58,212 [wrapper] ==== wrapper stderr END ====
[2026-03-05 23:37:58]  *** Error codes and diagnostics ***
[2026-03-05 23:37:58]     "exeErrorCode": 0,
[2026-03-05 23:37:58]     "exeErrorDiag": "",
[2026-03-05 23:37:58]     "pilotErrorCode": 0,
[2026-03-05 23:37:58]     "pilotErrorDiag": "",
[2026-03-05 23:37:58]  *** Listing of results directory ***
[2026-03-05 23:37:58] total 485704
[2026-03-05 23:37:58] -rwx------. 1 boinc boinc     36322 Mar  4 21:09 runpilot2-wrapper.sh
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc    584627 Mar  4 21:10 pilot3.tar.gz
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc      5111 Mar  4 21:12 queuedata.json
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc       100 Mar  5 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 23:37:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 20:15 run_atlas
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc       105 Mar  5 20:15 job.xml
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc 275787990 Mar  5 20:16 EVNT.48220221._000216.pool.root.1
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc      6616 Mar  5 20:16 init_data.xml
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc     15845 Mar  5 20:16 start_atlas.sh
[2026-03-05 23:37:58] drwxrwx--x. 2 boinc boinc      4096 Mar  5 20:16 shared
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc    597959 Mar  5 20:16 input.tar.gz
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc         0 Mar  5 20:16 boinc_lockfile
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc      2562 Mar  5 20:16 pandaJob.out
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc    998478 Mar  5 20:16 agis_schedconf.cvmfs.json
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc       443 Mar  5 20:16 workernode_map.json
[2026-03-05 23:37:58] drwx------. 5 boinc boinc      4096 Mar  5 20:16 pilot3
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc 213579847 Mar  5 23:36 HITS.48838586._005715.pool.root.1
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc       529 Mar  5 23:36 boinc_task_state.xml
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc      1029 Mar  5 23:37 memory_monitor_summary.json
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc   1521291 Mar  5 23:37 agis_ddmendpoints.agis.ALL.json
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc    375563 Mar  5 23:37 log.48838586._005715.job.log.tgz.1
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc      6354 Mar  5 23:37 heartbeat.json
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc        95 Mar  5 23:37 pilot_heartbeat.json
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc      8192 Mar  5 23:37 boinc_mmap_file
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc        27 Mar  5 23:37 wrapper_checkpoint.txt
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc      4829 Mar  5 23:37 pilotlog.txt
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc   1649675 Mar  5 23:37 log.48838586._005715.job.log.1
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc       357 Mar  5 23:37 output.list
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc       620 Mar  5 23:37 runtime_log
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc   2048000 Mar  5 23:37 result.tar.gz
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc      9205 Mar  5 23:37 runtime_log.err
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc       666 Mar  5 23:37 MvSLDmfi7H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqkLLDmz0xMOm.diag
[2026-03-05 23:37:58] -rw-r--r--. 1 boinc boinc     20971 Mar  5 23:37 stderr.txt
[2026-03-05 23:37:58] HITS file was successfully produced:
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc 213579847 Mar  5 23:36 shared/HITS.pool.root.1
[2026-03-05 23:37:58]  *** Contents of shared directory: ***
[2026-03-05 23:37:58] total 480512
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc 275787990 Mar  5 20:16 ATLAS.root_0
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc     15845 Mar  5 20:16 start_atlas.sh
[2026-03-05 23:37:58] -rw-r--r--. 2 boinc boinc    597959 Mar  5 20:16 input.tar.gz
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc 213579847 Mar  5 23:36 HITS.pool.root.1
[2026-03-05 23:37:58] -rw-------. 1 boinc boinc   2048000 Mar  5 23:37 result.tar.gz
23:37:59 (448056): run_atlas exited; CPU time 46245.406998
23:37:59 (448056): called boinc_finish(0)

</stderr_txt>
]]>

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